RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 C8orf37Q96NL8 207 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 ATP10BO94823 1461 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 TSPOAP1O95153 1857 aa9.04□□□□□ -0.96
RAB5B-201ENST00000360299 FAM135AQ9P2D6 1515 aa9.03□□□□□ -0.96
RAB5B-201ENST00000360299 BECN1Q14457 450 aa9.03□□□□□ -0.96
RAB5B-201ENST00000360299 CHD1O14646 1710 aa9.03□□□□□ -0.96
RAB5B-201ENST00000360299 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.96
RAB5B-201ENST00000360299 AMOTL2Q9Y2J4 779 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 G3V3G9 751 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 DCAF8Q5TAQ9 597 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 TOM1L2Q6ZVM7 507 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 HFM1A2PYH4 1435 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 NAIPQ13075 1403 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 PRAM1Q96QH2 718 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 KDM6BO15054 1643 aa9.02□□□□□ -0.97
RAB5B-201ENST00000360299 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
RAB5B-201ENST00000360299 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
RAB5B-201ENST00000360299 DISP1Q96F81 1524 aa9.01□□□□□ -0.97
RAB5B-201ENST00000360299 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
RAB5B-201ENST00000360299 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
RAB5B-201ENST00000360299 USP47Q96K76 1375 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 RAPGEF4Q8WZA2 1011 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 PLCH2O75038 1416 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
RAB5B-201ENST00000360299 GOLGA2Q08379 1002 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 CASC1Q6TDU7 716 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 ZNF518AQ6AHZ1 1483 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 FOXO3O43524 673 aa9□□□□□ -0.97
RAB5B-201ENST00000360299 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
RAB5B-201ENST00000360299 IDI1Q13907 227 aa8.99□□□□□ -0.97
RAB5B-201ENST00000360299 CFAP70Q5T0N1 1121 aa8.99□□□□□ -0.97
RAB5B-201ENST00000360299 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
RAB5B-201ENST00000360299 ZC3H6P61129 1189 aaKnown RBP8.99□□□□□ -0.97
RAB5B-201ENST00000360299 NGEFQ8N5V2 710 aa8.99□□□□□ -0.97
RAB5B-201ENST00000360299 MYBBP1AQ9BQG0 1328 aaKnown RBP8.99□□□□□ -0.97
RAB5B-201ENST00000360299 KIAA0556O60303 1618 aa8.99□□□□□ -0.97
RAB5B-201ENST00000360299 TCOF1Q13428 1488 aaKnown RBP8.98□□□□□ -0.97
RAB5B-201ENST00000360299 U2AF1L5P0DN76 240 aaPredicted RBP8.98□□□□□ -0.97
RAB5B-201ENST00000360299 U2AF1Q01081 240 aaKnown RBP eCLIP8.98□□□□□ -0.97
RAB5B-201ENST00000360299 FRAT1Q92837 279 aaPredicted RBP8.98□□□□□ -0.97
RAB5B-201ENST00000360299 CFAP44Q96MT7 982 aa8.98□□□□□ -0.97
RAB5B-201ENST00000360299 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
RAB5B-201ENST00000360299 ZMYM3Q14202 1370 aa8.98□□□□□ -0.97
RAB5B-201ENST00000360299 KDM5BQ9UGL1 1544 aa8.98□□□□□ -0.97
RAB5B-201ENST00000360299 RAPGEF6Q8TEU7 1601 aa8.98□□□□□ -0.97
RAB5B-201ENST00000360299 DISP3Q9P2K9 1392 aa8.97□□□□□ -0.97
RAB5B-201ENST00000360299 CENPJQ9HC77 1338 aaPredicted RBP8.97□□□□□ -0.97
RAB5B-201ENST00000360299 RIMBP3CA6NJZ7 1639 aa8.97□□□□□ -0.97
RAB5B-201ENST00000360299 RIMBP3BA6NNM3 1639 aa8.97□□□□□ -0.97
RAB5B-201ENST00000360299 RIMBP3Q9UFD9 1639 aa8.97□□□□□ -0.97
RAB5B-201ENST00000360299 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
RAB5B-201ENST00000360299 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.97
RAB5B-201ENST00000360299 LMOD3Q0VAK6 560 aa8.96□□□□□ -0.97
RAB5B-201ENST00000360299 DDX54Q8TDD1 881 aaKnown RBP8.96□□□□□ -0.97
RAB5B-201ENST00000360299 PRKRIP1Q9H875 184 aaPredicted RBP8.96□□□□□ -0.97
RAB5B-201ENST00000360299 DHX29Q7Z478 1369 aaKnown RBP8.96□□□□□ -0.98
RAB5B-201ENST00000360299 RCAN3Q9UKA8 241 aa8.96□□□□□ -0.98
RAB5B-201ENST00000360299 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
RAB5B-201ENST00000360299 PANK3Q9H999 370 aa8.95□□□□□ -0.98
RAB5B-201ENST00000360299 CGNL1Q0VF96 1302 aa8.95□□□□□ -0.98
RAB5B-201ENST00000360299 GCC2Q8IWJ2 1684 aa8.95□□□□□ -0.98
RAB5B-201ENST00000360299 TTC5Q8N0Z6 440 aa8.95□□□□□ -0.98
RAB5B-201ENST00000360299 CAMSAP2Q08AD1 1489 aa8.95□□□□□ -0.98
RAB5B-201ENST00000360299 ATP10AO60312 1499 aa8.94□□□□□ -0.98
RAB5B-201ENST00000360299 A2MP01023 1474 aa8.94□□□□□ -0.98
RAB5B-201ENST00000360299 WAPLQ7Z5K2 1190 aa8.94□□□□□ -0.98
RAB5B-201ENST00000360299 KIAA1107Q9UPP5 1409 aa8.94□□□□□ -0.98
RAB5B-201ENST00000360299 UHRF1BP1LA0JNW5 1464 aa8.93□□□□□ -0.98
RAB5B-201ENST00000360299 CNTLNQ9NXG0 1405 aa8.93□□□□□ -0.98
RAB5B-201ENST00000360299 DAPK1P53355 1430 aa8.93□□□□□ -0.98
RAB5B-201ENST00000360299 ABCC10Q5T3U5 1492 aa8.93□□□□□ -0.98
RAB5B-201ENST00000360299 TRAPPC8Q9Y2L5 1435 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 CDK19Q9BWU1 502 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 HDAC5Q9UQL6 1122 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 GOLGA6L22H0YM25 854 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 TEFQ10587 303 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 LRPPRCP42704 1394 aaKnown RBP8.92□□□□□ -0.98
RAB5B-201ENST00000360299 KRT28Q7Z3Y7 464 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 RBM42Q9BTD8 480 aaKnown RBP8.92□□□□□ -0.98
RAB5B-201ENST00000360299 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
RAB5B-201ENST00000360299 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
RAB5B-201ENST00000360299 CCDC7Q96M83 1385 aa8.91□□□□□ -0.98
RAB5B-201ENST00000360299 WASHC2AQ641Q2 1341 aa8.91□□□□□ -0.98
RAB5B-201ENST00000360299 RTEL1-TNFRSF6BF6WH68 1400 aa8.91□□□□□ -0.98
RAB5B-201ENST00000360299 RPGRIP1LQ68CZ1 1315 aa8.9□□□□□ -0.98
RAB5B-201ENST00000360299 ZFYVE16Q7Z3T8 1539 aa8.9□□□□□ -0.98
RAB5B-201ENST00000360299 OS9Q13438 667 aaPredicted RBP8.9□□□□□ -0.98
RAB5B-201ENST00000360299 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
RAB5B-201ENST00000360299 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
RAB5B-201ENST00000360299 ABCC5O15440 1437 aa8.9□□□□□ -0.98
RAB5B-201ENST00000360299 RWDD1Q9H446 243 aaPredicted RBP8.9□□□□□ -0.99
RAB5B-201ENST00000360299 LRRC59Q96AG4 307 aaKnown RBP8.9□□□□□ -0.99
RAB5B-201ENST00000360299 RGS3P49796 1198 aa8.89□□□□□ -0.99
RAB5B-201ENST00000360299 ZBED9Q6R2W3 1325 aa8.89□□□□□ -0.99
RAB5B-201ENST00000360299 CERKQ8TCT0 537 aa8.89□□□□□ -0.99
RAB5B-201ENST00000360299 SYCP2Q9BX26 1530 aa8.89□□□□□ -0.99
RAB5B-201ENST00000360299 NCLP19338 710 aaKnown RBP8.89□□□□□ -0.99
RAB5B-201ENST00000360299 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
RAB5B-201ENST00000360299 DNMT1P26358 1616 aaKnown RBP8.89□□□□□ -0.99
RAB5B-201ENST00000360299 ERCC6L2Q5T890 1561 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms