RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 UNC13BO14795 1591 aa15.5■□□□□ 0.07
SNRPD2-201ENST00000342669 HDGFP51858 240 aaKnown RBP15.49■□□□□ 0.07
SNRPD2-201ENST00000342669 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
SNRPD2-201ENST00000342669 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
SNRPD2-201ENST00000342669 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
SNRPD2-201ENST00000342669 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
SNRPD2-201ENST00000342669 E9PCH4 1651 aa15.47■□□□□ 0.07
SNRPD2-201ENST00000342669 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
SNRPD2-201ENST00000342669 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.06
SNRPD2-201ENST00000342669 NWD1Q149M9 1564 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 RIMS2Q9UQ26 1411 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 ITGAEP38570 1179 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 CHD2O14647 1828 aaKnown RBP15.45■□□□□ 0.06
SNRPD2-201ENST00000342669 FAM135BQ49AJ0 1406 aa15.44■□□□□ 0.06
SNRPD2-201ENST00000342669 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
SNRPD2-201ENST00000342669 RBM33Q96EV2 1170 aaKnown RBP15.44■□□□□ 0.06
SNRPD2-201ENST00000342669 NUP155O75694 1391 aa15.42■□□□□ 0.06
SNRPD2-201ENST00000342669 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
SNRPD2-201ENST00000342669 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
SNRPD2-201ENST00000342669 MSH6P52701 1360 aa15.41■□□□□ 0.06
SNRPD2-201ENST00000342669 TBX22Q9Y458 520 aa15.4■□□□□ 0.06
SNRPD2-201ENST00000342669 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
SNRPD2-201ENST00000342669 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
SNRPD2-201ENST00000342669 SLAIN2Q9P270 581 aa15.36■□□□□ 0.05
SNRPD2-201ENST00000342669 SPHKAPQ2M3C7 1700 aa15.36■□□□□ 0.05
SNRPD2-201ENST00000342669 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
SNRPD2-201ENST00000342669 PIK3R4Q99570 1358 aa15.35■□□□□ 0.05
SNRPD2-201ENST00000342669 ADAMTS13Q76LX8 1427 aa15.34■□□□□ 0.05
SNRPD2-201ENST00000342669 NCOA3Q9Y6Q9 1424 aa15.34■□□□□ 0.05
SNRPD2-201ENST00000342669 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
SNRPD2-201ENST00000342669 TRPM2O94759 1503 aa15.33■□□□□ 0.04
SNRPD2-201ENST00000342669 RGS17Q9UGC6 210 aaPredicted RBP15.32■□□□□ 0.04
SNRPD2-201ENST00000342669 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
SNRPD2-201ENST00000342669 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
SNRPD2-201ENST00000342669 ATF3P18847 181 aa15.3■□□□□ 0.04
SNRPD2-201ENST00000342669 CADPS2Q86UW7 1296 aa15.3■□□□□ 0.04
SNRPD2-201ENST00000342669 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
SNRPD2-201ENST00000342669 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
SNRPD2-201ENST00000342669 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
SNRPD2-201ENST00000342669 JCADQ9P266 1359 aa15.28■□□□□ 0.04
SNRPD2-201ENST00000342669 KIF1BO60333 1816 aa15.28■□□□□ 0.04
SNRPD2-201ENST00000342669 SETBP1Q9Y6X0 1596 aa15.27■□□□□ 0.03
SNRPD2-201ENST00000342669 PTPRUQ92729 1446 aa15.26■□□□□ 0.03
SNRPD2-201ENST00000342669 COL16A1Q07092 1604 aaPredicted RBP15.26■□□□□ 0.03
SNRPD2-201ENST00000342669 NRXN3Q9Y4C0 1643 aa15.26■□□□□ 0.03
SNRPD2-201ENST00000342669 NAIPQ13075 1403 aa15.26■□□□□ 0.03
SNRPD2-201ENST00000342669 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
SNRPD2-201ENST00000342669 XRN1Q8IZH2 1706 aaKnown RBP15.24■□□□□ 0.03
SNRPD2-201ENST00000342669 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
SNRPD2-201ENST00000342669 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
SNRPD2-201ENST00000342669 AHDC1Q5TGY3 1603 aaPredicted RBP15.23■□□□□ 0.03
SNRPD2-201ENST00000342669 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
SNRPD2-201ENST00000342669 DCCP43146 1447 aa15.21■□□□□ 0.03
SNRPD2-201ENST00000342669 METP08581 1390 aa15.21■□□□□ 0.02
SNRPD2-201ENST00000342669 SPATA31A6Q5VVP1 1343 aa15.2■□□□□ 0.02
SNRPD2-201ENST00000342669 SHPRHQ149N8 1683 aa15.2■□□□□ 0.02
SNRPD2-201ENST00000342669 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
SNRPD2-201ENST00000342669 MEX3CQ5U5Q3 659 aaKnown RBP15.19■□□□□ 0.02
SNRPD2-201ENST00000342669 HFM1A2PYH4 1435 aa15.18■□□□□ 0.02
SNRPD2-201ENST00000342669 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
SNRPD2-201ENST00000342669 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
SNRPD2-201ENST00000342669 LRP6O75581 1613 aa15.16■□□□□ 0.02
SNRPD2-201ENST00000342669 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
SNRPD2-201ENST00000342669 MST1RQ04912 1400 aa15.16■□□□□ 0.02
SNRPD2-201ENST00000342669 ADGRL3Q9HAR2 1447 aa15.16■□□□□ 0.02
SNRPD2-201ENST00000342669 NALCNQ8IZF0 1738 aa15.15■□□□□ 0.02
SNRPD2-201ENST00000342669 NHSL1Q5SYE7 1610 aa15.15■□□□□ 0.02
SNRPD2-201ENST00000342669 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
SNRPD2-201ENST00000342669 ZNF772Q68DY9 489 aaPredicted RBP15.14■□□□□ 0.01
SNRPD2-201ENST00000342669 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
SNRPD2-201ENST00000342669 PPLO60437 1756 aa15.13■□□□□ 0.01
SNRPD2-201ENST00000342669 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
SNRPD2-201ENST00000342669 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
SNRPD2-201ENST00000342669 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
SNRPD2-201ENST00000342669 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
SNRPD2-201ENST00000342669 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
SNRPD2-201ENST00000342669 MSH5O43196 834 aa15.11■□□□□ 0.01
SNRPD2-201ENST00000342669 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
SNRPD2-201ENST00000342669 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
SNRPD2-201ENST00000342669 DDX17Q92841 729 aaKnown RBP15.08■□□□□ 0
SNRPD2-201ENST00000342669 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
SNRPD2-201ENST00000342669 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
SNRPD2-201ENST00000342669 RXRBP28702 533 aa15.06■□□□□ 0
SNRPD2-201ENST00000342669 PRAG1Q86YV5 1406 aa15.06■□□□□ 0
SNRPD2-201ENST00000342669 RGL3Q3MIN7 710 aa15.05■□□□□ -0
SNRPD2-201ENST00000342669 MPHOSPH9Q99550 1183 aa15.05■□□□□ -0
SNRPD2-201ENST00000342669 AFF2P51816 1311 aa15.05■□□□□ -0
SNRPD2-201ENST00000342669 PNPLA6Q8IY17 1366 aa15.05■□□□□ -0
SNRPD2-201ENST00000342669 LAMC1P11047 1609 aa15.04■□□□□ -0
SNRPD2-201ENST00000342669 ORAI2Q96SN7 254 aa15.03■□□□□ -0
SNRPD2-201ENST00000342669 IFT172Q9UG01 1749 aa15.03■□□□□ -0
SNRPD2-201ENST00000342669 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
SNRPD2-201ENST00000342669 ADGRF5Q8IZF2 1346 aa15.02■□□□□ -0
SNRPD2-201ENST00000342669 C8orf37Q96NL8 207 aa15.02■□□□□ -0
SNRPD2-201ENST00000342669 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
SNRPD2-201ENST00000342669 SOS2Q07890 1332 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms