RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GPATCH3Q96I76 525 aa24.61■■□□□ 1.53
SEMA6C-201ENST00000341697 CAMSAP2Q08AD1 1489 aa24.6■■□□□ 1.53
SEMA6C-201ENST00000341697 TCERG1O14776 1098 aaKnown RBP24.6■■□□□ 1.53
SEMA6C-201ENST00000341697 RIPK4P57078 832 aa24.6■■□□□ 1.53
SEMA6C-201ENST00000341697 PROSER2Q86WR7 435 aaPredicted RBP24.6■■□□□ 1.53
SEMA6C-201ENST00000341697 NLRP6P59044 892 aa24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 RUNDC1Q96C34 613 aa24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 TTC5Q8N0Z6 440 aa24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 MAP3K1Q13233 1512 aa24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 NAIPQ13075 1403 aa24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 CDK11BP21127 795 aaKnown RBP24.59■■□□□ 1.53
SEMA6C-201ENST00000341697 WASHC2AQ641Q2 1341 aa24.58■■□□□ 1.53
SEMA6C-201ENST00000341697 ADGRL1O94910 1474 aa24.58■■□□□ 1.52
SEMA6C-201ENST00000341697 BCL2L13Q9BXK5 485 aa24.57■■□□□ 1.52
SEMA6C-201ENST00000341697 NOP58Q9Y2X3 529 aaKnown RBP24.57■■□□□ 1.52
SEMA6C-201ENST00000341697 ZKSCAN2Q63HK3 967 aa24.57■■□□□ 1.52
SEMA6C-201ENST00000341697 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
SEMA6C-201ENST00000341697 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
SEMA6C-201ENST00000341697 ANKRD30BQ9BXX2 1392 aa24.56■■□□□ 1.52
SEMA6C-201ENST00000341697 GTF2E1P29083 439 aaPredicted RBP24.56■■□□□ 1.52
SEMA6C-201ENST00000341697 NBPF8Q3BBV2 869 aa24.56■■□□□ 1.52
SEMA6C-201ENST00000341697 ANKLE2Q86XL3 938 aa24.55■■□□□ 1.52
SEMA6C-201ENST00000341697 NUTM2GQ5VZR2 741 aa24.54■■□□□ 1.52
SEMA6C-201ENST00000341697 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
SEMA6C-201ENST00000341697 RAPGEF4Q8WZA2 1011 aa24.53■■□□□ 1.52
SEMA6C-201ENST00000341697 ABCC5O15440 1437 aa24.53■■□□□ 1.52
SEMA6C-201ENST00000341697 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
SEMA6C-201ENST00000341697 TRIM44Q96DX7 344 aaPredicted RBP24.51■■□□□ 1.51
SEMA6C-201ENST00000341697 HMOX1P09601 288 aa24.51■■□□□ 1.51
SEMA6C-201ENST00000341697 TRIM6-TRIM34B2RNG4 842 aa24.51■■□□□ 1.51
SEMA6C-201ENST00000341697 ABTB2Q8N961 1025 aa24.5■■□□□ 1.51
SEMA6C-201ENST00000341697 EIF2S2P20042 333 aaKnown RBP24.5■■□□□ 1.51
SEMA6C-201ENST00000341697 MTHFSP49914 203 aa24.49■■□□□ 1.51
SEMA6C-201ENST00000341697 MEX3CQ5U5Q3 659 aaKnown RBP24.49■■□□□ 1.51
SEMA6C-201ENST00000341697 CDK19Q9BWU1 502 aa24.49■■□□□ 1.51
SEMA6C-201ENST00000341697 NLRP2Q9NX02 1062 aa24.48■■□□□ 1.51
SEMA6C-201ENST00000341697 NEXNQ0ZGT2 675 aa24.48■■□□□ 1.51
SEMA6C-201ENST00000341697 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
SEMA6C-201ENST00000341697 RRP1P56182 461 aaKnown RBP24.47■■□□□ 1.51
SEMA6C-201ENST00000341697 GOLGA6L4A6NEF3 574 aa24.47■■□□□ 1.51
SEMA6C-201ENST00000341697 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
SEMA6C-201ENST00000341697 GNAI1P63096 354 aa24.47■■□□□ 1.51
SEMA6C-201ENST00000341697 PLIN1O60240 522 aa24.46■■□□□ 1.51
SEMA6C-201ENST00000341697 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
SEMA6C-201ENST00000341697 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.51
SEMA6C-201ENST00000341697 AKNAQ7Z591 1439 aa24.45■■□□□ 1.5
SEMA6C-201ENST00000341697 ISY1Q9ULR0 285 aaKnown RBP24.45■■□□□ 1.5
SEMA6C-201ENST00000341697 SYTL4Q96C24 671 aaPredicted RBP24.44■■□□□ 1.5
SEMA6C-201ENST00000341697 API5Q9BZZ5 524 aaKnown RBP24.43■■□□□ 1.5
SEMA6C-201ENST00000341697 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
SEMA6C-201ENST00000341697 SPRYD3Q8NCJ5 442 aa24.43■■□□□ 1.5
SEMA6C-201ENST00000341697 PTMAP06454 111 aaKnown RBP24.43■■□□□ 1.5
SEMA6C-201ENST00000341697 TSPYL4Q9UJ04 414 aa24.42■■□□□ 1.5
SEMA6C-201ENST00000341697 FANCAO15360 1455 aa24.42■■□□□ 1.5
SEMA6C-201ENST00000341697 PPP2R1AP30153 589 aa24.42■■□□□ 1.5
SEMA6C-201ENST00000341697 COG6Q9Y2V7 657 aa24.42■■□□□ 1.5
SEMA6C-201ENST00000341697 RTEL1-TNFRSF6BF6WH68 1400 aa24.42■■□□□ 1.5
SEMA6C-201ENST00000341697 MFAP1P55081 439 aaKnown RBP24.41■■□□□ 1.5
SEMA6C-201ENST00000341697 DENND4BO75064 1496 aaPredicted RBP24.41■■□□□ 1.5
SEMA6C-201ENST00000341697 DDX58O95786 925 aaKnown RBP24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 G3V3G9 751 aa24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 DCAF8Q5TAQ9 597 aa24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 ADAMTS8Q9UP79 889 aa24.4■■□□□ 1.5
SEMA6C-201ENST00000341697 NECTIN2Q92692 538 aa24.39■■□□□ 1.5
SEMA6C-201ENST00000341697 C9orf78Q9NZ63 289 aaPredicted RBP24.39■■□□□ 1.5
SEMA6C-201ENST00000341697 DDX19BQ9UMR2 479 aa24.39■■□□□ 1.5
SEMA6C-201ENST00000341697 NCOA1Q15788 1441 aa24.39■■□□□ 1.5
SEMA6C-201ENST00000341697 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
SEMA6C-201ENST00000341697 FRAT2O75474 233 aaPredicted RBP24.37■■□□□ 1.49
SEMA6C-201ENST00000341697 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
SEMA6C-201ENST00000341697 DZIP1LQ8IYY4 767 aaKnown RBP24.37■■□□□ 1.49
SEMA6C-201ENST00000341697 FKBP5Q13451 457 aaPredicted RBP24.36■■□□□ 1.49
SEMA6C-201ENST00000341697 GNL2Q13823 731 aaKnown RBP24.36■■□□□ 1.49
SEMA6C-201ENST00000341697 ANKRD45Q5TZF3 282 aa24.35■■□□□ 1.49
SEMA6C-201ENST00000341697 ATAD2Q6PL18 1390 aa24.35■■□□□ 1.49
SEMA6C-201ENST00000341697 KIF16BQ96L93 1317 aa24.34■■□□□ 1.49
SEMA6C-201ENST00000341697 TULP1O00294 542 aaPredicted RBP24.34■■□□□ 1.49
SEMA6C-201ENST00000341697 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
SEMA6C-201ENST00000341697 TCP11L2Q8N4U5 519 aa24.34■■□□□ 1.49
SEMA6C-201ENST00000341697 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.48
SEMA6C-201ENST00000341697 PLCB2Q00722 1185 aa24.32■■□□□ 1.48
SEMA6C-201ENST00000341697 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
SEMA6C-201ENST00000341697 RAPGEF6Q8TEU7 1601 aa24.31■■□□□ 1.48
SEMA6C-201ENST00000341697 MSH5O43196 834 aa24.31■■□□□ 1.48
SEMA6C-201ENST00000341697 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
SEMA6C-201ENST00000341697 ATP10BO94823 1461 aa24.3■■□□□ 1.48
SEMA6C-201ENST00000341697 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
SEMA6C-201ENST00000341697 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
SEMA6C-201ENST00000341697 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
SEMA6C-201ENST00000341697 DHX29Q7Z478 1369 aaKnown RBP24.28■■□□□ 1.48
SEMA6C-201ENST00000341697 FBXO31Q5XUX0 539 aaPredicted RBP24.27■■□□□ 1.48
SEMA6C-201ENST00000341697 ASXL2Q76L83 1435 aa24.26■■□□□ 1.47
SEMA6C-201ENST00000341697 RILPL2Q969X0 211 aa24.26■■□□□ 1.47
SEMA6C-201ENST00000341697 CCDC61Q9Y6R9 512 aa24.26■■□□□ 1.47
SEMA6C-201ENST00000341697 IDI1Q13907 227 aa24.25■■□□□ 1.47
SEMA6C-201ENST00000341697 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
SEMA6C-201ENST00000341697 PLCH2O75038 1416 aa24.24■■□□□ 1.47
SEMA6C-201ENST00000341697 GBP4Q96PP9 640 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms