RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
SCAF1-201ENST00000360565 DIAPH1O60610 1272 aaKnown RBP20.49■□□□□ 0.87
SCAF1-201ENST00000360565 RIPK4P57078 832 aa20.49■□□□□ 0.87
SCAF1-201ENST00000360565 DZIP1LQ8IYY4 767 aaKnown RBP20.48■□□□□ 0.87
SCAF1-201ENST00000360565 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
SCAF1-201ENST00000360565 PTPRKQ15262 1439 aa20.48■□□□□ 0.87
SCAF1-201ENST00000360565 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
SCAF1-201ENST00000360565 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
SCAF1-201ENST00000360565 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
SCAF1-201ENST00000360565 FGD1P98174 961 aa20.47■□□□□ 0.87
SCAF1-201ENST00000360565 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
SCAF1-201ENST00000360565 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
SCAF1-201ENST00000360565 URB2Q14146 1524 aaKnown RBP20.47■□□□□ 0.87
SCAF1-201ENST00000360565 TCP11L2Q8N4U5 519 aa20.47■□□□□ 0.87
SCAF1-201ENST00000360565 CABP2Q9NPB3 220 aa20.47■□□□□ 0.87
SCAF1-201ENST00000360565 COG3Q96JB2 828 aa20.46■□□□□ 0.87
SCAF1-201ENST00000360565 AMPHP49418 695 aa20.45■□□□□ 0.86
SCAF1-201ENST00000360565 HMMRO75330 724 aa20.45■□□□□ 0.86
SCAF1-201ENST00000360565 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
SCAF1-201ENST00000360565 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
SCAF1-201ENST00000360565 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
SCAF1-201ENST00000360565 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
SCAF1-201ENST00000360565 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
SCAF1-201ENST00000360565 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
SCAF1-201ENST00000360565 GSE1Q14687 1217 aa20.42■□□□□ 0.86
SCAF1-201ENST00000360565 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
SCAF1-201ENST00000360565 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
SCAF1-201ENST00000360565 GOLGA6L3A6NEY3 463 aa20.41■□□□□ 0.86
SCAF1-201ENST00000360565 ZRSR1Q15695 479 aaKnown RBP20.41■□□□□ 0.86
SCAF1-201ENST00000360565 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
SCAF1-201ENST00000360565 TAOK2Q9UL54 1235 aa20.4■□□□□ 0.86
SCAF1-201ENST00000360565 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
SCAF1-201ENST00000360565 TRIM6-TRIM34B2RNG4 842 aa20.4■□□□□ 0.86
SCAF1-201ENST00000360565 RPRD2Q5VT52 1461 aaKnown RBP20.4■□□□□ 0.86
SCAF1-201ENST00000360565 BCAR3O75815 825 aa20.4■□□□□ 0.86
SCAF1-201ENST00000360565 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
SCAF1-201ENST00000360565 NAP1L2Q9ULW6 460 aaPredicted RBP20.39■□□□□ 0.85
SCAF1-201ENST00000360565 HMOX1P09601 288 aa20.38■□□□□ 0.85
SCAF1-201ENST00000360565 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
SCAF1-201ENST00000360565 GOLGA6L4A6NEF3 574 aa20.37■□□□□ 0.85
SCAF1-201ENST00000360565 PLEKHH2Q8IVE3 1493 aa20.36■□□□□ 0.85
SCAF1-201ENST00000360565 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
SCAF1-201ENST00000360565 MSNP26038 577 aaKnown RBP20.35■□□□□ 0.85
SCAF1-201ENST00000360565 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
SCAF1-201ENST00000360565 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
SCAF1-201ENST00000360565 PTMSP20962 102 aa20.33■□□□□ 0.85
SCAF1-201ENST00000360565 GRIN2AQ12879 1464 aa20.33■□□□□ 0.85
SCAF1-201ENST00000360565 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.84
SCAF1-201ENST00000360565 NFKBIBQ15653 356 aa20.32■□□□□ 0.84
SCAF1-201ENST00000360565 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
SCAF1-201ENST00000360565 CCDC141Q6ZP82 1450 aa20.32■□□□□ 0.84
SCAF1-201ENST00000360565 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
SCAF1-201ENST00000360565 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
SCAF1-201ENST00000360565 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.3■□□□□ 0.84
SCAF1-201ENST00000360565 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
SCAF1-201ENST00000360565 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
SCAF1-201ENST00000360565 EXOSC9Q06265 439 aaKnown RBP20.29■□□□□ 0.84
SCAF1-201ENST00000360565 FAM69CQ0P6D2 419 aa20.29■□□□□ 0.84
SCAF1-201ENST00000360565 ST18O60284 1047 aa20.29■□□□□ 0.84
SCAF1-201ENST00000360565 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
SCAF1-201ENST00000360565 AAMPQ13685 434 aa20.29■□□□□ 0.84
SCAF1-201ENST00000360565 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
SCAF1-201ENST00000360565 GNAI1P63096 354 aa20.28■□□□□ 0.84
SCAF1-201ENST00000360565 MSH5O43196 834 aa20.27■□□□□ 0.84
SCAF1-201ENST00000360565 FOXD4L5Q5VV16 416 aaPredicted RBP20.27■□□□□ 0.84
SCAF1-201ENST00000360565 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.84
SCAF1-201ENST00000360565 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
SCAF1-201ENST00000360565 DDX11L8A8MPP1 907 aa20.26■□□□□ 0.83
SCAF1-201ENST00000360565 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
SCAF1-201ENST00000360565 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
SCAF1-201ENST00000360565 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
SCAF1-201ENST00000360565 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
SCAF1-201ENST00000360565 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
SCAF1-201ENST00000360565 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
SCAF1-201ENST00000360565 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
SCAF1-201ENST00000360565 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
SCAF1-201ENST00000360565 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
SCAF1-201ENST00000360565 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
SCAF1-201ENST00000360565 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
SCAF1-201ENST00000360565 ZNF330Q9Y3S2 320 aaPredicted RBP20.23■□□□□ 0.83
SCAF1-201ENST00000360565 DDX49Q9Y6V7 483 aaKnown RBP20.22■□□□□ 0.83
SCAF1-201ENST00000360565 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
SCAF1-201ENST00000360565 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
SCAF1-201ENST00000360565 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
SCAF1-201ENST00000360565 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.19■□□□□ 0.82
SCAF1-201ENST00000360565 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
SCAF1-201ENST00000360565 GPATCH3Q96I76 525 aa20.19■□□□□ 0.82
SCAF1-201ENST00000360565 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
SCAF1-201ENST00000360565 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
SCAF1-201ENST00000360565 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
SCAF1-201ENST00000360565 FKBP5Q13451 457 aaPredicted RBP20.18■□□□□ 0.82
SCAF1-201ENST00000360565 TEFQ10587 303 aa20.17■□□□□ 0.82
SCAF1-201ENST00000360565 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
SCAF1-201ENST00000360565 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
SCAF1-201ENST00000360565 FOXD4L6Q3SYB3 417 aaPredicted RBP20.16■□□□□ 0.82
SCAF1-201ENST00000360565 FOXD4L3Q6VB84 417 aaPredicted RBP20.16■□□□□ 0.82
SCAF1-201ENST00000360565 REC8O95072 547 aa20.16■□□□□ 0.82
SCAF1-201ENST00000360565 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
SCAF1-201ENST00000360565 KIF14Q15058 1648 aa20.15■□□□□ 0.82
SCAF1-201ENST00000360565 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms