RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
CDK13-202ENST00000340829 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
CDK13-202ENST00000340829 MSNP26038 577 aaKnown RBP24.11■■□□□ 1.45
CDK13-202ENST00000340829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.11■■□□□ 1.45
CDK13-202ENST00000340829 SUPT6HQ7KZ85 1726 aaKnown RBP24.11■■□□□ 1.45
CDK13-202ENST00000340829 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
CDK13-202ENST00000340829 FAM69CQ0P6D2 419 aa24.11■■□□□ 1.45
CDK13-202ENST00000340829 DZIP1LQ8IYY4 767 aaKnown RBP24.11■■□□□ 1.45
CDK13-202ENST00000340829 CHMP3Q9Y3E7 222 aa24.1■■□□□ 1.45
CDK13-202ENST00000340829 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
CDK13-202ENST00000340829 PTMSP20962 102 aa24.09■■□□□ 1.45
CDK13-202ENST00000340829 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
CDK13-202ENST00000340829 DDX19BQ9UMR2 479 aa24.08■■□□□ 1.45
CDK13-202ENST00000340829 GOLGA6L3A6NEY3 463 aa24.06■■□□□ 1.44
CDK13-202ENST00000340829 PANK1Q8TE04 598 aa24.06■■□□□ 1.44
CDK13-202ENST00000340829 GPATCH3Q96I76 525 aa24.06■■□□□ 1.44
CDK13-202ENST00000340829 MTHFSP49914 203 aa24.06■■□□□ 1.44
CDK13-202ENST00000340829 HMOX1P09601 288 aa24.05■■□□□ 1.44
CDK13-202ENST00000340829 HDAC5Q9UQL6 1122 aa24.05■■□□□ 1.44
CDK13-202ENST00000340829 GOLGA6L6A8MZA4 724 aa24.05■■□□□ 1.44
CDK13-202ENST00000340829 PNISRQ8TF01 805 aaKnown RBP24.02■■□□□ 1.44
CDK13-202ENST00000340829 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
CDK13-202ENST00000340829 GORABQ5T7V8 394 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 DRC7Q8IY82 874 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 ST18O60284 1047 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 KIAA0586Q9BVV6 1533 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 TCP11L2Q8N4U5 519 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
CDK13-202ENST00000340829 USP35Q9P2H5 1018 aa24■■□□□ 1.43
CDK13-202ENST00000340829 AKNAQ7Z591 1439 aa24■■□□□ 1.43
CDK13-202ENST00000340829 FOXD4L5Q5VV16 416 aaPredicted RBP23.99■■□□□ 1.43
CDK13-202ENST00000340829 FOXD4L4Q8WXT5 416 aaPredicted RBP23.99■■□□□ 1.43
CDK13-202ENST00000340829 NECTIN2Q92692 538 aa23.99■■□□□ 1.43
CDK13-202ENST00000340829 SCAPERQ9BY12 1400 aa23.98■■□□□ 1.43
CDK13-202ENST00000340829 GNL2Q13823 731 aaKnown RBP23.98■■□□□ 1.43
CDK13-202ENST00000340829 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
CDK13-202ENST00000340829 NRDCO43847 1150 aa23.98■■□□□ 1.43
CDK13-202ENST00000340829 TEFQ10587 303 aa23.97■■□□□ 1.43
CDK13-202ENST00000340829 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.434e-6■□□□□ 10.4
CDK13-202ENST00000340829 API5Q9BZZ5 524 aaKnown RBP23.97■■□□□ 1.43
CDK13-202ENST00000340829 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
CDK13-202ENST00000340829 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
CDK13-202ENST00000340829 EIF2S2P20042 333 aaKnown RBP23.96■■□□□ 1.43
CDK13-202ENST00000340829 TAF7LQ5H9L4 462 aa23.96■■□□□ 1.43
CDK13-202ENST00000340829 ROCK1Q13464 1354 aa23.96■■□□□ 1.43
CDK13-202ENST00000340829 C1orf141Q5JVX7 400 aa23.95■■□□□ 1.42
CDK13-202ENST00000340829 SYAP1Q96A49 352 aaPredicted RBP23.95■■□□□ 1.42
CDK13-202ENST00000340829 PLEKHH2Q8IVE3 1493 aa23.95■■□□□ 1.42
CDK13-202ENST00000340829 KIF16BQ96L93 1317 aa23.94■■□□□ 1.42
CDK13-202ENST00000340829 GNAI1P63096 354 aa23.94■■□□□ 1.42
CDK13-202ENST00000340829 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
CDK13-202ENST00000340829 CHAF1AQ13111 956 aaPredicted RBP23.93■■□□□ 1.42
CDK13-202ENST00000340829 LNPKQ9C0E8 428 aa23.92■■□□□ 1.42
CDK13-202ENST00000340829 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
CDK13-202ENST00000340829 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
CDK13-202ENST00000340829 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
CDK13-202ENST00000340829 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
CDK13-202ENST00000340829 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
CDK13-202ENST00000340829 PTPN23Q9H3S7 1636 aa23.9■■□□□ 1.42
CDK13-202ENST00000340829 CUL7Q14999 1698 aa23.9■■□□□ 1.42
CDK13-202ENST00000340829 ANKRD30BQ9BXX2 1392 aa23.89■■□□□ 1.42
CDK13-202ENST00000340829 PRAM1Q96QH2 718 aa23.89■■□□□ 1.42
CDK13-202ENST00000340829 DDX11L8A8MPP1 907 aa23.89■■□□□ 1.42
CDK13-202ENST00000340829 GSE1Q14687 1217 aa23.89■■□□□ 1.42
CDK13-202ENST00000340829 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
CDK13-202ENST00000340829 FKBP5Q13451 457 aaPredicted RBP23.88■■□□□ 1.41
CDK13-202ENST00000340829 PLB1Q6P1J6 1458 aa23.88■■□□□ 1.41
CDK13-202ENST00000340829 ABCC5O15440 1437 aa23.88■■□□□ 1.41
CDK13-202ENST00000340829 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
CDK13-202ENST00000340829 TSPYL4Q9UJ04 414 aa23.86■■□□□ 1.41
CDK13-202ENST00000340829 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
CDK13-202ENST00000340829 BCAR3O75815 825 aa23.86■■□□□ 1.41
CDK13-202ENST00000340829 PSME1Q06323 249 aa23.86■■□□□ 1.41
CDK13-202ENST00000340829 CAMSAP2Q08AD1 1489 aa23.86■■□□□ 1.41
CDK13-202ENST00000340829 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
CDK13-202ENST00000340829 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
CDK13-202ENST00000340829 FOXD4L6Q3SYB3 417 aaPredicted RBP23.84■■□□□ 1.41
CDK13-202ENST00000340829 FOXD4L3Q6VB84 417 aaPredicted RBP23.84■■□□□ 1.41
CDK13-202ENST00000340829 EXOSC9Q06265 439 aaKnown RBP23.84■■□□□ 1.41
CDK13-202ENST00000340829 C9orf78Q9NZ63 289 aaPredicted RBP23.84■■□□□ 1.41
CDK13-202ENST00000340829 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
CDK13-202ENST00000340829 DDX49Q9Y6V7 483 aaKnown RBP23.84■■□□□ 1.41
CDK13-202ENST00000340829 ISY1Q9ULR0 285 aaKnown RBP23.83■■□□□ 1.41
CDK13-202ENST00000340829 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
CDK13-202ENST00000340829 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
CDK13-202ENST00000340829 SMG6Q86US8 1419 aaKnown RBP23.82■■□□□ 1.4
CDK13-202ENST00000340829 RAPGEF3O95398 923 aa23.82■■□□□ 1.4
CDK13-202ENST00000340829 TSR2Q969E8 191 aaKnown RBP23.81■■□□□ 1.4
CDK13-202ENST00000340829 REC8O95072 547 aa23.81■■□□□ 1.4
CDK13-202ENST00000340829 AAMPQ13685 434 aa23.81■■□□□ 1.4
CDK13-202ENST00000340829 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
CDK13-202ENST00000340829 C22orf23Q9BZE7 217 aa23.79■■□□□ 1.4
CDK13-202ENST00000340829 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
CDK13-202ENST00000340829 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
CDK13-202ENST00000340829 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
CDK13-202ENST00000340829 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.78■■□□□ 1.4
CDK13-202ENST00000340829 NLRP6P59044 892 aa23.78■■□□□ 1.4
CDK13-202ENST00000340829 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
CDK13-202ENST00000340829 TTC5Q8N0Z6 440 aa23.78■■□□□ 1.4
CDK13-202ENST00000340829 CABP1Q9NZU7 370 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms