RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 KIF12Q96FN5 646 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 PRDM16Q9HAZ2 1276 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 C19orf67A6NJJ6 358 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 RSPH4AQ5TD94 716 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 EYA1Q99502 592 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 LIMD1Q9UGP4 676 aa3.19□□□□□ -1.9
SMARCAD1-202ENST00000359052 HSP90B1P14625 803 aaKnown RBP3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 DSG2Q14126 1118 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 BCORL1Q5H9F3 1711 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 RAD21O60216 631 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 CYB5RLQ6IPT4 315 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 POTEB3A0JP26 581 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 ARHGAP4P98171 946 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 POTEBQ6S5H4 581 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 CFHR5Q9BXR6 569 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 CUEDC1Q9NWM3 386 aaPredicted RBP3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 RFC5P40937 340 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 DHX37Q8IY37 1157 aaKnown RBP3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 ARMC5Q96C12 935 aa3.18□□□□□ -1.9
SMARCAD1-202ENST00000359052 RANGAP1P46060 587 aaPredicted RBP3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 NME8Q8N427 588 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 EFCAB3Q8N7B9 438 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 PBXIP1Q96AQ6 731 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 GZF1Q9H116 711 aaPredicted RBP3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 SLC34A2O95436 690 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.17□□□□□ -1.94e-6■□□□□ 11.3
SMARCAD1-202ENST00000359052 BRPF3Q9ULD4 1205 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 KIF13AQ9H1H9 1805 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 TAS1R3Q7RTX0 852 aa3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 ZBTB12Q9Y330 459 aaPredicted RBP3.17□□□□□ -1.9
SMARCAD1-202ENST00000359052 SPDYE16A6NNV3 312 aaPredicted RBP3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 SPTLC1O15269 473 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 EIF5BO60841 1220 aaKnown RBP3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 PPP4CP60510 307 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 CBLBQ13191 982 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 DSC3Q14574 896 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 GLMNQ92990 594 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 TAGLNQ01995 201 aaKnown RBP3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 TRPC6Q9Y210 931 aa3.16□□□□□ -1.9
SMARCAD1-202ENST00000359052 TCF3P15923 654 aa3.15□□□□□ -1.9
SMARCAD1-202ENST00000359052 FAM198AQ9UFP1 575 aa3.15□□□□□ -1.9
SMARCAD1-202ENST00000359052 ATAD2BQ9ULI0 1458 aa3.15□□□□□ -1.9
SMARCAD1-202ENST00000359052 SOWAHDA6NJG2 315 aa3.15□□□□□ -1.91
SMARCAD1-202ENST00000359052 GNPATO15228 680 aa3.15□□□□□ -1.91
SMARCAD1-202ENST00000359052 ANKRD13DQ6ZTN6 518 aa3.15□□□□□ -1.91
SMARCAD1-202ENST00000359052 ZNF295-AS1Q8N0V1 137 aa3.15□□□□□ -1.91
SMARCAD1-202ENST00000359052 DDX27Q96GQ7 796 aaKnown RBP3.15□□□□□ -1.91
SMARCAD1-202ENST00000359052 ENPP3O14638 875 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 HMX1Q9NP08 348 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 ZNF777Q9ULD5 760 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 SIGLEC1Q9BZZ2 1709 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 ZBTB7CA1YPR0 619 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 POTEMA6NI47 508 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 POTEGQ6S5H5 508 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 PIP4P2Q8N4L2 257 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 L3MBTL3Q96JM7 780 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 RBM27Q9P2N5 1060 aaKnown RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 ZBTB47Q9UFB7 747 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 IRX5P78411 483 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 PLEKHM2Q8IWE5 1019 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 PXYLP1Q8TE99 480 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 UBE2Q2Q8WVN8 375 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 POTEJP0CG39 1038 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 ZNF746Q6NUN9 644 aaPredicted RBP3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 TRAF7Q6Q0C0 670 aa3.14□□□□□ -1.91
SMARCAD1-202ENST00000359052 IGF1RP08069 1367 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 MAP3K10Q02779 954 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PDAP1Q13442 181 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PRR7Q8TB68 274 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PIF1Q9H611 641 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 FAM83GA6ND36 823 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PTCD2Q8WV60 388 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PPP1R12CQ9BZL4 782 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 MAF1Q9H063 256 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 STK24Q9Y6E0 443 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 PYGBP11216 843 aa3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 FMR1Q06787 632 aaKnown RBP eCLIP3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 MRRFQ96E11 262 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-202ENST00000359052 KCNQ2O43526 872 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 CD46P15529 392 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 MCCD1P59942 119 aaPredicted RBP3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 HIC1Q14526 733 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 METTL3Q86U44 580 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 MAFBQ9Y5Q3 323 aaPredicted RBP3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 PTPN12Q05209 780 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 CERS3Q8IU89 383 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 CDHR5Q9HBB8 845 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 ADGRG1Q9Y653 693 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 CFTRP13569 1480 aa3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 HDLBPQ00341 1268 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-202ENST00000359052 SBNO2Q9Y2G9 1366 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 CLP1Q92989 425 aaKnown RBP3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 SPACA7Q96KW9 195 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 RIPOR2Q9Y4F9 1068 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 CECR2Q9BXF3 1484 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 LOC102724159A0A0B4J2E5 919 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 PPFIA4O75335 1185 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 EN1Q05925 392 aaPredicted RBP3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 PWP2Q15269 919 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms