RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
SNCG-201ENST00000348795 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
SNCG-201ENST00000348795 NLRP1Q9C000 1473 aa25.85■■□□□ 1.73
SNCG-201ENST00000348795 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
SNCG-201ENST00000348795 C3P01024 1663 aa25.82■■□□□ 1.72
SNCG-201ENST00000348795 USP47Q96K76 1375 aa25.82■■□□□ 1.72
SNCG-201ENST00000348795 DIEXFQ68CQ4 756 aaKnown RBP25.81■■□□□ 1.72
SNCG-201ENST00000348795 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
SNCG-201ENST00000348795 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
SNCG-201ENST00000348795 SLC24A1O60721 1099 aa25.8■■□□□ 1.72
SNCG-201ENST00000348795 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
SNCG-201ENST00000348795 A2ML1A8K2U0 1454 aa25.77■■□□□ 1.72
SNCG-201ENST00000348795 PIK3C2GO75747 1445 aa25.76■■□□□ 1.71
SNCG-201ENST00000348795 SETBP1Q9Y6X0 1596 aa25.76■■□□□ 1.71
SNCG-201ENST00000348795 EIF3AQ14152 1382 aaKnown RBP25.74■■□□□ 1.71
SNCG-201ENST00000348795 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
SNCG-201ENST00000348795 C14orf93Q9H972 538 aaKnown RBP25.73■■□□□ 1.71
SNCG-201ENST00000348795 MYO5BQ9ULV0 1848 aa25.72■■□□□ 1.71
SNCG-201ENST00000348795 RIMS1Q86UR5 1692 aaKnown RBP25.71■■□□□ 1.71
SNCG-201ENST00000348795 SCAF11Q99590 1463 aaKnown RBP25.71■■□□□ 1.71
SNCG-201ENST00000348795 NBPF1Q3BBV0 1214 aa25.7■■□□□ 1.7
SNCG-201ENST00000348795 POLR1AO95602 1720 aaPredicted RBP25.69■■□□□ 1.7
SNCG-201ENST00000348795 RIMS2Q9UQ26 1411 aa25.69■■□□□ 1.7
SNCG-201ENST00000348795 UBR1Q8IWV7 1749 aa25.68■■□□□ 1.7
SNCG-201ENST00000348795 CEBPAP49715 358 aaPredicted RBP25.66■■□□□ 1.7
SNCG-201ENST00000348795 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
SNCG-201ENST00000348795 IQGAP1P46940 1657 aa25.66■■□□□ 1.7
SNCG-201ENST00000348795 CFAP70Q5T0N1 1121 aa25.65■■□□□ 1.7
SNCG-201ENST00000348795 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
SNCG-201ENST00000348795 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
SNCG-201ENST00000348795 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
SNCG-201ENST00000348795 ST20-MTHFSA0A0A6YYL1 179 aa25.63■■□□□ 1.69
SNCG-201ENST00000348795 EID1Q9Y6B2 187 aa25.61■■□□□ 1.69
SNCG-201ENST00000348795 MYO3AQ8NEV4 1616 aa25.61■■□□□ 1.69
SNCG-201ENST00000348795 CCDC7Q96M83 1385 aa25.6■■□□□ 1.69
SNCG-201ENST00000348795 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
SNCG-201ENST00000348795 SLIT1O75093 1534 aa25.58■■□□□ 1.69
SNCG-201ENST00000348795 TMF1P82094 1093 aa25.57■■□□□ 1.68
SNCG-201ENST00000348795 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
SNCG-201ENST00000348795 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
SNCG-201ENST00000348795 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
SNCG-201ENST00000348795 CEP170BQ9Y4F5 1589 aaPredicted RBP25.55■■□□□ 1.68
SNCG-201ENST00000348795 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
SNCG-201ENST00000348795 ZNF142P52746 1687 aaPredicted RBP25.55■■□□□ 1.68
SNCG-201ENST00000348795 PTPRMP28827 1452 aa25.54■■□□□ 1.68
SNCG-201ENST00000348795 DDX10Q13206 875 aaKnown RBP25.54■■□□□ 1.68
SNCG-201ENST00000348795 ALKQ9UM73 1620 aa25.53■■□□□ 1.68
SNCG-201ENST00000348795 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
SNCG-201ENST00000348795 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
SNCG-201ENST00000348795 PLEKHG1Q9ULL1 1385 aa25.52■■□□□ 1.68
SNCG-201ENST00000348795 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
SNCG-201ENST00000348795 TESK2Q96S53 571 aa25.5■■□□□ 1.67
SNCG-201ENST00000348795 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
SNCG-201ENST00000348795 TXNDC2Q86VQ3 553 aa25.49■■□□□ 1.67
SNCG-201ENST00000348795 CENPJQ9HC77 1338 aaPredicted RBP25.48■■□□□ 1.67
SNCG-201ENST00000348795 C11orf95C9JLR9 678 aaPredicted RBP25.45■■□□□ 1.66
SNCG-201ENST00000348795 YTHDC2Q9H6S0 1430 aaKnown RBP25.45■■□□□ 1.66
SNCG-201ENST00000348795 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
SNCG-201ENST00000348795 DLC1Q96QB1 1528 aa25.43■■□□□ 1.66
SNCG-201ENST00000348795 TMEM132EQ6IEE7 984 aa25.43■■□□□ 1.66
SNCG-201ENST00000348795 SIRT1Q96EB6 747 aa25.43■■□□□ 1.66
SNCG-201ENST00000348795 BCANQ96GW7 911 aa25.43■■□□□ 1.66
SNCG-201ENST00000348795 PUS7Q96PZ0 661 aaKnown RBP25.43■■□□□ 1.66
SNCG-201ENST00000348795 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
SNCG-201ENST00000348795 LRPPRCP42704 1394 aaKnown RBP25.43■■□□□ 1.66
SNCG-201ENST00000348795 ANKLE2Q86XL3 938 aa25.41■■□□□ 1.66
SNCG-201ENST00000348795 ABCC11Q96J66 1382 aa25.41■■□□□ 1.66
SNCG-201ENST00000348795 NRXN3Q9Y4C0 1643 aa25.41■■□□□ 1.66
SNCG-201ENST00000348795 SETD1AO15047 1707 aaKnown RBP25.4■■□□□ 1.66
SNCG-201ENST00000348795 ASXL1Q8IXJ9 1541 aa25.39■■□□□ 1.66
SNCG-201ENST00000348795 ANP32CO43423 234 aa25.39■■□□□ 1.66
SNCG-201ENST00000348795 LTKP29376 864 aa25.39■■□□□ 1.66
SNCG-201ENST00000348795 TBX22Q9Y458 520 aa25.39■■□□□ 1.66
SNCG-201ENST00000348795 ARHGEF28Q8N1W1 1705 aaKnown RBP25.39■■□□□ 1.65
SNCG-201ENST00000348795 QRICH2Q9H0J4 1663 aa25.36■■□□□ 1.65
SNCG-201ENST00000348795 MED14O60244 1454 aa25.35■■□□□ 1.65
SNCG-201ENST00000348795 KNDC1Q76NI1 1749 aa25.35■■□□□ 1.65
SNCG-201ENST00000348795 PIK3R4Q99570 1358 aa25.35■■□□□ 1.65
SNCG-201ENST00000348795 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
SNCG-201ENST00000348795 DISP3Q9P2K9 1392 aa25.34■■□□□ 1.65
SNCG-201ENST00000348795 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
SNCG-201ENST00000348795 POGKQ9P215 609 aa25.34■■□□□ 1.65
SNCG-201ENST00000348795 TECPR2O15040 1411 aa25.34■■□□□ 1.65
SNCG-201ENST00000348795 EVC2Q86UK5 1308 aa25.34■■□□□ 1.65
SNCG-201ENST00000348795 FAM135BQ49AJ0 1406 aa25.33■■□□□ 1.65
SNCG-201ENST00000348795 MIER1Q8N108 512 aa25.32■■□□□ 1.64
SNCG-201ENST00000348795 STK26Q9P289 416 aa25.32■■□□□ 1.64
SNCG-201ENST00000348795 METP08581 1390 aa25.29■■□□□ 1.64
SNCG-201ENST00000348795 CPS1P31327 1500 aa25.27■■□□□ 1.64
SNCG-201ENST00000348795 PRAM1Q96QH2 718 aa25.27■■□□□ 1.64
SNCG-201ENST00000348795 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
SNCG-201ENST00000348795 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
SNCG-201ENST00000348795 CCER2I3L3R5 266 aa25.24■■□□□ 1.63
SNCG-201ENST00000348795 KDM4FA0A1W2PPD8 638 aa25.23■■□□□ 1.63
SNCG-201ENST00000348795 NPHP4O75161 1426 aaPredicted RBP25.2■■□□□ 1.63
SNCG-201ENST00000348795 ATAD2Q6PL18 1390 aa25.2■■□□□ 1.63
SNCG-201ENST00000348795 SLC26A8Q96RN1 970 aa25.2■■□□□ 1.62
SNCG-201ENST00000348795 PTCH1Q13635 1447 aa25.2■■□□□ 1.62
SNCG-201ENST00000348795 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
SNCG-201ENST00000348795 PANK3Q9H999 370 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms