RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 ILDR2Q71H61 639 aa42.45■■■■■ 4.39
LFNG-203ENST00000359574 SENP3Q9H4L4 574 aaPredicted RBP42.45■■■■■ 4.39
LFNG-203ENST00000359574 CHGAP10645 457 aaKnown RBP42.44■■■■■ 4.38
LFNG-203ENST00000359574 KCNA6P17658 529 aa42.44■■■■■ 4.38
LFNG-203ENST00000359574 BCANQ96GW7 911 aa42.44■■■■■ 4.38
LFNG-203ENST00000359574 PLEKHG1Q9ULL1 1385 aa42.41■■■■■ 4.38
LFNG-203ENST00000359574 PPP1R15AO75807 674 aaPredicted RBP42.4■■■■■ 4.38
LFNG-203ENST00000359574 HDGFP51858 240 aaKnown RBP42.38■■■■■ 4.37
LFNG-203ENST00000359574 MYO5BQ9ULV0 1848 aa42.37■■■■■ 4.37
LFNG-203ENST00000359574 TMEM94Q12767 1356 aa42.37■■■■■ 4.37
LFNG-203ENST00000359574 NAIPQ13075 1403 aa42.34■■■■■ 4.37
LFNG-203ENST00000359574 NUTM2DQ5VT03 806 aaPredicted RBP42.32■■■■■ 4.37
LFNG-203ENST00000359574 PROSER2Q86WR7 435 aaPredicted RBP42.32■■■■■ 4.37
LFNG-203ENST00000359574 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.32■■■■■ 4.37
LFNG-203ENST00000359574 XIRP1Q702N8 1843 aaKnown RBP42.32■■■■■ 4.36
LFNG-203ENST00000359574 RBM33Q96EV2 1170 aaKnown RBP42.31■■■■■ 4.36
LFNG-203ENST00000359574 NWD1Q149M9 1564 aa42.28■■■■■ 4.36
LFNG-203ENST00000359574 NKTRP30414 1462 aaKnown RBP42.28■■■■■ 4.36
LFNG-203ENST00000359574 TBX22Q9Y458 520 aa42.23■■■■■ 4.35
LFNG-203ENST00000359574 ADAMTS13Q76LX8 1427 aa42.21■■■■■ 4.35
LFNG-203ENST00000359574 HFM1A2PYH4 1435 aa42.19■■■■■ 4.34
LFNG-203ENST00000359574 MED1Q15648 1581 aaPredicted RBP42.17■■■■■ 4.34
LFNG-203ENST00000359574 SPHKAPQ2M3C7 1700 aa42.15■■■■■ 4.34
LFNG-203ENST00000359574 FAM135BQ49AJ0 1406 aa42.13■■■■■ 4.33
LFNG-203ENST00000359574 MSH6P52701 1360 aa42.09■■■■■ 4.33
LFNG-203ENST00000359574 DIP2AQ14689 1571 aa42.09■■■■■ 4.33
LFNG-203ENST00000359574 TRIM52Q96A61 297 aa42.09■■■■■ 4.33
LFNG-203ENST00000359574 CHD2O14647 1828 aaKnown RBP42.08■■■■■ 4.33
LFNG-203ENST00000359574 SOCS7O14512 581 aa42.07■■■■■ 4.33
LFNG-203ENST00000359574 ZNF326Q5BKZ1 582 aaKnown RBP42.07■■■■■ 4.33
LFNG-203ENST00000359574 TRPM2O94759 1503 aa42.06■■■■■ 4.32
LFNG-203ENST00000359574 PIK3R4Q99570 1358 aa42.05■■■■■ 4.32
LFNG-203ENST00000359574 CLTCL1P53675 1640 aa42.04■■■■■ 4.32
LFNG-203ENST00000359574 PTPRUQ92729 1446 aa41.98■■■■■ 4.31
LFNG-203ENST00000359574 SLC4A1APQ9BWU0 796 aaKnown RBP41.97■■■■■ 4.31
LFNG-203ENST00000359574 SLAIN2Q9P270 581 aa41.97■■■■■ 4.31
LFNG-203ENST00000359574 NCOA3Q9Y6Q9 1424 aa41.96■■■■■ 4.31
LFNG-203ENST00000359574 AMOTL2Q9Y2J4 779 aa41.96■■■■■ 4.31
LFNG-203ENST00000359574 ROBO1Q9Y6N7 1651 aa41.95■■■■■ 4.31
LFNG-203ENST00000359574 SETBP1Q9Y6X0 1596 aa41.95■■■■■ 4.31
LFNG-203ENST00000359574 NRXN3Q9Y4C0 1643 aa41.94■■■■■ 4.3
LFNG-203ENST00000359574 C14orf37Q86TY3 774 aa41.93■■■■■ 4.3
LFNG-203ENST00000359574 PHF23Q9BUL5 403 aaPredicted RBP41.91■■■■■ 4.3
LFNG-203ENST00000359574 NEXMIFQ5QGS0 1516 aa41.9■■■■■ 4.3
LFNG-203ENST00000359574 METP08581 1390 aa41.87■■■■■ 4.29
LFNG-203ENST00000359574 C19orf44Q9H6X5 657 aa41.85■■■■■ 4.29
LFNG-203ENST00000359574 FOXD1Q16676 465 aa41.82■■■■■ 4.29
LFNG-203ENST00000359574 CADPS2Q86UW7 1296 aa41.79■■■■■ 4.28
LFNG-203ENST00000359574 XRN1Q8IZH2 1706 aaKnown RBP41.79■■■■■ 4.28
LFNG-203ENST00000359574 ATF3P18847 181 aa41.78■■■■■ 4.28
LFNG-203ENST00000359574 KIF1BO60333 1816 aa41.77■■■■■ 4.28
LFNG-203ENST00000359574 SIPA1L2Q9P2F8 1722 aaPredicted RBP41.75■■■■■ 4.27
LFNG-203ENST00000359574 VGFO15240 615 aaPredicted RBP41.73■■■■■ 4.27
LFNG-203ENST00000359574 RPGRIP1LQ68CZ1 1315 aa41.71■■■■■ 4.27
LFNG-203ENST00000359574 MPHOSPH9Q99550 1183 aa41.69■■■■■ 4.26
LFNG-203ENST00000359574 DCCP43146 1447 aa41.67■■■■■ 4.26
LFNG-203ENST00000359574 RGS17Q9UGC6 210 aaPredicted RBP41.67■■■■■ 4.26
LFNG-203ENST00000359574 PHLPP1O60346 1717 aa41.66■■■■■ 4.26
LFNG-203ENST00000359574 JCADQ9P266 1359 aa41.62■■■■■ 4.25
LFNG-203ENST00000359574 CCDC144AA2RUR9 1427 aa41.62■■■■■ 4.25
LFNG-203ENST00000359574 BRINP3Q76B58 766 aa41.61■■■■■ 4.25
LFNG-203ENST00000359574 COL16A1Q07092 1604 aaPredicted RBP41.6■■■■■ 4.25
LFNG-203ENST00000359574 ADGRL3Q9HAR2 1447 aa41.58■■■■■ 4.25
LFNG-203ENST00000359574 SETD5Q9C0A6 1442 aa41.57■■■■■ 4.24
LFNG-203ENST00000359574 MST1RQ04912 1400 aa41.56■■■■■ 4.24
LFNG-203ENST00000359574 AHDC1Q5TGY3 1603 aaPredicted RBP41.56■■■■■ 4.24
LFNG-203ENST00000359574 SPATA31E1Q6ZUB1 1445 aa41.54■■■■■ 4.24
LFNG-203ENST00000359574 ROBO2Q9HCK4 1378 aa41.54■■■■■ 4.24
LFNG-203ENST00000359574 PPLO60437 1756 aa41.54■■■■■ 4.24
LFNG-203ENST00000359574 SETD1AO15047 1707 aaKnown RBP41.53■■■■■ 4.24
LFNG-203ENST00000359574 PTCH1Q13635 1447 aa41.53■■■■■ 4.24
LFNG-203ENST00000359574 RGL3Q3MIN7 710 aa41.53■■■■■ 4.24
LFNG-203ENST00000359574 ADGRF5Q8IZF2 1346 aa41.5■■■■■ 4.23
LFNG-203ENST00000359574 ASXL1Q8IXJ9 1541 aa41.48■■■■■ 4.23
LFNG-203ENST00000359574 PRAG1Q86YV5 1406 aa41.47■■■■■ 4.23
LFNG-203ENST00000359574 ACIN1Q9UKV3 1341 aaKnown RBP41.46■■■■■ 4.23
LFNG-203ENST00000359574 NALCNQ8IZF0 1738 aa41.45■■■■■ 4.23
LFNG-203ENST00000359574 POTEAQ6S8J7 498 aa41.44■■■■■ 4.22
LFNG-203ENST00000359574 RAB3GAP2Q9H2M9 1393 aa41.43■■■■■ 4.22
LFNG-203ENST00000359574 ANKRD30BQ9BXX2 1392 aa41.42■■■■■ 4.22
LFNG-203ENST00000359574 SPATA31A6Q5VVP1 1343 aa41.41■■■■■ 4.22
LFNG-203ENST00000359574 LRP6O75581 1613 aa41.39■■■■■ 4.22
LFNG-203ENST00000359574 DDX17Q92841 729 aaKnown RBP41.36■■■■■ 4.21
LFNG-203ENST00000359574 C1orf167Q5SNV9 1468 aa41.35■■■■■ 4.21
LFNG-203ENST00000359574 SHPRHQ149N8 1683 aa41.31■■■■■ 4.2
LFNG-203ENST00000359574 PIK3C2GO75747 1445 aa41.31■■■■■ 4.2
LFNG-203ENST00000359574 IFT172Q9UG01 1749 aa41.29■■■■■ 4.2
LFNG-203ENST00000359574 MEX3CQ5U5Q3 659 aaKnown RBP41.29■■■■■ 4.2
LFNG-203ENST00000359574 NHSL1Q5SYE7 1610 aa41.29■■■■■ 4.2
LFNG-203ENST00000359574 STK26Q9P289 416 aa41.28■■■■■ 4.2
LFNG-203ENST00000359574 TMEM132EQ6IEE7 984 aa41.26■■■■■ 4.2
LFNG-203ENST00000359574 LRPPRCP42704 1394 aaKnown RBP41.25■■■■■ 4.19
LFNG-203ENST00000359574 LRRC59Q96AG4 307 aaKnown RBP41.25■■■■■ 4.19
LFNG-203ENST00000359574 ORAI2Q96SN7 254 aa41.25■■■■■ 4.19
LFNG-203ENST00000359574 TECPR2O15040 1411 aa41.24■■■■■ 4.19
LFNG-203ENST00000359574 NUTM2BA6NNL0 878 aaPredicted RBP41.24■■■■■ 4.19
LFNG-203ENST00000359574 NUTM2EB1AL46 878 aaPredicted RBP41.24■■■■■ 4.19
LFNG-203ENST00000359574 NUTM2AQ8IVF1 878 aaPredicted RBP41.24■■■■■ 4.19
LFNG-203ENST00000359574 ABCC11Q96J66 1382 aa41.2■■■■■ 4.19
LFNG-203ENST00000359574 WAPLQ7Z5K2 1190 aa41.2■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms