RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
CASC4-202ENST00000345795 PANK1Q8TE04 598 aa17.29■□□□□ 0.36
CASC4-202ENST00000345795 TESK2Q96S53 571 aa17.29■□□□□ 0.36
CASC4-202ENST00000345795 FANCAO15360 1455 aa17.28■□□□□ 0.36
CASC4-202ENST00000345795 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
CASC4-202ENST00000345795 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
CASC4-202ENST00000345795 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
CASC4-202ENST00000345795 CD109Q6YHK3 1445 aa17.27■□□□□ 0.35
CASC4-202ENST00000345795 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
CASC4-202ENST00000345795 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
CASC4-202ENST00000345795 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
CASC4-202ENST00000345795 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
CASC4-202ENST00000345795 ASXL2Q76L83 1435 aa17.23■□□□□ 0.35
CASC4-202ENST00000345795 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
CASC4-202ENST00000345795 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
CASC4-202ENST00000345795 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
CASC4-202ENST00000345795 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
CASC4-202ENST00000345795 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
CASC4-202ENST00000345795 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
CASC4-202ENST00000345795 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
CASC4-202ENST00000345795 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
CASC4-202ENST00000345795 PLCH2O75038 1416 aa17.21■□□□□ 0.35
CASC4-202ENST00000345795 A0A0G2JS52 829 aa17.21■□□□□ 0.35
CASC4-202ENST00000345795 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
CASC4-202ENST00000345795 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
CASC4-202ENST00000345795 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
CASC4-202ENST00000345795 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
CASC4-202ENST00000345795 NOS1P29475 1434 aa17.19■□□□□ 0.34
CASC4-202ENST00000345795 MSH5O43196 834 aa17.19■□□□□ 0.34
CASC4-202ENST00000345795 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
CASC4-202ENST00000345795 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
CASC4-202ENST00000345795 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
CASC4-202ENST00000345795 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
CASC4-202ENST00000345795 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
CASC4-202ENST00000345795 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
CASC4-202ENST00000345795 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
CASC4-202ENST00000345795 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
CASC4-202ENST00000345795 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CASC4-202ENST00000345795 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
CASC4-202ENST00000345795 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
CASC4-202ENST00000345795 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
CASC4-202ENST00000345795 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
CASC4-202ENST00000345795 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
CASC4-202ENST00000345795 PDE4AP27815 886 aa17.15■□□□□ 0.34
CASC4-202ENST00000345795 A2MP01023 1474 aa17.14■□□□□ 0.33
CASC4-202ENST00000345795 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
CASC4-202ENST00000345795 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
CASC4-202ENST00000345795 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
CASC4-202ENST00000345795 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
CASC4-202ENST00000345795 RIPK4P57078 832 aa17.13■□□□□ 0.33
CASC4-202ENST00000345795 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
CASC4-202ENST00000345795 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
CASC4-202ENST00000345795 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
CASC4-202ENST00000345795 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CASC4-202ENST00000345795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■□□□ 12.8
CASC4-202ENST00000345795 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
CASC4-202ENST00000345795 NSD3Q9BZ95 1437 aa17.12■□□□□ 0.33
CASC4-202ENST00000345795 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
CASC4-202ENST00000345795 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
CASC4-202ENST00000345795 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
CASC4-202ENST00000345795 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
CASC4-202ENST00000345795 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.33
CASC4-202ENST00000345795 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
CASC4-202ENST00000345795 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.32
CASC4-202ENST00000345795 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
CASC4-202ENST00000345795 ABCA8O94911 1581 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 ABCC2Q92887 1545 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
CASC4-202ENST00000345795 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
CASC4-202ENST00000345795 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
CASC4-202ENST00000345795 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
CASC4-202ENST00000345795 NME9Q86XW9 330 aa17.06■□□□□ 0.32
CASC4-202ENST00000345795 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
CASC4-202ENST00000345795 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
CASC4-202ENST00000345795 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
CASC4-202ENST00000345795 CHD1O14646 1710 aa17.05■□□□□ 0.32
CASC4-202ENST00000345795 E9PSI1 815 aa17.05■□□□□ 0.32
CASC4-202ENST00000345795 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
CASC4-202ENST00000345795 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
CASC4-202ENST00000345795 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
CASC4-202ENST00000345795 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
CASC4-202ENST00000345795 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
CASC4-202ENST00000345795 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
CASC4-202ENST00000345795 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
CASC4-202ENST00000345795 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
CASC4-202ENST00000345795 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
CASC4-202ENST00000345795 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
CASC4-202ENST00000345795 COG3Q96JB2 828 aa17.02■□□□□ 0.32
CASC4-202ENST00000345795 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.31
CASC4-202ENST00000345795 AMPHP49418 695 aa17.01■□□□□ 0.31
CASC4-202ENST00000345795 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
CASC4-202ENST00000345795 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
CASC4-202ENST00000345795 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
CASC4-202ENST00000345795 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
CASC4-202ENST00000345795 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CASC4-202ENST00000345795 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
CASC4-202ENST00000345795 SLFN5Q08AF3 891 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms