RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 PROSER2Q86WR7 435 aaPredicted RBP37.58■■■■□ 3.61
CDKN3-202ENST00000335183 NWD1Q149M9 1564 aa37.56■■■■□ 3.6
CDKN3-202ENST00000335183 RBM33Q96EV2 1170 aaKnown RBP37.56■■■■□ 3.6
CDKN3-202ENST00000335183 TMEM131LA2VDJ0 1609 aa37.54■■■■□ 3.6
CDKN3-202ENST00000335183 E9PCH4 1651 aa37.54■■■■□ 3.6
CDKN3-202ENST00000335183 ZFYVE9O95405 1425 aa37.53■■■■□ 3.6
CDKN3-202ENST00000335183 NKTRP30414 1462 aaKnown RBP37.52■■■■□ 3.6
CDKN3-202ENST00000335183 PPP1R15AO75807 674 aaPredicted RBP37.52■■■■□ 3.6
CDKN3-202ENST00000335183 RIMS2Q9UQ26 1411 aa37.52■■■■□ 3.6
CDKN3-202ENST00000335183 FAM135BQ49AJ0 1406 aa37.51■■■■□ 3.59
CDKN3-202ENST00000335183 ROBO1Q9Y6N7 1651 aa37.5■■■■□ 3.59
CDKN3-202ENST00000335183 CHGAP10645 457 aaKnown RBP37.49■■■■□ 3.59
CDKN3-202ENST00000335183 CHD2O14647 1828 aaKnown RBP37.49■■■■□ 3.59
CDKN3-202ENST00000335183 ROCK1Q13464 1354 aa37.48■■■■□ 3.59
CDKN3-202ENST00000335183 PLEKHG1Q9ULL1 1385 aa37.48■■■■□ 3.59
CDKN3-202ENST00000335183 IQGAP3Q86VI3 1631 aa37.47■■■■□ 3.59
CDKN3-202ENST00000335183 HDGFP51858 240 aaKnown RBP37.47■■■■□ 3.59
CDKN3-202ENST00000335183 ITGAEP38570 1179 aa37.44■■■■□ 3.58
CDKN3-202ENST00000335183 MSH6P52701 1360 aa37.42■■■■□ 3.58
CDKN3-202ENST00000335183 PPARGC1BQ86YN6 1023 aaKnown RBP37.38■■■■□ 3.57
CDKN3-202ENST00000335183 NUTM2DQ5VT03 806 aaPredicted RBP37.37■■■■□ 3.57
CDKN3-202ENST00000335183 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.37■■■■□ 3.57
CDKN3-202ENST00000335183 NUP155O75694 1391 aa37.37■■■■□ 3.57
CDKN3-202ENST00000335183 TBX22Q9Y458 520 aa37.33■■■■□ 3.57
CDKN3-202ENST00000335183 PHLPP1O60346 1717 aa37.3■■■■□ 3.56
CDKN3-202ENST00000335183 RGS17Q9UGC6 210 aaPredicted RBP37.3■■■■□ 3.56
CDKN3-202ENST00000335183 SLAIN2Q9P270 581 aa37.29■■■■□ 3.56
CDKN3-202ENST00000335183 DIP2AQ14689 1571 aa37.29■■■■□ 3.56
CDKN3-202ENST00000335183 ADAMTS13Q76LX8 1427 aa37.28■■■■□ 3.56
CDKN3-202ENST00000335183 C14orf37Q86TY3 774 aa37.25■■■■□ 3.55
CDKN3-202ENST00000335183 SPHKAPQ2M3C7 1700 aa37.24■■■■□ 3.55
CDKN3-202ENST00000335183 TRPM2O94759 1503 aa37.2■■■■□ 3.55
CDKN3-202ENST00000335183 NCOA3Q9Y6Q9 1424 aa37.19■■■■□ 3.54
CDKN3-202ENST00000335183 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.19■■■■□ 3.54
CDKN3-202ENST00000335183 PIK3R4Q99570 1358 aa37.18■■■■□ 3.54
CDKN3-202ENST00000335183 COL16A1Q07092 1604 aaPredicted RBP37.12■■■■□ 3.53
CDKN3-202ENST00000335183 JCADQ9P266 1359 aa37.12■■■■□ 3.53
CDKN3-202ENST00000335183 AMOTL2Q9Y2J4 779 aa37.11■■■■□ 3.53
CDKN3-202ENST00000335183 NRXN3Q9Y4C0 1643 aa37.1■■■■□ 3.53
CDKN3-202ENST00000335183 ZNF326Q5BKZ1 582 aaKnown RBP37.1■■■■□ 3.53
CDKN3-202ENST00000335183 POTEAQ6S8J7 498 aa37.1■■■■□ 3.53
CDKN3-202ENST00000335183 CADPS2Q86UW7 1296 aa37.1■■■■□ 3.53
CDKN3-202ENST00000335183 C19orf44Q9H6X5 657 aa37.1■■■■□ 3.53
CDKN3-202ENST00000335183 PTPRUQ92729 1446 aa37.1■■■■□ 3.53
CDKN3-202ENST00000335183 ATF3P18847 181 aa37.09■■■■□ 3.53
CDKN3-202ENST00000335183 SETBP1Q9Y6X0 1596 aa37.05■■■■□ 3.52
CDKN3-202ENST00000335183 CLTCL1P53675 1640 aa37.03■■■■□ 3.52
CDKN3-202ENST00000335183 XRN1Q8IZH2 1706 aaKnown RBP37.03■■■■□ 3.52
CDKN3-202ENST00000335183 RRBP1Q9P2E9 1410 aaKnown RBP37.02■■■■□ 3.52
CDKN3-202ENST00000335183 KIF1BO60333 1816 aa37.01■■■■□ 3.52
CDKN3-202ENST00000335183 AHDC1Q5TGY3 1603 aaPredicted RBP37■■■■□ 3.51
CDKN3-202ENST00000335183 NAIPQ13075 1403 aa36.96■■■■□ 3.51
CDKN3-202ENST00000335183 NEXMIFQ5QGS0 1516 aa36.95■■■■□ 3.51
CDKN3-202ENST00000335183 SHPRHQ149N8 1683 aa36.94■■■■□ 3.5
CDKN3-202ENST00000335183 METP08581 1390 aa36.93■■■■□ 3.5
CDKN3-202ENST00000335183 LRP6O75581 1613 aa36.92■■■■□ 3.5
CDKN3-202ENST00000335183 SPATA31A6Q5VVP1 1343 aa36.92■■■■□ 3.5
CDKN3-202ENST00000335183 DCCP43146 1447 aa36.92■■■■□ 3.5
CDKN3-202ENST00000335183 BRINP3Q76B58 766 aa36.91■■■■□ 3.5
CDKN3-202ENST00000335183 SETD1AO15047 1707 aaKnown RBP36.9■■■■□ 3.5
CDKN3-202ENST00000335183 MEX3CQ5U5Q3 659 aaKnown RBP36.9■■■■□ 3.5
CDKN3-202ENST00000335183 TRIM52Q96A61 297 aa36.87■■■■□ 3.49
CDKN3-202ENST00000335183 ASXL1Q8IXJ9 1541 aa36.85■■■■□ 3.49
CDKN3-202ENST00000335183 MST1RQ04912 1400 aa36.85■■■■□ 3.49
CDKN3-202ENST00000335183 NALCNQ8IZF0 1738 aa36.83■■■■□ 3.49
CDKN3-202ENST00000335183 NHSL1Q5SYE7 1610 aa36.81■■■■□ 3.48
CDKN3-202ENST00000335183 ADGRL3Q9HAR2 1447 aa36.8■■■■□ 3.48
CDKN3-202ENST00000335183 HFM1A2PYH4 1435 aa36.79■■■■□ 3.48
CDKN3-202ENST00000335183 NUTM2BA6NNL0 878 aaPredicted RBP36.76■■■■□ 3.48
CDKN3-202ENST00000335183 NUTM2EB1AL46 878 aaPredicted RBP36.76■■■■□ 3.48
CDKN3-202ENST00000335183 NUTM2AQ8IVF1 878 aaPredicted RBP36.76■■■■□ 3.48
CDKN3-202ENST00000335183 ZNF772Q68DY9 489 aaPredicted RBP36.75■■■■□ 3.47
CDKN3-202ENST00000335183 SLC4A1APQ9BWU0 796 aaKnown RBP36.74■■■■□ 3.47
CDKN3-202ENST00000335183 VGFO15240 615 aaPredicted RBP36.73■■■■□ 3.47
CDKN3-202ENST00000335183 PPLO60437 1756 aa36.71■■■■□ 3.47
CDKN3-202ENST00000335183 SETD5Q9C0A6 1442 aa36.71■■■■□ 3.47
CDKN3-202ENST00000335183 DDX17Q92841 729 aaKnown RBP36.68■■■■□ 3.46
CDKN3-202ENST00000335183 PTCH1Q13635 1447 aa36.67■■■■□ 3.46
CDKN3-202ENST00000335183 LRRC59Q96AG4 307 aaKnown RBP36.66■■■■□ 3.46
CDKN3-202ENST00000335183 RPGRIP1LQ68CZ1 1315 aa36.65■■■■□ 3.46
CDKN3-202ENST00000335183 ROBO2Q9HCK4 1378 aa36.63■■■■□ 3.45
CDKN3-202ENST00000335183 C1orf167Q5SNV9 1468 aa36.62■■■■□ 3.45
CDKN3-202ENST00000335183 FOXD1Q16676 465 aa36.6■■■■□ 3.45
CDKN3-202ENST00000335183 AFF2P51816 1311 aa36.59■■■■□ 3.45
CDKN3-202ENST00000335183 PNPLA6Q8IY17 1366 aa36.58■■■■□ 3.45
CDKN3-202ENST00000335183 RXRBP28702 533 aa36.58■■■■□ 3.45
CDKN3-202ENST00000335183 PRAG1Q86YV5 1406 aa36.53■■■■□ 3.44
CDKN3-202ENST00000335183 C8orf37Q96NL8 207 aa36.53■■■■□ 3.44
CDKN3-202ENST00000335183 LAMC1P11047 1609 aa36.52■■■■□ 3.44
CDKN3-202ENST00000335183 ORAI2Q96SN7 254 aa36.52■■■■□ 3.44
CDKN3-202ENST00000335183 CCDC144AA2RUR9 1427 aa36.51■■■■□ 3.43
CDKN3-202ENST00000335183 IFT172Q9UG01 1749 aa36.46■■■■□ 3.43
CDKN3-202ENST00000335183 RGL3Q3MIN7 710 aa36.46■■■■□ 3.43
CDKN3-202ENST00000335183 UPF1Q92900 1129 aaKnown RBP eCLIP36.46■■■■□ 3.43
CDKN3-202ENST00000335183 CDK12Q9NYV4 1490 aaPredicted RBP36.45■■■■□ 3.43
CDKN3-202ENST00000335183 ADGRF5Q8IZF2 1346 aa36.45■■■■□ 3.43
CDKN3-202ENST00000335183 SOS2Q07890 1332 aaPredicted RBP36.43■■■■□ 3.42
CDKN3-202ENST00000335183 ADAMTS2O95450 1211 aa36.43■■■■□ 3.42
CDKN3-202ENST00000335183 MPHOSPH9Q99550 1183 aa36.42■■■■□ 3.42
CDKN3-202ENST00000335183 CDC42BPGQ6DT37 1551 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms