RNA–Protein interactions for RNA: ENST00000345008.6

LYPD1-201, Transcript of LY6/PLAUR domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LYPD1, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-201ENST00000345008 HSPA1LP34931 641 aa29.79■■■□□ 2.36
LYPD1-201ENST00000345008 ZFYVE9O95405 1425 aa29.79■■■□□ 2.36
LYPD1-201ENST00000345008 RIMS2Q9UQ26 1411 aa29.79■■■□□ 2.36
LYPD1-201ENST00000345008 XIRP1Q702N8 1843 aaKnown RBP29.78■■■□□ 2.36
LYPD1-201ENST00000345008 PPP1R15AO75807 674 aaPredicted RBP29.78■■■□□ 2.36
LYPD1-201ENST00000345008 HDGFP51858 240 aaKnown RBP29.78■■■□□ 2.36
LYPD1-201ENST00000345008 KCNA6P17658 529 aa29.75■■■□□ 2.35
LYPD1-201ENST00000345008 PLEKHG1Q9ULL1 1385 aa29.74■■■□□ 2.35
LYPD1-201ENST00000345008 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
LYPD1-201ENST00000345008 SENP3Q9H4L4 574 aaPredicted RBP29.72■■■□□ 2.35
LYPD1-201ENST00000345008 SPHKAPQ2M3C7 1700 aa29.71■■■□□ 2.35
LYPD1-201ENST00000345008 NAIPQ13075 1403 aa29.7■■■□□ 2.34
LYPD1-201ENST00000345008 NWD1Q149M9 1564 aa29.69■■■□□ 2.34
LYPD1-201ENST00000345008 TMEM94Q12767 1356 aa29.69■■■□□ 2.34
LYPD1-201ENST00000345008 NKTRP30414 1462 aaKnown RBP29.68■■■□□ 2.34
LYPD1-201ENST00000345008 PROSER2Q86WR7 435 aaPredicted RBP29.67■■■□□ 2.34
LYPD1-201ENST00000345008 CHD2O14647 1828 aaKnown RBP29.64■■■□□ 2.34
LYPD1-201ENST00000345008 ILDR2Q71H61 639 aa29.64■■■□□ 2.34
LYPD1-201ENST00000345008 NUTM2DQ5VT03 806 aaPredicted RBP29.63■■■□□ 2.33
LYPD1-201ENST00000345008 HFM1A2PYH4 1435 aa29.62■■■□□ 2.33
LYPD1-201ENST00000345008 TBX22Q9Y458 520 aa29.61■■■□□ 2.33
LYPD1-201ENST00000345008 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
LYPD1-201ENST00000345008 RBM33Q96EV2 1170 aaKnown RBP29.59■■■□□ 2.33
LYPD1-201ENST00000345008 MED1Q15648 1581 aaPredicted RBP29.57■■■□□ 2.32
LYPD1-201ENST00000345008 ADAMTS13Q76LX8 1427 aa29.56■■■□□ 2.32
LYPD1-201ENST00000345008 TRIM52Q96A61 297 aa29.56■■■□□ 2.32
LYPD1-201ENST00000345008 TRPM2O94759 1503 aa29.55■■■□□ 2.32
LYPD1-201ENST00000345008 MSH6P52701 1360 aa29.54■■■□□ 2.32
LYPD1-201ENST00000345008 CLTCL1P53675 1640 aa29.54■■■□□ 2.32
LYPD1-201ENST00000345008 ZNF326Q5BKZ1 582 aaKnown RBP29.54■■■□□ 2.32
LYPD1-201ENST00000345008 FAM135BQ49AJ0 1406 aa29.53■■■□□ 2.32
LYPD1-201ENST00000345008 PIK3R4Q99570 1358 aa29.52■■■□□ 2.32
LYPD1-201ENST00000345008 KIF1BO60333 1816 aa29.51■■■□□ 2.31
LYPD1-201ENST00000345008 ROBO1Q9Y6N7 1651 aa29.47■■■□□ 2.31
LYPD1-201ENST00000345008 SLC4A1APQ9BWU0 796 aaKnown RBP29.46■■■□□ 2.31
LYPD1-201ENST00000345008 SETBP1Q9Y6X0 1596 aa29.45■■■□□ 2.31
LYPD1-201ENST00000345008 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
LYPD1-201ENST00000345008 NCOA3Q9Y6Q9 1424 aa29.45■■■□□ 2.3
LYPD1-201ENST00000345008 SOCS7O14512 581 aa29.44■■■□□ 2.3
LYPD1-201ENST00000345008 C14orf37Q86TY3 774 aa29.44■■■□□ 2.3
LYPD1-201ENST00000345008 NEXMIFQ5QGS0 1516 aa29.42■■■□□ 2.3
LYPD1-201ENST00000345008 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
LYPD1-201ENST00000345008 SLAIN2Q9P270 581 aa29.41■■■□□ 2.3
LYPD1-201ENST00000345008 AMOTL2Q9Y2J4 779 aa29.41■■■□□ 2.3
LYPD1-201ENST00000345008 PTPRUQ92729 1446 aa29.39■■■□□ 2.3
LYPD1-201ENST00000345008 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.37■■■□□ 2.29
LYPD1-201ENST00000345008 XRN1Q8IZH2 1706 aaKnown RBP29.36■■■□□ 2.29
LYPD1-201ENST00000345008 C19orf44Q9H6X5 657 aa29.34■■■□□ 2.29
LYPD1-201ENST00000345008 CADPS2Q86UW7 1296 aa29.33■■■□□ 2.29
LYPD1-201ENST00000345008 PHLPP1O60346 1717 aa29.32■■■□□ 2.28
LYPD1-201ENST00000345008 METP08581 1390 aa29.32■■■□□ 2.28
LYPD1-201ENST00000345008 ATF3P18847 181 aa29.32■■■□□ 2.28
LYPD1-201ENST00000345008 VGFO15240 615 aaPredicted RBP29.3■■■□□ 2.28
LYPD1-201ENST00000345008 FOXD1Q16676 465 aa29.29■■■□□ 2.28
LYPD1-201ENST00000345008 RPGRIP1LQ68CZ1 1315 aa29.28■■■□□ 2.28
LYPD1-201ENST00000345008 PPLO60437 1756 aa29.26■■■□□ 2.28
LYPD1-201ENST00000345008 DCCP43146 1447 aa29.25■■■□□ 2.27
LYPD1-201ENST00000345008 CCDC144AA2RUR9 1427 aa29.24■■■□□ 2.27
LYPD1-201ENST00000345008 MPHOSPH9Q99550 1183 aa29.24■■■□□ 2.27
LYPD1-201ENST00000345008 SETD1AO15047 1707 aaKnown RBP29.22■■■□□ 2.27
LYPD1-201ENST00000345008 ACIN1Q9UKV3 1341 aaKnown RBP29.21■■■□□ 2.27
LYPD1-201ENST00000345008 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.26
LYPD1-201ENST00000345008 SETD5Q9C0A6 1442 aa29.2■■■□□ 2.26
LYPD1-201ENST00000345008 JCADQ9P266 1359 aa29.19■■■□□ 2.26
LYPD1-201ENST00000345008 AHDC1Q5TGY3 1603 aaPredicted RBP29.17■■■□□ 2.26
LYPD1-201ENST00000345008 ADGRL3Q9HAR2 1447 aa29.17■■■□□ 2.26
LYPD1-201ENST00000345008 NALCNQ8IZF0 1738 aa29.16■■■□□ 2.26
LYPD1-201ENST00000345008 PTCH1Q13635 1447 aa29.14■■■□□ 2.26
LYPD1-201ENST00000345008 BRINP3Q76B58 766 aa29.14■■■□□ 2.26
LYPD1-201ENST00000345008 RGL3Q3MIN7 710 aa29.13■■■□□ 2.25
LYPD1-201ENST00000345008 MST1RQ04912 1400 aa29.12■■■□□ 2.25
LYPD1-201ENST00000345008 SPATA31E1Q6ZUB1 1445 aa29.12■■■□□ 2.25
LYPD1-201ENST00000345008 RGS17Q9UGC6 210 aaPredicted RBP29.11■■■□□ 2.25
LYPD1-201ENST00000345008 IFT172Q9UG01 1749 aa29.1■■■□□ 2.25
LYPD1-201ENST00000345008 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
LYPD1-201ENST00000345008 ANKRD30BQ9BXX2 1392 aa29.09■■■□□ 2.25
LYPD1-201ENST00000345008 ROBO2Q9HCK4 1378 aa29.09■■■□□ 2.25
LYPD1-201ENST00000345008 RAB3GAP2Q9H2M9 1393 aa29.08■■■□□ 2.25
LYPD1-201ENST00000345008 PRAG1Q86YV5 1406 aa29.08■■■□□ 2.25
LYPD1-201ENST00000345008 ADGRF5Q8IZF2 1346 aa29.07■■■□□ 2.24
LYPD1-201ENST00000345008 SHPRHQ149N8 1683 aa29.06■■■□□ 2.24
LYPD1-201ENST00000345008 SPATA31A6Q5VVP1 1343 aa29.04■■■□□ 2.24
LYPD1-201ENST00000345008 NHSL1Q5SYE7 1610 aa29.04■■■□□ 2.24
LYPD1-201ENST00000345008 C1orf167Q5SNV9 1468 aa28.99■■■□□ 2.23
LYPD1-201ENST00000345008 MEX3CQ5U5Q3 659 aaKnown RBP28.98■■■□□ 2.23
LYPD1-201ENST00000345008 POTEAQ6S8J7 498 aa28.98■■■□□ 2.23
LYPD1-201ENST00000345008 LRP6O75581 1613 aa28.98■■■□□ 2.23
LYPD1-201ENST00000345008 PIK3C2GO75747 1445 aa28.97■■■□□ 2.23
LYPD1-201ENST00000345008 STK26Q9P289 416 aa28.95■■■□□ 2.22
LYPD1-201ENST00000345008 LRRC59Q96AG4 307 aaKnown RBP28.94■■■□□ 2.22
LYPD1-201ENST00000345008 LRPPRCP42704 1394 aaKnown RBP28.93■■■□□ 2.22
LYPD1-201ENST00000345008 DDX17Q92841 729 aaKnown RBP28.93■■■□□ 2.22
LYPD1-201ENST00000345008 TECPR2O15040 1411 aa28.93■■■□□ 2.22
LYPD1-201ENST00000345008 KNDC1Q76NI1 1749 aa28.92■■■□□ 2.22
LYPD1-201ENST00000345008 TMEM132EQ6IEE7 984 aa28.91■■■□□ 2.22
LYPD1-201ENST00000345008 CDC42BPGQ6DT37 1551 aa28.91■■■□□ 2.22
LYPD1-201ENST00000345008 NUTM2BA6NNL0 878 aaPredicted RBP28.9■■■□□ 2.22
LYPD1-201ENST00000345008 NUTM2EB1AL46 878 aaPredicted RBP28.9■■■□□ 2.22
LYPD1-201ENST00000345008 NUTM2AQ8IVF1 878 aaPredicted RBP28.9■■■□□ 2.22
LYPD1-201ENST00000345008 MYOM2P54296 1465 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms