RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
RNU4-40P-201ENST00000364351 ZPR1O75312 459 aa13.02□□□□□ -0.33
RNU4-40P-201ENST00000364351 GFRA3O60609 400 aa13.01□□□□□ -0.33
RNU4-40P-201ENST00000364351 GGCXP38435 758 aa13.01□□□□□ -0.33
RNU4-40P-201ENST00000364351 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
RNU4-40P-201ENST00000364351 BLOC1S3Q6QNY0 202 aa13□□□□□ -0.33
RNU4-40P-201ENST00000364351 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
RNU4-40P-201ENST00000364351 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
RNU4-40P-201ENST00000364351 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
RNU4-40P-201ENST00000364351 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
RNU4-40P-201ENST00000364351 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
RNU4-40P-201ENST00000364351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
RNU4-40P-201ENST00000364351 OATP04181 439 aa12.96□□□□□ -0.33
RNU4-40P-201ENST00000364351 CFHP08603 1231 aa12.96□□□□□ -0.33
RNU4-40P-201ENST00000364351 HIC1Q14526 733 aa12.95□□□□□ -0.34
RNU4-40P-201ENST00000364351 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
RNU4-40P-201ENST00000364351 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
RNU4-40P-201ENST00000364351 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
RNU4-40P-201ENST00000364351 SLC10A3P09131 477 aa12.93□□□□□ -0.34
RNU4-40P-201ENST00000364351 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
RNU4-40P-201ENST00000364351 TLL1O43897 1013 aa12.92□□□□□ -0.34
RNU4-40P-201ENST00000364351 FECHP22830 423 aa12.9□□□□□ -0.34
RNU4-40P-201ENST00000364351 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
RNU4-40P-201ENST00000364351 GNPATO15228 680 aa12.89□□□□□ -0.35
RNU4-40P-201ENST00000364351 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
RNU4-40P-201ENST00000364351 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
RNU4-40P-201ENST00000364351 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
RNU4-40P-201ENST00000364351 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
RNU4-40P-201ENST00000364351 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
RNU4-40P-201ENST00000364351 NR1I2O75469 434 aa12.85□□□□□ -0.35
RNU4-40P-201ENST00000364351 LCE2BO14633 110 aa12.84□□□□□ -0.35
RNU4-40P-201ENST00000364351 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
RNU4-40P-201ENST00000364351 S1PR4O95977 384 aa12.84□□□□□ -0.35
RNU4-40P-201ENST00000364351 GPR37O15354 613 aa12.83□□□□□ -0.36
RNU4-40P-201ENST00000364351 SLC19A1P41440 591 aa12.83□□□□□ -0.36
RNU4-40P-201ENST00000364351 PUS10Q3MIT2 529 aaKnown RBP12.82□□□□□ -0.36
RNU4-40P-201ENST00000364351 ADH1BP00325 375 aa12.81□□□□□ -0.36
RNU4-40P-201ENST00000364351 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
RNU4-40P-201ENST00000364351 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
RNU4-40P-201ENST00000364351 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
RNU4-40P-201ENST00000364351 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
RNU4-40P-201ENST00000364351 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
RNU4-40P-201ENST00000364351 RDH13Q8NBN7 331 aa12.8□□□□□ -0.36
RNU4-40P-201ENST00000364351 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
RNU4-40P-201ENST00000364351 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
RNU4-40P-201ENST00000364351 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
RNU4-40P-201ENST00000364351 SLC6A16Q9GZN6 736 aa12.77□□□□□ -0.37
RNU4-40P-201ENST00000364351 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
RNU4-40P-201ENST00000364351 LIAT1Q6ZQX7 453 aa12.74□□□□□ -0.37
RNU4-40P-201ENST00000364351 PHOX2BQ99453 314 aa12.74□□□□□ -0.37
RNU4-40P-201ENST00000364351 SPSB2Q99619 263 aa12.74□□□□□ -0.37
RNU4-40P-201ENST00000364351 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
RNU4-40P-201ENST00000364351 ZNF598Q86UK7 904 aaKnown RBP12.72□□□□□ -0.37
RNU4-40P-201ENST00000364351 FUT2Q10981 343 aa12.71□□□□□ -0.37
RNU4-40P-201ENST00000364351 MORN1Q5T089 497 aa12.7□□□□□ -0.38
RNU4-40P-201ENST00000364351 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
RNU4-40P-201ENST00000364351 ATP6V1AP38606 617 aa12.69□□□□□ -0.38
RNU4-40P-201ENST00000364351 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
RNU4-40P-201ENST00000364351 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
RNU4-40P-201ENST00000364351 GCGRP47871 477 aa12.68□□□□□ -0.38
RNU4-40P-201ENST00000364351 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
RNU4-40P-201ENST00000364351 TNFRSF10AO00220 468 aa12.64□□□□□ -0.39
RNU4-40P-201ENST00000364351 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
RNU4-40P-201ENST00000364351 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
RNU4-40P-201ENST00000364351 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
RNU4-40P-201ENST00000364351 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 PRR20EP86478 221 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 PRR20CP86479 221 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 PRR20DP86480 221 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 PRR20BP86481 221 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 PRR20AP86496 221 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 ZNF787Q6DD87 383 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
RNU4-40P-201ENST00000364351 GDF9O60383 454 aa12.61□□□□□ -0.39
RNU4-40P-201ENST00000364351 DGAT1O75907 488 aa12.6□□□□□ -0.39
RNU4-40P-201ENST00000364351 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
RNU4-40P-201ENST00000364351 FAM160A2Q8N612 972 aaPredicted RBP12.6□□□□□ -0.39
RNU4-40P-201ENST00000364351 FCF1Q9Y324 198 aaKnown RBP12.6□□□□□ -0.39
RNU4-40P-201ENST00000364351 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
RNU4-40P-201ENST00000364351 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
RNU4-40P-201ENST00000364351 FOXC1Q12948 553 aa12.58□□□□□ -0.4
RNU4-40P-201ENST00000364351 BRICD5Q6PL45 260 aa12.58□□□□□ -0.4
RNU4-40P-201ENST00000364351 IRF6O14896 467 aa12.57□□□□□ -0.4
RNU4-40P-201ENST00000364351 MYT1Q01538 1121 aa12.57□□□□□ -0.4
RNU4-40P-201ENST00000364351 PRDM9Q9NQV7 894 aa12.57□□□□□ -0.4
RNU4-40P-201ENST00000364351 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
RNU4-40P-201ENST00000364351 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
RNU4-40P-201ENST00000364351 CD46P15529 392 aa12.55□□□□□ -0.4
RNU4-40P-201ENST00000364351 RPIAP49247 311 aa12.55□□□□□ -0.4
RNU4-40P-201ENST00000364351 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
RNU4-40P-201ENST00000364351 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
RNU4-40P-201ENST00000364351 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
RNU4-40P-201ENST00000364351 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
RNU4-40P-201ENST00000364351 KDM4AO75164 1064 aa12.51□□□□□ -0.41
RNU4-40P-201ENST00000364351 Q3C1V9 767 aa12.5□□□□□ -0.41
RNU4-40P-201ENST00000364351 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
RNU4-40P-201ENST00000364351 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
RNU4-40P-201ENST00000364351 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
RNU4-40P-201ENST00000364351 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
RNU4-40P-201ENST00000364351 HLA-CQ95604 372 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms