RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SAMD1Q6SPF0 538 aaPredicted RBP21■□□□□ 0.95
CACNA1A-201ENST00000360228 PDILTQ8N807 584 aa21■□□□□ 0.95
CACNA1A-201ENST00000360228 OFD1O75665 1012 aa21■□□□□ 0.95
CACNA1A-201ENST00000360228 LTV1Q96GA3 475 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 TSPYL1Q9H0U9 437 aa20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 SLC4A3P48751 1232 aa20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 CGNL1Q0VF96 1302 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 ERICH2A1L162 156 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 AMPHP49418 695 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 LEKR1Q6ZMV7 388 aa20.97■□□□□ 0.95
CACNA1A-201ENST00000360228 MSH5O43196 834 aa20.97■□□□□ 0.95
CACNA1A-201ENST00000360228 GOLGA6L7A0A1B0GV03 622 aa20.96■□□□□ 0.95
CACNA1A-201ENST00000360228 TRDNQ13061 729 aa20.96■□□□□ 0.95
CACNA1A-201ENST00000360228 ZKSCAN1P17029 563 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 SEPT7Q16181 437 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 NAT10Q9H0A0 1025 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ENOX2Q16206 610 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ERCC4Q92889 916 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ANKRD62A6NC57 917 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 DHX37Q8IY37 1157 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 USP8P40818 1118 aa20.94■□□□□ 0.94
CACNA1A-201ENST00000360228 AXDND1Q5T1B0 1012 aaPredicted RBP20.94■□□□□ 0.94
CACNA1A-201ENST00000360228 TAF3Q5VWG9 929 aa20.93■□□□□ 0.94
CACNA1A-201ENST00000360228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 REC8O95072 547 aa20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 VPS37CA5D8V6 355 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 DEF6Q9H4E7 631 aa20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 GOLGA6L10A6NI86 522 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 SAFBQ15424 915 aaKnown RBP eCLIP20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 TMEM132AQ24JP5 1023 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 CENPQQ7L2Z9 268 aaPredicted RBP20.89■□□□□ 0.94
CACNA1A-201ENST00000360228 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
CACNA1A-201ENST00000360228 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
CACNA1A-201ENST00000360228 GGT6Q6P531 493 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 RNF20Q5VTR2 975 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 FOXD1Q16676 465 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 CCDC73Q6ZRK6 1079 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 ERLIN2O94905 339 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 SYCP1Q15431 976 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 SMC3Q9UQE7 1217 aa20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 EVA1CP58658 441 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 NASPP49321 788 aaPredicted RBP20.83■□□□□ 0.92
CACNA1A-201ENST00000360228 CCDC39Q9UFE4 941 aa20.83■□□□□ 0.92
CACNA1A-201ENST00000360228 CENPHQ9H3R5 247 aa20.82■□□□□ 0.92
CACNA1A-201ENST00000360228 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
CACNA1A-201ENST00000360228 FYB1O15117 783 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 SMC2O95347 1197 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 SMARCE1Q969G3 411 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 PDE4AP27815 886 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 CCDC97Q96F63 343 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 GBP2P32456 591 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 MAGEC2Q9UBF1 373 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 NUTM2FA1L443 756 aa20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 EZRP15311 586 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 MTMR7Q9Y216 660 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 XBP1P17861 261 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 PKD2Q13563 968 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 TAX1BP1Q86VP1 789 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 NECTIN2Q92692 538 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 RALYLQ86SE5 291 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 CCAR1Q8IX12 1150 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 PLIN1O60240 522 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 TRIM5Q9C035 493 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 KDM4AO75164 1064 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 GIMAP7Q8NHV1 300 aa20.75■□□□□ 0.91
CACNA1A-201ENST00000360228 CCP110O43303 1012 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms