RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 SLAIN2Q9P270 581 aa31.36■■■□□ 2.61
FMR1-202ENST00000334557 NKTRP30414 1462 aaKnown RBP31.34■■■□□ 2.61
FMR1-202ENST00000334557 MSH6P52701 1360 aa31.32■■■□□ 2.6
FMR1-202ENST00000334557 ZFYVE9O95405 1425 aa31.31■■■□□ 2.6
FMR1-202ENST00000334557 ADGRL2O95490 1459 aa31.29■■■□□ 2.6
FMR1-202ENST00000334557 MYO5BQ9ULV0 1848 aa31.27■■■□□ 2.6
FMR1-202ENST00000334557 FAM50AQ14320 339 aaKnown RBP31.27■■■□□ 2.6
FMR1-202ENST00000334557 PLEKHG1Q9ULL1 1385 aa31.27■■■□□ 2.6
FMR1-202ENST00000334557 RIMS2Q9UQ26 1411 aa31.26■■■□□ 2.6
FMR1-202ENST00000334557 ANKRD50Q9ULJ7 1429 aa31.25■■■□□ 2.59
FMR1-202ENST00000334557 PHLPP1O60346 1717 aa31.25■■■□□ 2.59
FMR1-202ENST00000334557 CHD2O14647 1828 aaKnown RBP31.24■■■□□ 2.59
FMR1-202ENST00000334557 RPRD2Q5VT52 1461 aaKnown RBP31.24■■■□□ 2.59
FMR1-202ENST00000334557 PPP1R15AO75807 674 aaPredicted RBP31.23■■■□□ 2.59
FMR1-202ENST00000334557 NUTM2DQ5VT03 806 aaPredicted RBP31.23■■■□□ 2.59
FMR1-202ENST00000334557 JCADQ9P266 1359 aa31.22■■■□□ 2.59
FMR1-202ENST00000334557 TMEM131LA2VDJ0 1609 aa31.21■■■□□ 2.59
FMR1-202ENST00000334557 TBX22Q9Y458 520 aa31.21■■■□□ 2.59
FMR1-202ENST00000334557 GCC2Q8IWJ2 1684 aa31.21■■■□□ 2.59
FMR1-202ENST00000334557 CHGAP10645 457 aaKnown RBP31.19■■■□□ 2.58
FMR1-202ENST00000334557 SETD1AO15047 1707 aaKnown RBP31.18■■■□□ 2.58
FMR1-202ENST00000334557 HDGFP51858 240 aaKnown RBP31.17■■■□□ 2.58
FMR1-202ENST00000334557 COL16A1Q07092 1604 aaPredicted RBP31.16■■■□□ 2.58
FMR1-202ENST00000334557 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
FMR1-202ENST00000334557 C14orf37Q86TY3 774 aa31.14■■■□□ 2.58
FMR1-202ENST00000334557 LRP6O75581 1613 aa31.13■■■□□ 2.57
FMR1-202ENST00000334557 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.1■■■□□ 2.57
FMR1-202ENST00000334557 NCOA3Q9Y6Q9 1424 aa31.09■■■□□ 2.57
FMR1-202ENST00000334557 C19orf44Q9H6X5 657 aa31.08■■■□□ 2.57
FMR1-202ENST00000334557 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.07■■■□□ 2.56
FMR1-202ENST00000334557 E9PCH4 1651 aa31.07■■■□□ 2.56
FMR1-202ENST00000334557 UNC13BO14795 1591 aa31.06■■■□□ 2.56
FMR1-202ENST00000334557 SPATA31A6Q5VVP1 1343 aa31.05■■■□□ 2.56
FMR1-202ENST00000334557 CADPS2Q86UW7 1296 aa31.05■■■□□ 2.56
FMR1-202ENST00000334557 ATF3P18847 181 aa31.04■■■□□ 2.56
FMR1-202ENST00000334557 PTPRUQ92729 1446 aa31.04■■■□□ 2.56
FMR1-202ENST00000334557 MEX3CQ5U5Q3 659 aaKnown RBP31.03■■■□□ 2.56
FMR1-202ENST00000334557 AMOTL2Q9Y2J4 779 aa31.03■■■□□ 2.56
FMR1-202ENST00000334557 TRIM52Q96A61 297 aa31.01■■■□□ 2.55
FMR1-202ENST00000334557 AHDC1Q5TGY3 1603 aaPredicted RBP31■■■□□ 2.55
FMR1-202ENST00000334557 BRINP3Q76B58 766 aa31■■■□□ 2.55
FMR1-202ENST00000334557 PIK3R4Q99570 1358 aa31■■■□□ 2.55
FMR1-202ENST00000334557 DIP2AQ14689 1571 aa30.98■■■□□ 2.55
FMR1-202ENST00000334557 ZNF772Q68DY9 489 aaPredicted RBP30.98■■■□□ 2.55
FMR1-202ENST00000334557 UPF1Q92900 1129 aaKnown RBP eCLIP30.98■■■□□ 2.55
FMR1-202ENST00000334557 NUTM2BA6NNL0 878 aaPredicted RBP30.95■■■□□ 2.55
FMR1-202ENST00000334557 NUTM2EB1AL46 878 aaPredicted RBP30.95■■■□□ 2.55
FMR1-202ENST00000334557 NUTM2AQ8IVF1 878 aaPredicted RBP30.95■■■□□ 2.55
FMR1-202ENST00000334557 SHPRHQ149N8 1683 aa30.94■■■□□ 2.54
FMR1-202ENST00000334557 IQGAP3Q86VI3 1631 aa30.94■■■□□ 2.54
FMR1-202ENST00000334557 NUP155O75694 1391 aa30.93■■■□□ 2.54
FMR1-202ENST00000334557 TRPM2O94759 1503 aa30.93■■■□□ 2.54
FMR1-202ENST00000334557 ROCK1Q13464 1354 aa30.92■■■□□ 2.54
FMR1-202ENST00000334557 RXRBP28702 533 aa30.88■■■□□ 2.53
FMR1-202ENST00000334557 ITGAEP38570 1179 aa30.88■■■□□ 2.53
FMR1-202ENST00000334557 NRXN3Q9Y4C0 1643 aa30.87■■■□□ 2.53
FMR1-202ENST00000334557 METP08581 1390 aa30.85■■■□□ 2.53
FMR1-202ENST00000334557 DDX17Q92841 729 aaKnown RBP30.85■■■□□ 2.53
FMR1-202ENST00000334557 ASXL1Q8IXJ9 1541 aa30.84■■■□□ 2.53
FMR1-202ENST00000334557 MST1RQ04912 1400 aa30.84■■■□□ 2.53
FMR1-202ENST00000334557 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
FMR1-202ENST00000334557 AFF2P51816 1311 aa30.83■■■□□ 2.53
FMR1-202ENST00000334557 DCCP43146 1447 aa30.82■■■□□ 2.52
FMR1-202ENST00000334557 SETD5Q9C0A6 1442 aa30.81■■■□□ 2.52
FMR1-202ENST00000334557 SETBP1Q9Y6X0 1596 aa30.8■■■□□ 2.52
FMR1-202ENST00000334557 ZNF326Q5BKZ1 582 aaKnown RBP30.8■■■□□ 2.52
FMR1-202ENST00000334557 PPARGC1BQ86YN6 1023 aaKnown RBP30.76■■■□□ 2.51
FMR1-202ENST00000334557 LRRC59Q96AG4 307 aaKnown RBP30.76■■■□□ 2.51
FMR1-202ENST00000334557 NHSL1Q5SYE7 1610 aa30.76■■■□□ 2.51
FMR1-202ENST00000334557 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
FMR1-202ENST00000334557 C8orf37Q96NL8 207 aa30.73■■■□□ 2.51
FMR1-202ENST00000334557 SPHKAPQ2M3C7 1700 aa30.73■■■□□ 2.51
FMR1-202ENST00000334557 PNPLA6Q8IY17 1366 aa30.71■■■□□ 2.51
FMR1-202ENST00000334557 QTRT2Q9H974 415 aaKnown RBP30.71■■■□□ 2.51
FMR1-202ENST00000334557 ADGRL3Q9HAR2 1447 aa30.71■■■□□ 2.51
FMR1-202ENST00000334557 NALCNQ8IZF0 1738 aa30.67■■■□□ 2.5
FMR1-202ENST00000334557 RGS12O14924 1447 aa30.66■■■□□ 2.5
FMR1-202ENST00000334557 NEXMIFQ5QGS0 1516 aa30.66■■■□□ 2.5
FMR1-202ENST00000334557 CLTCL1P53675 1640 aa30.65■■■□□ 2.5
FMR1-202ENST00000334557 ADAMTS2O95450 1211 aa30.64■■■□□ 2.5
FMR1-202ENST00000334557 RBM6P78332 1123 aaKnown RBP30.64■■■□□ 2.5
FMR1-202ENST00000334557 C1orf167Q5SNV9 1468 aa30.63■■■□□ 2.49
FMR1-202ENST00000334557 ORAI2Q96SN7 254 aa30.62■■■□□ 2.49
FMR1-202ENST00000334557 NGLY1Q96IV0 654 aa30.6■■■□□ 2.49
FMR1-202ENST00000334557 ROBO2Q9HCK4 1378 aa30.57■■■□□ 2.48
FMR1-202ENST00000334557 SOS2Q07890 1332 aaPredicted RBP30.55■■■□□ 2.48
FMR1-202ENST00000334557 SRCAPQ6ZRS2 3230 aa30.52■■■□□ 2.48
FMR1-202ENST00000334557 LAMC1P11047 1609 aa30.51■■■□□ 2.48
FMR1-202ENST00000334557 USP21Q9UK80 565 aa30.5■■■□□ 2.47
FMR1-202ENST00000334557 PTCH1Q13635 1447 aa30.49■■■□□ 2.47
FMR1-202ENST00000334557 VGFO15240 615 aaPredicted RBP30.49■■■□□ 2.47
FMR1-202ENST00000334557 KIF1BO60333 1816 aa30.49■■■□□ 2.47
FMR1-202ENST00000334557 NAIPQ13075 1403 aa30.47■■■□□ 2.47
FMR1-202ENST00000334557 FNBP4Q8N3X1 1017 aaPredicted RBP30.45■■■□□ 2.47
FMR1-202ENST00000334557 TRPC5Q9UL62 973 aaPredicted RBP30.43■■■□□ 2.46
FMR1-202ENST00000334557 ATAD2Q6PL18 1390 aa30.4■■■□□ 2.46
FMR1-202ENST00000334557 PRAG1Q86YV5 1406 aa30.39■■■□□ 2.46
FMR1-202ENST00000334557 ATRNO75882 1429 aa30.39■■■□□ 2.45
FMR1-202ENST00000334557 XPCQ01831 940 aaPredicted RBP30.38■■■□□ 2.45
FMR1-202ENST00000334557 ESCO1Q5FWF5 840 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms