RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 NKTRP30414 1462 aaKnown RBP33.63■■■□□ 2.97
PCMT1-201ENST00000367378 POTEAQ6S8J7 498 aa33.61■■■□□ 2.97
PCMT1-201ENST00000367378 BCANQ96GW7 911 aa33.6■■■□□ 2.97
PCMT1-201ENST00000367378 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
PCMT1-201ENST00000367378 CHD2O14647 1828 aaKnown RBP33.58■■■□□ 2.97
PCMT1-201ENST00000367378 ZFYVE9O95405 1425 aa33.57■■■□□ 2.96
PCMT1-201ENST00000367378 RPRD2Q5VT52 1461 aaKnown RBP33.56■■■□□ 2.96
PCMT1-201ENST00000367378 MSH6P52701 1360 aa33.56■■■□□ 2.96
PCMT1-201ENST00000367378 ANKRD50Q9ULJ7 1429 aa33.54■■■□□ 2.96
PCMT1-201ENST00000367378 PHLPP1O60346 1717 aa33.53■■■□□ 2.96
PCMT1-201ENST00000367378 TMEM131LA2VDJ0 1609 aa33.53■■■□□ 2.96
PCMT1-201ENST00000367378 PLEKHG1Q9ULL1 1385 aa33.52■■■□□ 2.96
PCMT1-201ENST00000367378 FAM50AQ14320 339 aaKnown RBP33.52■■■□□ 2.96
PCMT1-201ENST00000367378 SLAIN2Q9P270 581 aa33.52■■■□□ 2.96
PCMT1-201ENST00000367378 RIMS2Q9UQ26 1411 aa33.51■■■□□ 2.95
PCMT1-201ENST00000367378 PPP1R15AO75807 674 aaPredicted RBP33.46■■■□□ 2.95
PCMT1-201ENST00000367378 UNC13BO14795 1591 aa33.43■■■□□ 2.94
PCMT1-201ENST00000367378 HDGFP51858 240 aaKnown RBP33.42■■■□□ 2.94
PCMT1-201ENST00000367378 TBX22Q9Y458 520 aa33.42■■■□□ 2.94
PCMT1-201ENST00000367378 JCADQ9P266 1359 aa33.42■■■□□ 2.94
PCMT1-201ENST00000367378 COL16A1Q07092 1604 aaPredicted RBP33.41■■■□□ 2.94
PCMT1-201ENST00000367378 E9PCH4 1651 aa33.41■■■□□ 2.94
PCMT1-201ENST00000367378 SETD1AO15047 1707 aaKnown RBP33.39■■■□□ 2.94
PCMT1-201ENST00000367378 CHGAP10645 457 aaKnown RBP33.39■■■□□ 2.94
PCMT1-201ENST00000367378 NUTM2DQ5VT03 806 aaPredicted RBP33.38■■■□□ 2.93
PCMT1-201ENST00000367378 ADAMTS13Q76LX8 1427 aa33.37■■■□□ 2.93
PCMT1-201ENST00000367378 NCOA3Q9Y6Q9 1424 aa33.36■■■□□ 2.93
PCMT1-201ENST00000367378 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.35■■■□□ 2.93
PCMT1-201ENST00000367378 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.35■■■□□ 2.93
PCMT1-201ENST00000367378 DIP2AQ14689 1571 aa33.31■■■□□ 2.92
PCMT1-201ENST00000367378 C14orf37Q86TY3 774 aa33.31■■■□□ 2.92
PCMT1-201ENST00000367378 LRP6O75581 1613 aa33.31■■■□□ 2.92
PCMT1-201ENST00000367378 IQGAP3Q86VI3 1631 aa33.3■■■□□ 2.92
PCMT1-201ENST00000367378 PIK3R4Q99570 1358 aa33.26■■■□□ 2.92
PCMT1-201ENST00000367378 C19orf44Q9H6X5 657 aa33.26■■■□□ 2.91
PCMT1-201ENST00000367378 AHDC1Q5TGY3 1603 aaPredicted RBP33.26■■■□□ 2.91
PCMT1-201ENST00000367378 CADPS2Q86UW7 1296 aa33.25■■■□□ 2.91
PCMT1-201ENST00000367378 SPATA31A6Q5VVP1 1343 aa33.24■■■□□ 2.91
PCMT1-201ENST00000367378 ROCK1Q13464 1354 aa33.23■■■□□ 2.91
PCMT1-201ENST00000367378 PTPRUQ92729 1446 aa33.23■■■□□ 2.91
PCMT1-201ENST00000367378 SHPRHQ149N8 1683 aa33.23■■■□□ 2.91
PCMT1-201ENST00000367378 TRPM2O94759 1503 aa33.23■■■□□ 2.91
PCMT1-201ENST00000367378 ATF3P18847 181 aa33.22■■■□□ 2.91
PCMT1-201ENST00000367378 AMOTL2Q9Y2J4 779 aa33.2■■■□□ 2.91
PCMT1-201ENST00000367378 MEX3CQ5U5Q3 659 aaKnown RBP33.18■■■□□ 2.9
PCMT1-201ENST00000367378 NUP155O75694 1391 aa33.18■■■□□ 2.9
PCMT1-201ENST00000367378 NRXN3Q9Y4C0 1643 aa33.16■■■□□ 2.9
PCMT1-201ENST00000367378 BRINP3Q76B58 766 aa33.15■■■□□ 2.9
PCMT1-201ENST00000367378 ZNF772Q68DY9 489 aaPredicted RBP33.13■■■□□ 2.89
PCMT1-201ENST00000367378 XRN1Q8IZH2 1706 aaKnown RBP33.12■■■□□ 2.89
PCMT1-201ENST00000367378 SPHKAPQ2M3C7 1700 aa33.09■■■□□ 2.89
PCMT1-201ENST00000367378 ITGAEP38570 1179 aa33.09■■■□□ 2.89
PCMT1-201ENST00000367378 TRIM52Q96A61 297 aa33.09■■■□□ 2.89
PCMT1-201ENST00000367378 SETBP1Q9Y6X0 1596 aa33.09■■■□□ 2.89
PCMT1-201ENST00000367378 DCCP43146 1447 aa33.08■■■□□ 2.89
PCMT1-201ENST00000367378 ASXL1Q8IXJ9 1541 aa33.07■■■□□ 2.88
PCMT1-201ENST00000367378 NUTM2BA6NNL0 878 aaPredicted RBP33.06■■■□□ 2.88
PCMT1-201ENST00000367378 NUTM2EB1AL46 878 aaPredicted RBP33.06■■■□□ 2.88
PCMT1-201ENST00000367378 NUTM2AQ8IVF1 878 aaPredicted RBP33.06■■■□□ 2.88
PCMT1-201ENST00000367378 UPF1Q92900 1129 aaKnown RBP eCLIP33.05■■■□□ 2.88
PCMT1-201ENST00000367378 MST1RQ04912 1400 aa33.04■■■□□ 2.88
PCMT1-201ENST00000367378 NHSL1Q5SYE7 1610 aa33.03■■■□□ 2.88
PCMT1-201ENST00000367378 METP08581 1390 aa33.02■■■□□ 2.88
PCMT1-201ENST00000367378 RXRBP28702 533 aa33■■■□□ 2.87
PCMT1-201ENST00000367378 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
PCMT1-201ENST00000367378 SETD5Q9C0A6 1442 aa33■■■□□ 2.87
PCMT1-201ENST00000367378 AFF2P51816 1311 aa32.96■■■□□ 2.87
PCMT1-201ENST00000367378 NALCNQ8IZF0 1738 aa32.95■■■□□ 2.87
PCMT1-201ENST00000367378 NEXMIFQ5QGS0 1516 aa32.94■■■□□ 2.86
PCMT1-201ENST00000367378 DDX17Q92841 729 aaKnown RBP32.94■■■□□ 2.86
PCMT1-201ENST00000367378 CLTCL1P53675 1640 aa32.94■■■□□ 2.86
PCMT1-201ENST00000367378 PPARGC1BQ86YN6 1023 aaKnown RBP32.93■■■□□ 2.86
PCMT1-201ENST00000367378 ADGRL3Q9HAR2 1447 aa32.93■■■□□ 2.86
PCMT1-201ENST00000367378 CDK12Q9NYV4 1490 aaPredicted RBP32.93■■■□□ 2.86
PCMT1-201ENST00000367378 LRRC59Q96AG4 307 aaKnown RBP32.91■■■□□ 2.86
PCMT1-201ENST00000367378 PNPLA6Q8IY17 1366 aa32.87■■■□□ 2.85
PCMT1-201ENST00000367378 KIF1BO60333 1816 aa32.86■■■□□ 2.85
PCMT1-201ENST00000367378 C8orf37Q96NL8 207 aa32.85■■■□□ 2.85
PCMT1-201ENST00000367378 C1orf167Q5SNV9 1468 aa32.81■■■□□ 2.84
PCMT1-201ENST00000367378 RGS12O14924 1447 aa32.8■■■□□ 2.84
PCMT1-201ENST00000367378 QTRT2Q9H974 415 aaKnown RBP32.8■■■□□ 2.84
PCMT1-201ENST00000367378 LAMC1P11047 1609 aa32.78■■■□□ 2.84
PCMT1-201ENST00000367378 RBM6P78332 1123 aaKnown RBP32.76■■■□□ 2.83
PCMT1-201ENST00000367378 PTCH1Q13635 1447 aa32.75■■■□□ 2.83
PCMT1-201ENST00000367378 ROBO2Q9HCK4 1378 aa32.74■■■□□ 2.83
PCMT1-201ENST00000367378 ADAMTS2O95450 1211 aa32.73■■■□□ 2.83
PCMT1-201ENST00000367378 ORAI2Q96SN7 254 aa32.73■■■□□ 2.83
PCMT1-201ENST00000367378 NAIPQ13075 1403 aa32.72■■■□□ 2.83
PCMT1-201ENST00000367378 NGLY1Q96IV0 654 aa32.71■■■□□ 2.83
PCMT1-201ENST00000367378 SOS2Q07890 1332 aaPredicted RBP32.7■■■□□ 2.82
PCMT1-201ENST00000367378 VGFO15240 615 aaPredicted RBP32.69■■■□□ 2.82
PCMT1-201ENST00000367378 PRAG1Q86YV5 1406 aa32.65■■■□□ 2.82
PCMT1-201ENST00000367378 RRBP1Q9P2E9 1410 aaKnown RBP32.65■■■□□ 2.82
PCMT1-201ENST00000367378 PPLO60437 1756 aa32.65■■■□□ 2.82
PCMT1-201ENST00000367378 RPGRIP1LQ68CZ1 1315 aa32.61■■■□□ 2.81
PCMT1-201ENST00000367378 USP21Q9UK80 565 aa32.61■■■□□ 2.81
PCMT1-201ENST00000367378 COL22A1Q8NFW1 1626 aaPredicted RBP32.61■■■□□ 2.81
PCMT1-201ENST00000367378 HFM1A2PYH4 1435 aa32.59■■■□□ 2.81
PCMT1-201ENST00000367378 FNBP4Q8N3X1 1017 aaPredicted RBP32.56■■■□□ 2.8
PCMT1-201ENST00000367378 TRPC5Q9UL62 973 aaPredicted RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms