RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 SPDYE16A6NNV3 312 aaPredicted RBP4.13□□□□□ -1.75
CCDC30-201ENST00000340612 C6orf132Q5T0Z8 1188 aa4.13□□□□□ -1.75
CCDC30-201ENST00000340612 SAMD7Q7Z3H4 446 aa4.13□□□□□ -1.75
CCDC30-201ENST00000340612 KRI1Q8N9T8 703 aaKnown RBP4.13□□□□□ -1.75
CCDC30-201ENST00000340612 AAASQ9NRG9 546 aa4.13□□□□□ -1.75
CCDC30-201ENST00000340612 SMAPO00193 183 aa4.12□□□□□ -1.75
CCDC30-201ENST00000340612 ONECUT3O60422 494 aaPredicted RBP4.12□□□□□ -1.75
CCDC30-201ENST00000340612 TYW1BQ6NUM6 668 aa4.12□□□□□ -1.75
CCDC30-201ENST00000340612 NUTM2FA1L443 756 aa4.12□□□□□ -1.75
CCDC30-201ENST00000340612 GPR37O15354 613 aa4.12□□□□□ -1.75
CCDC30-201ENST00000340612 NFX1Q12986 1120 aaKnown RBP4.12□□□□□ -1.75
CCDC30-201ENST00000340612 TNFRSF10AO00220 468 aa4.11□□□□□ -1.75
CCDC30-201ENST00000340612 PRIM1P49642 420 aaKnown RBP4.11□□□□□ -1.75
CCDC30-201ENST00000340612 APLP1P51693 650 aa4.11□□□□□ -1.75
CCDC30-201ENST00000340612 TSKSQ9UJT2 592 aa4.11□□□□□ -1.75
CCDC30-201ENST00000340612 SLC19A1P41440 591 aa4.11□□□□□ -1.75
CCDC30-201ENST00000340612 C3orf80F5H4A9 247 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 WIPF1O43516 503 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 OSBPP22059 807 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 COPS2P61201 443 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 FBXW7Q969H0 707 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 RBM33Q96EV2 1170 aaKnown RBP4.1□□□□□ -1.75
CCDC30-201ENST00000340612 PHF14O94880 888 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 FECHP22830 423 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 SUZ12Q15022 739 aaKnown RBP4.1□□□□□ -1.75
CCDC30-201ENST00000340612 AK7Q96M32 723 aa4.1□□□□□ -1.75
CCDC30-201ENST00000340612 SPRYD7Q5W111 196 aa4.09□□□□□ -1.75
CCDC30-201ENST00000340612 LMTK3Q96Q04 1460 aa4.09□□□□□ -1.75
CCDC30-201ENST00000340612 INSM1Q01101 510 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-201ENST00000340612 RNF223E7ERA6 249 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 TRIM66O15016 1216 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PRR20EP86478 221 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PRR20CP86479 221 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PRR20DP86480 221 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PRR20BP86481 221 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PRR20AP86496 221 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 IL27Q8NEV9 243 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 GMPR2Q9P2T1 348 aaKnown RBP4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PDE4DQ08499 809 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 GDF9O60383 454 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 RNF40O75150 1001 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 GGCXP38435 758 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 ZNF598Q86UK7 904 aaKnown RBP4.08□□□□□ -1.76
CCDC30-201ENST00000340612 KDM4CQ9H3R0 1056 aa4.08□□□□□ -1.76
CCDC30-201ENST00000340612 PPEF1O14829 653 aaPredicted RBP4.07□□□□□ -1.76
CCDC30-201ENST00000340612 LIAT1Q6ZQX7 453 aa4.07□□□□□ -1.76
CCDC30-201ENST00000340612 CCDC102AQ96A19 550 aa4.07□□□□□ -1.76
CCDC30-201ENST00000340612 CDHR5Q9HBB8 845 aa4.07□□□□□ -1.76
CCDC30-201ENST00000340612 FAM198AQ9UFP1 575 aa4.07□□□□□ -1.76
CCDC30-201ENST00000340612 TMUB1Q9BVT8 246 aa4.07□□□□□ -1.76
CCDC30-201ENST00000340612 C11orf95C9JLR9 678 aaPredicted RBP4.06□□□□□ -1.76
CCDC30-201ENST00000340612 ZNF697Q5TEC3 545 aa4.06□□□□□ -1.76
CCDC30-201ENST00000340612 PACS2Q86VP3 889 aa4.06□□□□□ -1.76
CCDC30-201ENST00000340612 GNPATO15228 680 aa4.06□□□□□ -1.76
CCDC30-201ENST00000340612 TSR1Q2NL82 804 aaKnown RBP4.06□□□□□ -1.76
CCDC30-201ENST00000340612 C14orf37Q86TY3 774 aa4.06□□□□□ -1.76
CCDC30-201ENST00000340612 MAP2K5Q13163 448 aa4.05□□□□□ -1.76
CCDC30-201ENST00000340612 IRF6O14896 467 aa4.05□□□□□ -1.76
CCDC30-201ENST00000340612 FCHSD2O94868 740 aa4.05□□□□□ -1.76
CCDC30-201ENST00000340612 FAM117AQ9C073 453 aa4.05□□□□□ -1.76
CCDC30-201ENST00000340612 MAP3K7O43318 606 aa4.04□□□□□ -1.76
CCDC30-201ENST00000340612 ZPR1O75312 459 aa4.04□□□□□ -1.76
CCDC30-201ENST00000340612 PTGDRQ13258 359 aa4.04□□□□□ -1.76
CCDC30-201ENST00000340612 HIC1Q14526 733 aa4.04□□□□□ -1.76
CCDC30-201ENST00000340612 MINK1Q8N4C8 1332 aaPredicted RBP4.04□□□□□ -1.76
CCDC30-201ENST00000340612 TLL1O43897 1013 aa4.03□□□□□ -1.76
CCDC30-201ENST00000340612 FAM161AQ3B820 660 aa4.03□□□□□ -1.76
CCDC30-201ENST00000340612 PARP9Q8IXQ6 854 aa4.03□□□□□ -1.76
CCDC30-201ENST00000340612 EPAS1Q99814 870 aa4.03□□□□□ -1.76
CCDC30-201ENST00000340612 EN1Q05925 392 aaPredicted RBP4.03□□□□□ -1.76
CCDC30-201ENST00000340612 NPDC1Q9NQX5 325 aaPredicted RBP4.03□□□□□ -1.76
CCDC30-201ENST00000340612 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
CCDC30-201ENST00000340612 NLRP7Q8WX94 980 aa4.02□□□□□ -1.77
CCDC30-201ENST00000340612 TTBK1Q5TCY1 1321 aaPredicted RBP4.02□□□□□ -1.77
CCDC30-201ENST00000340612 TTLL12Q14166 644 aaPredicted RBP4.02□□□□□ -1.77
CCDC30-201ENST00000340612 PLA2G2CQ5R387 149 aa4.02□□□□□ -1.77
CCDC30-201ENST00000340612 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
CCDC30-201ENST00000340612 REPIN1Q9BWE0 567 aaKnown RBP4.02□□□□□ -1.77
CCDC30-201ENST00000340612 PLEKHG3A1L390 1219 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 FOXC1Q12948 553 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 TATDN2Q93075 761 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 TERTO14746 1132 aaKnown RBP4.01□□□□□ -1.77
CCDC30-201ENST00000340612 S1PR4O95977 384 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 SNRPBP14678 240 aaKnown RBP4.01□□□□□ -1.77
CCDC30-201ENST00000340612 CRIPAKQ8N1N5 446 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 PKD2L1Q9P0L9 805 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 PNMA3Q9UL41 463 aa4.01□□□□□ -1.77
CCDC30-201ENST00000340612 AMHR2Q16671 573 aa4□□□□□ -1.77
CCDC30-201ENST00000340612 PHOX2BQ99453 314 aa4□□□□□ -1.77
CCDC30-201ENST00000340612 BLOC1S3Q6QNY0 202 aa4□□□□□ -1.77
CCDC30-201ENST00000340612 ANKLE1Q8NAG6 615 aa4□□□□□ -1.77
CCDC30-201ENST00000340612 SUPT5HO00267 1087 aaKnown RBP3.99□□□□□ -1.77
CCDC30-201ENST00000340612 AXIN1O15169 862 aa3.99□□□□□ -1.77
CCDC30-201ENST00000340612 MS4A1P11836 297 aa3.99□□□□□ -1.77
CCDC30-201ENST00000340612 GIGYF2Q6Y7W6 1299 aaKnown RBP3.99□□□□□ -1.77
CCDC30-201ENST00000340612 PRSS12P56730 875 aa3.99□□□□□ -1.77
CCDC30-201ENST00000340612 MDM2Q00987 491 aaPredicted RBP3.98□□□□□ -1.77
CCDC30-201ENST00000340612 NUDT18Q6ZVK8 323 aa3.98□□□□□ -1.77
CCDC30-201ENST00000340612 AVPP01185 164 aa3.98□□□□□ -1.77
CCDC30-201ENST00000340612 SWT1Q5T5J6 900 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms