RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SAMD1Q6SPF0 538 aaPredicted RBP21■□□□□ 0.95
CACNA1A-201ENST00000360228 PDILTQ8N807 584 aa21■□□□□ 0.95
CACNA1A-201ENST00000360228 OFD1O75665 1012 aa21■□□□□ 0.95
CACNA1A-201ENST00000360228 LTV1Q96GA3 475 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 TSPYL1Q9H0U9 437 aa20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 SLC4A3P48751 1232 aa20.99■□□□□ 0.95
CACNA1A-201ENST00000360228 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 CGNL1Q0VF96 1302 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 ERICH2A1L162 156 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 AMPHP49418 695 aa20.98■□□□□ 0.95
CACNA1A-201ENST00000360228 LEKR1Q6ZMV7 388 aa20.97■□□□□ 0.95
CACNA1A-201ENST00000360228 MSH5O43196 834 aa20.97■□□□□ 0.95
CACNA1A-201ENST00000360228 GOLGA6L7A0A1B0GV03 622 aa20.96■□□□□ 0.95
CACNA1A-201ENST00000360228 TRDNQ13061 729 aa20.96■□□□□ 0.95
CACNA1A-201ENST00000360228 ZKSCAN1P17029 563 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 SEPT7Q16181 437 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 NAT10Q9H0A0 1025 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ENOX2Q16206 610 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ERCC4Q92889 916 aaPredicted RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 ANKRD62A6NC57 917 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 DHX37Q8IY37 1157 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
CACNA1A-201ENST00000360228 USP8P40818 1118 aa20.94■□□□□ 0.94
CACNA1A-201ENST00000360228 AXDND1Q5T1B0 1012 aaPredicted RBP20.94■□□□□ 0.94
CACNA1A-201ENST00000360228 TAF3Q5VWG9 929 aa20.93■□□□□ 0.94
CACNA1A-201ENST00000360228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 REC8O95072 547 aa20.92■□□□□ 0.94
CACNA1A-201ENST00000360228 VPS37CA5D8V6 355 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 DEF6Q9H4E7 631 aa20.91■□□□□ 0.94
CACNA1A-201ENST00000360228 GOLGA6L10A6NI86 522 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 SAFBQ15424 915 aaKnown RBP eCLIP20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 TMEM132AQ24JP5 1023 aa20.9■□□□□ 0.94
CACNA1A-201ENST00000360228 CENPQQ7L2Z9 268 aaPredicted RBP20.89■□□□□ 0.94
CACNA1A-201ENST00000360228 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
CACNA1A-201ENST00000360228 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
CACNA1A-201ENST00000360228 GGT6Q6P531 493 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 RNF20Q5VTR2 975 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 FOXD1Q16676 465 aa20.88■□□□□ 0.93
CACNA1A-201ENST00000360228 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 CCDC73Q6ZRK6 1079 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
CACNA1A-201ENST00000360228 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 ERLIN2O94905 339 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 SYCP1Q15431 976 aa20.86■□□□□ 0.93
CACNA1A-201ENST00000360228 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 SMC3Q9UQE7 1217 aa20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-201ENST00000360228 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 EVA1CP58658 441 aa20.84■□□□□ 0.93
CACNA1A-201ENST00000360228 NASPP49321 788 aaPredicted RBP20.83■□□□□ 0.92
CACNA1A-201ENST00000360228 CCDC39Q9UFE4 941 aa20.83■□□□□ 0.92
CACNA1A-201ENST00000360228 CENPHQ9H3R5 247 aa20.82■□□□□ 0.92
CACNA1A-201ENST00000360228 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
CACNA1A-201ENST00000360228 FYB1O15117 783 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 SMC2O95347 1197 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 SMARCE1Q969G3 411 aa20.81■□□□□ 0.92
CACNA1A-201ENST00000360228 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 PDE4AP27815 886 aa20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
CACNA1A-201ENST00000360228 CCDC97Q96F63 343 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 GBP2P32456 591 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 MAGEC2Q9UBF1 373 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-201ENST00000360228 NUTM2FA1L443 756 aa20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 EZRP15311 586 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
CACNA1A-201ENST00000360228 MTMR7Q9Y216 660 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 XBP1P17861 261 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 PKD2Q13563 968 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 TAX1BP1Q86VP1 789 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 NECTIN2Q92692 538 aa20.77■□□□□ 0.92
CACNA1A-201ENST00000360228 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 RALYLQ86SE5 291 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 CCAR1Q8IX12 1150 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 PLIN1O60240 522 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 TRIM5Q9C035 493 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 KDM4AO75164 1064 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
CACNA1A-201ENST00000360228 GIMAP7Q8NHV1 300 aa20.75■□□□□ 0.91
CACNA1A-201ENST00000360228 CCP110O43303 1012 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms