RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 RRP12Q5JTH9 1297 aaKnown RBP17.72■□□□□ 0.43
PDPK1-202ENST00000342085 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
PDPK1-202ENST00000342085 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
PDPK1-202ENST00000342085 FOSBP53539 338 aa17.72■□□□□ 0.43
PDPK1-202ENST00000342085 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
PDPK1-202ENST00000342085 SPDYE4A6NLX3 237 aa17.71■□□□□ 0.43
PDPK1-202ENST00000342085 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
PDPK1-202ENST00000342085 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
PDPK1-202ENST00000342085 CCDC97Q96F63 343 aaPredicted RBP17.71■□□□□ 0.43
PDPK1-202ENST00000342085 MINK1Q8N4C8 1332 aaPredicted RBP17.71■□□□□ 0.43
PDPK1-202ENST00000342085 RBM5P52756 815 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDPK1-202ENST00000342085 PHF14O94880 888 aa17.7■□□□□ 0.42
PDPK1-202ENST00000342085 NUTM2GQ5VZR2 741 aa17.7■□□□□ 0.42
PDPK1-202ENST00000342085 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
PDPK1-202ENST00000342085 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
PDPK1-202ENST00000342085 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
PDPK1-202ENST00000342085 KDM4AO75164 1064 aa17.69■□□□□ 0.42
PDPK1-202ENST00000342085 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
PDPK1-202ENST00000342085 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
PDPK1-202ENST00000342085 EEA1Q15075 1411 aa17.68■□□□□ 0.42
PDPK1-202ENST00000342085 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
PDPK1-202ENST00000342085 ANO2Q9NQ90 1003 aa17.68■□□□□ 0.42
PDPK1-202ENST00000342085 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
PDPK1-202ENST00000342085 RCAN3Q9UKA8 241 aa17.68■□□□□ 0.42
PDPK1-202ENST00000342085 FHAD1B1AJZ9 1412 aa17.67■□□□□ 0.42
PDPK1-202ENST00000342085 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDPK1-202ENST00000342085 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
PDPK1-202ENST00000342085 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
PDPK1-202ENST00000342085 FAM69CQ0P6D2 419 aa17.66■□□□□ 0.42
PDPK1-202ENST00000342085 CUX2O14529 1486 aa17.66■□□□□ 0.42
PDPK1-202ENST00000342085 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
PDPK1-202ENST00000342085 ANKRD45Q5TZF3 282 aa17.65■□□□□ 0.42
PDPK1-202ENST00000342085 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
PDPK1-202ENST00000342085 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
PDPK1-202ENST00000342085 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
PDPK1-202ENST00000342085 MPHOSPH10O00566 681 aaKnown RBP17.64■□□□□ 0.41
PDPK1-202ENST00000342085 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
PDPK1-202ENST00000342085 RUFY2Q8WXA3 655 aa17.64■□□□□ 0.41
PDPK1-202ENST00000342085 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
PDPK1-202ENST00000342085 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
PDPK1-202ENST00000342085 OFD1O75665 1012 aa17.63■□□□□ 0.41
PDPK1-202ENST00000342085 SAFBQ15424 915 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDPK1-202ENST00000342085 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
PDPK1-202ENST00000342085 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
PDPK1-202ENST00000342085 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
PDPK1-202ENST00000342085 WDHD1O75717 1129 aaPredicted RBP17.6■□□□□ 0.41
PDPK1-202ENST00000342085 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
PDPK1-202ENST00000342085 RALBP1Q15311 655 aa17.6■□□□□ 0.41
PDPK1-202ENST00000342085 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
PDPK1-202ENST00000342085 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
PDPK1-202ENST00000342085 RDXP35241 583 aaKnown RBP17.59■□□□□ 0.41
PDPK1-202ENST00000342085 ZNF592Q92610 1267 aa17.59■□□□□ 0.41
PDPK1-202ENST00000342085 VGFO15240 615 aaPredicted RBP17.59■□□□□ 0.41
PDPK1-202ENST00000342085 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
PDPK1-202ENST00000342085 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
PDPK1-202ENST00000342085 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
PDPK1-202ENST00000342085 ATP6V1DQ9Y5K8 247 aa17.57■□□□□ 0.4
PDPK1-202ENST00000342085 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-202ENST00000342085 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
PDPK1-202ENST00000342085 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
PDPK1-202ENST00000342085 KRT18P05783 430 aaKnown RBP17.56■□□□□ 0.4
PDPK1-202ENST00000342085 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
PDPK1-202ENST00000342085 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
PDPK1-202ENST00000342085 SYCP1Q15431 976 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
PDPK1-202ENST00000342085 GPS2Q13227 327 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 RNF20Q5VTR2 975 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 MPHOSPH9Q99550 1183 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
PDPK1-202ENST00000342085 NEBLO76041 1014 aa17.54■□□□□ 0.4
PDPK1-202ENST00000342085 MATR3P43243 847 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDPK1-202ENST00000342085 XBP1P17861 261 aa17.54■□□□□ 0.4
PDPK1-202ENST00000342085 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
PDPK1-202ENST00000342085 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
PDPK1-202ENST00000342085 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 STK11IPQ8N1F8 1099 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
PDPK1-202ENST00000342085 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.4
PDPK1-202ENST00000342085 CCDC173Q0VFZ6 552 aa17.52■□□□□ 0.4
PDPK1-202ENST00000342085 HOMER1Q86YM7 354 aa17.52■□□□□ 0.39
PDPK1-202ENST00000342085 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
PDPK1-202ENST00000342085 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
PDPK1-202ENST00000342085 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
PDPK1-202ENST00000342085 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
PDPK1-202ENST00000342085 PLCD3Q8N3E9 789 aa17.5■□□□□ 0.39
PDPK1-202ENST00000342085 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
PDPK1-202ENST00000342085 GRM1Q13255 1194 aa17.5■□□□□ 0.39
PDPK1-202ENST00000342085 AK7Q96M32 723 aa17.49■□□□□ 0.39
PDPK1-202ENST00000342085 ZHX3Q9H4I2 956 aa17.49■□□□□ 0.39
PDPK1-202ENST00000342085 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
PDPK1-202ENST00000342085 CDR1P51861 262 aa17.48■□□□□ 0.39
PDPK1-202ENST00000342085 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
PDPK1-202ENST00000342085 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
PDPK1-202ENST00000342085 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
PDPK1-202ENST00000342085 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
PDPK1-202ENST00000342085 NEFHP12036 1026 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms