RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 CHD2O14647 1828 aaKnown RBP20.66■□□□□ 0.9
FAM3B-201ENST00000357985 ROBO1Q9Y6N7 1651 aa20.65■□□□□ 0.9
FAM3B-201ENST00000357985 TMEM94Q12767 1356 aa20.64■□□□□ 0.89
FAM3B-201ENST00000357985 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
FAM3B-201ENST00000357985 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
FAM3B-201ENST00000357985 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
FAM3B-201ENST00000357985 KCNA6P17658 529 aa20.62■□□□□ 0.89
FAM3B-201ENST00000357985 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
FAM3B-201ENST00000357985 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
FAM3B-201ENST00000357985 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
FAM3B-201ENST00000357985 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
FAM3B-201ENST00000357985 RIMS2Q9UQ26 1411 aa20.6■□□□□ 0.89
FAM3B-201ENST00000357985 BCANQ96GW7 911 aa20.58■□□□□ 0.89
FAM3B-201ENST00000357985 SPHKAPQ2M3C7 1700 aa20.57■□□□□ 0.88
FAM3B-201ENST00000357985 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
FAM3B-201ENST00000357985 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
FAM3B-201ENST00000357985 MSH6P52701 1360 aa20.56■□□□□ 0.88
FAM3B-201ENST00000357985 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
FAM3B-201ENST00000357985 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
FAM3B-201ENST00000357985 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
FAM3B-201ENST00000357985 TRPM2O94759 1503 aa20.51■□□□□ 0.87
FAM3B-201ENST00000357985 CHGAP10645 457 aaKnown RBP20.5■□□□□ 0.87
FAM3B-201ENST00000357985 NUP155O75694 1391 aa20.48■□□□□ 0.87
FAM3B-201ENST00000357985 RBM33Q96EV2 1170 aaKnown RBP20.48■□□□□ 0.87
FAM3B-201ENST00000357985 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
FAM3B-201ENST00000357985 ADAMTS13Q76LX8 1427 aa20.47■□□□□ 0.87
FAM3B-201ENST00000357985 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
FAM3B-201ENST00000357985 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
FAM3B-201ENST00000357985 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
FAM3B-201ENST00000357985 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
FAM3B-201ENST00000357985 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
FAM3B-201ENST00000357985 ITGAEP38570 1179 aa20.44■□□□□ 0.86
FAM3B-201ENST00000357985 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
FAM3B-201ENST00000357985 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
FAM3B-201ENST00000357985 KIF1BO60333 1816 aa20.43■□□□□ 0.86
FAM3B-201ENST00000357985 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
FAM3B-201ENST00000357985 AHDC1Q5TGY3 1603 aaPredicted RBP20.41■□□□□ 0.86
FAM3B-201ENST00000357985 SHPRHQ149N8 1683 aa20.4■□□□□ 0.86
FAM3B-201ENST00000357985 NUTM2DQ5VT03 806 aaPredicted RBP20.4■□□□□ 0.86
FAM3B-201ENST00000357985 SLAIN2Q9P270 581 aa20.4■□□□□ 0.86
FAM3B-201ENST00000357985 JCADQ9P266 1359 aa20.39■□□□□ 0.85
FAM3B-201ENST00000357985 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
FAM3B-201ENST00000357985 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
FAM3B-201ENST00000357985 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
FAM3B-201ENST00000357985 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
FAM3B-201ENST00000357985 DCCP43146 1447 aa20.36■□□□□ 0.85
FAM3B-201ENST00000357985 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
FAM3B-201ENST00000357985 PTPRUQ92729 1446 aa20.35■□□□□ 0.85
FAM3B-201ENST00000357985 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
FAM3B-201ENST00000357985 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
FAM3B-201ENST00000357985 NHSL1Q5SYE7 1610 aa20.32■□□□□ 0.84
FAM3B-201ENST00000357985 ATF3P18847 181 aa20.32■□□□□ 0.84
FAM3B-201ENST00000357985 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
FAM3B-201ENST00000357985 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
FAM3B-201ENST00000357985 AMOTL2Q9Y2J4 779 aa20.31■□□□□ 0.84
FAM3B-201ENST00000357985 NAIPQ13075 1403 aa20.3■□□□□ 0.84
FAM3B-201ENST00000357985 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
FAM3B-201ENST00000357985 ASXL1Q8IXJ9 1541 aa20.29■□□□□ 0.84
FAM3B-201ENST00000357985 LRP6O75581 1613 aa20.29■□□□□ 0.84
FAM3B-201ENST00000357985 SPATA31A6Q5VVP1 1343 aa20.28■□□□□ 0.84
FAM3B-201ENST00000357985 POTEAQ6S8J7 498 aa20.28■□□□□ 0.84
FAM3B-201ENST00000357985 ADGRL3Q9HAR2 1447 aa20.26■□□□□ 0.83
FAM3B-201ENST00000357985 PPLO60437 1756 aa20.26■□□□□ 0.83
FAM3B-201ENST00000357985 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
FAM3B-201ENST00000357985 MST1RQ04912 1400 aa20.25■□□□□ 0.83
FAM3B-201ENST00000357985 METP08581 1390 aa20.23■□□□□ 0.83
FAM3B-201ENST00000357985 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
FAM3B-201ENST00000357985 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
FAM3B-201ENST00000357985 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
FAM3B-201ENST00000357985 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
FAM3B-201ENST00000357985 LAMC1P11047 1609 aa20.18■□□□□ 0.82
FAM3B-201ENST00000357985 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
FAM3B-201ENST00000357985 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
FAM3B-201ENST00000357985 TRIM52Q96A61 297 aa20.16■□□□□ 0.82
FAM3B-201ENST00000357985 IFT172Q9UG01 1749 aa20.16■□□□□ 0.82
FAM3B-201ENST00000357985 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
FAM3B-201ENST00000357985 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
FAM3B-201ENST00000357985 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
FAM3B-201ENST00000357985 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
FAM3B-201ENST00000357985 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
FAM3B-201ENST00000357985 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
FAM3B-201ENST00000357985 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
FAM3B-201ENST00000357985 NUTM2BA6NNL0 878 aaPredicted RBP20.09■□□□□ 0.81
FAM3B-201ENST00000357985 NUTM2EB1AL46 878 aaPredicted RBP20.09■□□□□ 0.81
FAM3B-201ENST00000357985 NUTM2AQ8IVF1 878 aaPredicted RBP20.09■□□□□ 0.81
FAM3B-201ENST00000357985 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
FAM3B-201ENST00000357985 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
FAM3B-201ENST00000357985 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
FAM3B-201ENST00000357985 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.8
FAM3B-201ENST00000357985 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
FAM3B-201ENST00000357985 AFF2P51816 1311 aa20.04■□□□□ 0.8
FAM3B-201ENST00000357985 RXRBP28702 533 aa20.03■□□□□ 0.8
FAM3B-201ENST00000357985 MARF1Q9Y4F3 1742 aaKnown RBP20.02■□□□□ 0.8
FAM3B-201ENST00000357985 DDX17Q92841 729 aaKnown RBP20.02■□□□□ 0.8
FAM3B-201ENST00000357985 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
FAM3B-201ENST00000357985 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
FAM3B-201ENST00000357985 ANKRD30BQ9BXX2 1392 aa19.99■□□□□ 0.79
FAM3B-201ENST00000357985 C8orf37Q96NL8 207 aa19.99■□□□□ 0.79
FAM3B-201ENST00000357985 TECPR2O15040 1411 aa19.99■□□□□ 0.79
FAM3B-201ENST00000357985 KIF1AQ12756 1690 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms