RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ADGRB3O60242 1522 aa20.34■□□□□ 0.85
NUDCD3-201ENST00000338427 E9PCH4 1651 aa20.33■□□□□ 0.85
NUDCD3-201ENST00000338427 RIMS2Q9UQ26 1411 aa20.33■□□□□ 0.84
NUDCD3-201ENST00000338427 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
NUDCD3-201ENST00000338427 TMEM94Q12767 1356 aa20.31■□□□□ 0.84
NUDCD3-201ENST00000338427 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
NUDCD3-201ENST00000338427 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
NUDCD3-201ENST00000338427 KDM5AP29375 1690 aaKnown RBP20.3■□□□□ 0.84
NUDCD3-201ENST00000338427 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
NUDCD3-201ENST00000338427 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
NUDCD3-201ENST00000338427 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
NUDCD3-201ENST00000338427 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
NUDCD3-201ENST00000338427 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
NUDCD3-201ENST00000338427 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
NUDCD3-201ENST00000338427 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
NUDCD3-201ENST00000338427 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
NUDCD3-201ENST00000338427 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
NUDCD3-201ENST00000338427 NAIPQ13075 1403 aa20.25■□□□□ 0.83
NUDCD3-201ENST00000338427 SOCS7O14512 581 aa20.22■□□□□ 0.83
NUDCD3-201ENST00000338427 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
NUDCD3-201ENST00000338427 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
NUDCD3-201ENST00000338427 FOXD1Q16676 465 aa20.17■□□□□ 0.82
NUDCD3-201ENST00000338427 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
NUDCD3-201ENST00000338427 AMOTL2Q9Y2J4 779 aa20.17■□□□□ 0.82
NUDCD3-201ENST00000338427 CHD2O14647 1828 aaKnown RBP20.16■□□□□ 0.82
NUDCD3-201ENST00000338427 MED1Q15648 1581 aaPredicted RBP20.16■□□□□ 0.82
NUDCD3-201ENST00000338427 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
NUDCD3-201ENST00000338427 PTPRUQ92729 1446 aa20.14■□□□□ 0.81
NUDCD3-201ENST00000338427 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
NUDCD3-201ENST00000338427 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
NUDCD3-201ENST00000338427 NWD1Q149M9 1564 aa20.13■□□□□ 0.81
NUDCD3-201ENST00000338427 MSH6P52701 1360 aa20.13■□□□□ 0.81
NUDCD3-201ENST00000338427 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
NUDCD3-201ENST00000338427 SPHKAPQ2M3C7 1700 aa20.11■□□□□ 0.81
NUDCD3-201ENST00000338427 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
NUDCD3-201ENST00000338427 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
NUDCD3-201ENST00000338427 RGS17Q9UGC6 210 aaPredicted RBP20.09■□□□□ 0.81
NUDCD3-201ENST00000338427 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
NUDCD3-201ENST00000338427 METP08581 1390 aa20.08■□□□□ 0.81
NUDCD3-201ENST00000338427 ROBO1Q9Y6N7 1651 aa20.07■□□□□ 0.8
NUDCD3-201ENST00000338427 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
NUDCD3-201ENST00000338427 PIK3R4Q99570 1358 aa20.06■□□□□ 0.8
NUDCD3-201ENST00000338427 ATF3P18847 181 aa20.04■□□□□ 0.8
NUDCD3-201ENST00000338427 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
NUDCD3-201ENST00000338427 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
NUDCD3-201ENST00000338427 TRPM2O94759 1503 aa20.02■□□□□ 0.8
NUDCD3-201ENST00000338427 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.79
NUDCD3-201ENST00000338427 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
NUDCD3-201ENST00000338427 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
NUDCD3-201ENST00000338427 NCOA3Q9Y6Q9 1424 aa20.01■□□□□ 0.79
NUDCD3-201ENST00000338427 DIP2AQ14689 1571 aa20■□□□□ 0.79
NUDCD3-201ENST00000338427 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
NUDCD3-201ENST00000338427 VGFO15240 615 aaPredicted RBP19.99■□□□□ 0.79
NUDCD3-201ENST00000338427 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
NUDCD3-201ENST00000338427 KIF1BO60333 1816 aa19.98■□□□□ 0.79
NUDCD3-201ENST00000338427 POTEAQ6S8J7 498 aa19.98■□□□□ 0.79
NUDCD3-201ENST00000338427 BRINP3Q76B58 766 aa19.97■□□□□ 0.79
NUDCD3-201ENST00000338427 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
NUDCD3-201ENST00000338427 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
NUDCD3-201ENST00000338427 RPGRIP1LQ68CZ1 1315 aa19.95■□□□□ 0.78
NUDCD3-201ENST00000338427 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
NUDCD3-201ENST00000338427 XRN1Q8IZH2 1706 aaKnown RBP19.92■□□□□ 0.78
NUDCD3-201ENST00000338427 JCADQ9P266 1359 aa19.92■□□□□ 0.78
NUDCD3-201ENST00000338427 STK26Q9P289 416 aa19.9■□□□□ 0.78
NUDCD3-201ENST00000338427 ROBO2Q9HCK4 1378 aa19.9■□□□□ 0.78
NUDCD3-201ENST00000338427 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
NUDCD3-201ENST00000338427 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.77
NUDCD3-201ENST00000338427 MST1RQ04912 1400 aa19.88■□□□□ 0.77
NUDCD3-201ENST00000338427 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
NUDCD3-201ENST00000338427 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
NUDCD3-201ENST00000338427 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
NUDCD3-201ENST00000338427 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
NUDCD3-201ENST00000338427 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
NUDCD3-201ENST00000338427 CCDC144AA2RUR9 1427 aa19.86■□□□□ 0.77
NUDCD3-201ENST00000338427 WAPLQ7Z5K2 1190 aa19.86■□□□□ 0.77
NUDCD3-201ENST00000338427 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
NUDCD3-201ENST00000338427 PPLO60437 1756 aa19.85■□□□□ 0.77
NUDCD3-201ENST00000338427 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
NUDCD3-201ENST00000338427 SETD1AO15047 1707 aaKnown RBP19.84■□□□□ 0.77
NUDCD3-201ENST00000338427 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
NUDCD3-201ENST00000338427 LRP6O75581 1613 aa19.83■□□□□ 0.76
NUDCD3-201ENST00000338427 MEX3CQ5U5Q3 659 aaKnown RBP19.82■□□□□ 0.76
NUDCD3-201ENST00000338427 DCCP43146 1447 aa19.82■□□□□ 0.76
NUDCD3-201ENST00000338427 AHDC1Q5TGY3 1603 aaPredicted RBP19.81■□□□□ 0.76
NUDCD3-201ENST00000338427 NUTM2FA1L443 756 aa19.81■□□□□ 0.76
NUDCD3-201ENST00000338427 NALCNQ8IZF0 1738 aa19.81■□□□□ 0.76
NUDCD3-201ENST00000338427 ASXL1Q8IXJ9 1541 aa19.81■□□□□ 0.76
NUDCD3-201ENST00000338427 SPATA31A6Q5VVP1 1343 aa19.8■□□□□ 0.76
NUDCD3-201ENST00000338427 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
NUDCD3-201ENST00000338427 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
NUDCD3-201ENST00000338427 LRRC59Q96AG4 307 aaKnown RBP19.79■□□□□ 0.76
NUDCD3-201ENST00000338427 ANKRD30BQ9BXX2 1392 aa19.77■□□□□ 0.76
NUDCD3-201ENST00000338427 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
NUDCD3-201ENST00000338427 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
NUDCD3-201ENST00000338427 C14orf93Q9H972 538 aaKnown RBP19.75■□□□□ 0.75
NUDCD3-201ENST00000338427 ESCO1Q5FWF5 840 aa19.74■□□□□ 0.75
NUDCD3-201ENST00000338427 KDM2AQ9Y2K7 1162 aa19.74■□□□□ 0.75
NUDCD3-201ENST00000338427 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
NUDCD3-201ENST00000338427 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
NUDCD3-201ENST00000338427 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms