RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 GCC2Q8IWJ2 1684 aa27.16■■□□□ 1.94
USF2-202ENST00000343550 ZFYVE9O95405 1425 aa27.15■■□□□ 1.94
USF2-202ENST00000343550 MED1Q15648 1581 aaPredicted RBP27.15■■□□□ 1.94
USF2-202ENST00000343550 PROSER2Q86WR7 435 aaPredicted RBP27.15■■□□□ 1.94
USF2-202ENST00000343550 XIRP1Q702N8 1843 aaKnown RBP27.14■■□□□ 1.94
USF2-202ENST00000343550 NUP155O75694 1391 aa27.14■■□□□ 1.94
USF2-202ENST00000343550 NAIPQ13075 1403 aa27.14■■□□□ 1.94
USF2-202ENST00000343550 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
USF2-202ENST00000343550 RIMS2Q9UQ26 1411 aa27.12■■□□□ 1.93
USF2-202ENST00000343550 CHGAP10645 457 aaKnown RBP27.12■■□□□ 1.93
USF2-202ENST00000343550 PLEKHG1Q9ULL1 1385 aa27.12■■□□□ 1.93
USF2-202ENST00000343550 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
USF2-202ENST00000343550 TMEM131LA2VDJ0 1609 aa27.11■■□□□ 1.93
USF2-202ENST00000343550 E9PCH4 1651 aa27.1■■□□□ 1.93
USF2-202ENST00000343550 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
USF2-202ENST00000343550 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.09■■□□□ 1.93
USF2-202ENST00000343550 HFM1A2PYH4 1435 aa27.09■■□□□ 1.93
USF2-202ENST00000343550 MYO5BQ9ULV0 1848 aa27.08■■□□□ 1.93
USF2-202ENST00000343550 NKTRP30414 1462 aaKnown RBP27.07■■□□□ 1.92
USF2-202ENST00000343550 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
USF2-202ENST00000343550 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
USF2-202ENST00000343550 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
USF2-202ENST00000343550 NUTM2DQ5VT03 806 aaPredicted RBP27.04■■□□□ 1.92
USF2-202ENST00000343550 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
USF2-202ENST00000343550 MSH6P52701 1360 aa26.99■■□□□ 1.91
USF2-202ENST00000343550 ADAMTS13Q76LX8 1427 aa26.97■■□□□ 1.91
USF2-202ENST00000343550 CHD2O14647 1828 aaKnown RBP26.96■■□□□ 1.91
USF2-202ENST00000343550 SLAIN2Q9P270 581 aa26.95■■□□□ 1.91
USF2-202ENST00000343550 TRIM52Q96A61 297 aa26.95■■□□□ 1.9
USF2-202ENST00000343550 PIK3R4Q99570 1358 aa26.92■■□□□ 1.9
USF2-202ENST00000343550 ROBO1Q9Y6N7 1651 aa26.91■■□□□ 1.9
USF2-202ENST00000343550 NCOA3Q9Y6Q9 1424 aa26.91■■□□□ 1.9
USF2-202ENST00000343550 DIP2AQ14689 1571 aa26.9■■□□□ 1.9
USF2-202ENST00000343550 C14orf37Q86TY3 774 aa26.89■■□□□ 1.89
USF2-202ENST00000343550 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
USF2-202ENST00000343550 ZNF326Q5BKZ1 582 aaKnown RBP26.87■■□□□ 1.89
USF2-202ENST00000343550 SPHKAPQ2M3C7 1700 aa26.86■■□□□ 1.89
USF2-202ENST00000343550 AMOTL2Q9Y2J4 779 aa26.86■■□□□ 1.89
USF2-202ENST00000343550 C19orf44Q9H6X5 657 aa26.85■■□□□ 1.89
USF2-202ENST00000343550 RGS17Q9UGC6 210 aaPredicted RBP26.85■■□□□ 1.89
USF2-202ENST00000343550 TRPM2O94759 1503 aa26.83■■□□□ 1.89
USF2-202ENST00000343550 SLC4A1APQ9BWU0 796 aaKnown RBP26.83■■□□□ 1.89
USF2-202ENST00000343550 PTPRUQ92729 1446 aa26.83■■□□□ 1.88
USF2-202ENST00000343550 CADPS2Q86UW7 1296 aa26.82■■□□□ 1.88
USF2-202ENST00000343550 ACIN1Q9UKV3 1341 aaKnown RBP26.81■■□□□ 1.88
USF2-202ENST00000343550 ATF3P18847 181 aa26.8■■□□□ 1.88
USF2-202ENST00000343550 SETBP1Q9Y6X0 1596 aa26.78■■□□□ 1.88
USF2-202ENST00000343550 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
USF2-202ENST00000343550 CLTCL1P53675 1640 aa26.76■■□□□ 1.88
USF2-202ENST00000343550 NRXN3Q9Y4C0 1643 aa26.76■■□□□ 1.88
USF2-202ENST00000343550 MPHOSPH9Q99550 1183 aa26.76■■□□□ 1.87
USF2-202ENST00000343550 PHLPP1O60346 1717 aa26.75■■□□□ 1.87
USF2-202ENST00000343550 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.75■■□□□ 1.87
USF2-202ENST00000343550 METP08581 1390 aa26.75■■□□□ 1.87
USF2-202ENST00000343550 JCADQ9P266 1359 aa26.75■■□□□ 1.87
USF2-202ENST00000343550 HRCP23327 699 aa26.72■■□□□ 1.87
USF2-202ENST00000343550 NEXMIFQ5QGS0 1516 aa26.72■■□□□ 1.87
USF2-202ENST00000343550 FOXD1Q16676 465 aa26.7■■□□□ 1.87
USF2-202ENST00000343550 XRN1Q8IZH2 1706 aaKnown RBP26.69■■□□□ 1.86
USF2-202ENST00000343550 POTEAQ6S8J7 498 aa26.69■■□□□ 1.86
USF2-202ENST00000343550 COL16A1Q07092 1604 aaPredicted RBP26.68■■□□□ 1.86
USF2-202ENST00000343550 DCCP43146 1447 aa26.68■■□□□ 1.86
USF2-202ENST00000343550 VGFO15240 615 aaPredicted RBP26.67■■□□□ 1.86
USF2-202ENST00000343550 BRINP3Q76B58 766 aa26.67■■□□□ 1.86
USF2-202ENST00000343550 KIF1BO60333 1816 aa26.67■■□□□ 1.86
USF2-202ENST00000343550 AHDC1Q5TGY3 1603 aaPredicted RBP26.63■■□□□ 1.85
USF2-202ENST00000343550 RPGRIP1LQ68CZ1 1315 aa26.63■■□□□ 1.85
USF2-202ENST00000343550 SPATA31A6Q5VVP1 1343 aa26.62■■□□□ 1.85
USF2-202ENST00000343550 MST1RQ04912 1400 aa26.59■■□□□ 1.85
USF2-202ENST00000343550 ADGRL3Q9HAR2 1447 aa26.59■■□□□ 1.85
USF2-202ENST00000343550 ASXL1Q8IXJ9 1541 aa26.56■■□□□ 1.84
USF2-202ENST00000343550 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
USF2-202ENST00000343550 MEX3CQ5U5Q3 659 aaKnown RBP26.55■■□□□ 1.84
USF2-202ENST00000343550 LRP6O75581 1613 aa26.55■■□□□ 1.84
USF2-202ENST00000343550 ROBO2Q9HCK4 1378 aa26.52■■□□□ 1.84
USF2-202ENST00000343550 PTCH1Q13635 1447 aa26.52■■□□□ 1.84
USF2-202ENST00000343550 SHPRHQ149N8 1683 aa26.51■■□□□ 1.83
USF2-202ENST00000343550 CCDC144AA2RUR9 1427 aa26.5■■□□□ 1.83
USF2-202ENST00000343550 SETD1AO15047 1707 aaKnown RBP26.5■■□□□ 1.83
USF2-202ENST00000343550 LRRC59Q96AG4 307 aaKnown RBP26.49■■□□□ 1.83
USF2-202ENST00000343550 NALCNQ8IZF0 1738 aa26.49■■□□□ 1.83
USF2-202ENST00000343550 NUTM2BA6NNL0 878 aaPredicted RBP26.49■■□□□ 1.83
USF2-202ENST00000343550 NUTM2EB1AL46 878 aaPredicted RBP26.49■■□□□ 1.83
USF2-202ENST00000343550 NUTM2AQ8IVF1 878 aaPredicted RBP26.49■■□□□ 1.83
USF2-202ENST00000343550 DDX17Q92841 729 aaKnown RBP26.49■■□□□ 1.83
USF2-202ENST00000343550 PPLO60437 1756 aa26.48■■□□□ 1.83
USF2-202ENST00000343550 RGL3Q3MIN7 710 aa26.48■■□□□ 1.83
USF2-202ENST00000343550 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
USF2-202ENST00000343550 PRAG1Q86YV5 1406 aa26.47■■□□□ 1.83
USF2-202ENST00000343550 C1orf167Q5SNV9 1468 aa26.46■■□□□ 1.83
USF2-202ENST00000343550 ADGRF5Q8IZF2 1346 aa26.45■■□□□ 1.83
USF2-202ENST00000343550 NHSL1Q5SYE7 1610 aa26.45■■□□□ 1.82
USF2-202ENST00000343550 ANKRD30BQ9BXX2 1392 aa26.44■■□□□ 1.82
USF2-202ENST00000343550 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
USF2-202ENST00000343550 ORAI2Q96SN7 254 aa26.41■■□□□ 1.82
USF2-202ENST00000343550 PNPLA6Q8IY17 1366 aa26.38■■□□□ 1.81
USF2-202ENST00000343550 STK26Q9P289 416 aa26.37■■□□□ 1.81
USF2-202ENST00000343550 AFF2P51816 1311 aa26.35■■□□□ 1.81
USF2-202ENST00000343550 SOS2Q07890 1332 aaPredicted RBP26.35■■□□□ 1.81
USF2-202ENST00000343550 RXRBP28702 533 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms