RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
LINC00313-201ENST00000332440 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
LINC00313-201ENST00000332440 MED1Q15648 1581 aaPredicted RBP25■■□□□ 1.59
LINC00313-201ENST00000332440 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
LINC00313-201ENST00000332440 NUP155O75694 1391 aa24.99■■□□□ 1.59
LINC00313-201ENST00000332440 SPHKAPQ2M3C7 1700 aa24.98■■□□□ 1.59
LINC00313-201ENST00000332440 NAIPQ13075 1403 aa24.96■■□□□ 1.59
LINC00313-201ENST00000332440 KCNA6P17658 529 aa24.96■■□□□ 1.59
LINC00313-201ENST00000332440 ITGAEP38570 1179 aa24.96■■□□□ 1.59
LINC00313-201ENST00000332440 SLC26A8Q96RN1 970 aa24.96■■□□□ 1.59
LINC00313-201ENST00000332440 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
LINC00313-201ENST00000332440 TMEM94Q12767 1356 aa24.95■■□□□ 1.59
LINC00313-201ENST00000332440 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
LINC00313-201ENST00000332440 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
LINC00313-201ENST00000332440 DIP2AQ14689 1571 aa24.92■■□□□ 1.58
LINC00313-201ENST00000332440 CLTCL1P53675 1640 aa24.89■■□□□ 1.57
LINC00313-201ENST00000332440 TRPM2O94759 1503 aa24.88■■□□□ 1.57
LINC00313-201ENST00000332440 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
LINC00313-201ENST00000332440 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
LINC00313-201ENST00000332440 ROBO1Q9Y6N7 1651 aa24.85■■□□□ 1.57
LINC00313-201ENST00000332440 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
LINC00313-201ENST00000332440 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
LINC00313-201ENST00000332440 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
LINC00313-201ENST00000332440 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
LINC00313-201ENST00000332440 XRN1Q8IZH2 1706 aaKnown RBP24.81■■□□□ 1.56
LINC00313-201ENST00000332440 SOCS7O14512 581 aa24.81■■□□□ 1.56
LINC00313-201ENST00000332440 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
LINC00313-201ENST00000332440 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.8■■□□□ 1.56
LINC00313-201ENST00000332440 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
LINC00313-201ENST00000332440 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
LINC00313-201ENST00000332440 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
LINC00313-201ENST00000332440 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
LINC00313-201ENST00000332440 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
LINC00313-201ENST00000332440 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
LINC00313-201ENST00000332440 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
LINC00313-201ENST00000332440 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
LINC00313-201ENST00000332440 SETD1AO15047 1707 aaKnown RBP24.74■■□□□ 1.55
LINC00313-201ENST00000332440 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
LINC00313-201ENST00000332440 KIF1BO60333 1816 aa24.72■■□□□ 1.55
LINC00313-201ENST00000332440 MSH6P52701 1360 aa24.72■■□□□ 1.55
LINC00313-201ENST00000332440 BCANQ96GW7 911 aa24.72■■□□□ 1.55
LINC00313-201ENST00000332440 COL16A1Q07092 1604 aaPredicted RBP24.69■■□□□ 1.54
LINC00313-201ENST00000332440 METP08581 1390 aa24.67■■□□□ 1.54
LINC00313-201ENST00000332440 PHLPP1O60346 1717 aa24.66■■□□□ 1.54
LINC00313-201ENST00000332440 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
LINC00313-201ENST00000332440 PPLO60437 1756 aa24.64■■□□□ 1.53
LINC00313-201ENST00000332440 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
LINC00313-201ENST00000332440 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
LINC00313-201ENST00000332440 AMOTL2Q9Y2J4 779 aa24.63■■□□□ 1.53
LINC00313-201ENST00000332440 DCCP43146 1447 aa24.61■■□□□ 1.53
LINC00313-201ENST00000332440 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
LINC00313-201ENST00000332440 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
LINC00313-201ENST00000332440 ZNF326Q5BKZ1 582 aaKnown RBP24.57■■□□□ 1.52
LINC00313-201ENST00000332440 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
LINC00313-201ENST00000332440 IFT172Q9UG01 1749 aa24.57■■□□□ 1.52
LINC00313-201ENST00000332440 MST1RQ04912 1400 aa24.55■■□□□ 1.52
LINC00313-201ENST00000332440 SLC4A1APQ9BWU0 796 aaKnown RBP24.55■■□□□ 1.52
LINC00313-201ENST00000332440 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
LINC00313-201ENST00000332440 ADGRL3Q9HAR2 1447 aa24.54■■□□□ 1.52
LINC00313-201ENST00000332440 TRIM52Q96A61 297 aa24.54■■□□□ 1.52
LINC00313-201ENST00000332440 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
LINC00313-201ENST00000332440 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
LINC00313-201ENST00000332440 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
LINC00313-201ENST00000332440 CADPS2Q86UW7 1296 aa24.53■■□□□ 1.52
LINC00313-201ENST00000332440 ASXL1Q8IXJ9 1541 aa24.52■■□□□ 1.52
LINC00313-201ENST00000332440 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
LINC00313-201ENST00000332440 LRP6O75581 1613 aa24.51■■□□□ 1.51
LINC00313-201ENST00000332440 FOXD1Q16676 465 aa24.51■■□□□ 1.51
LINC00313-201ENST00000332440 JCADQ9P266 1359 aa24.51■■□□□ 1.51
LINC00313-201ENST00000332440 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
LINC00313-201ENST00000332440 BRINP3Q76B58 766 aa24.48■■□□□ 1.51
LINC00313-201ENST00000332440 LAMC1P11047 1609 aa24.47■■□□□ 1.51
LINC00313-201ENST00000332440 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
LINC00313-201ENST00000332440 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
LINC00313-201ENST00000332440 ATF3P18847 181 aa24.46■■□□□ 1.51
LINC00313-201ENST00000332440 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
LINC00313-201ENST00000332440 MPHOSPH9Q99550 1183 aa24.44■■□□□ 1.5
LINC00313-201ENST00000332440 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
LINC00313-201ENST00000332440 POTEAQ6S8J7 498 aa24.42■■□□□ 1.5
LINC00313-201ENST00000332440 SETD5Q9C0A6 1442 aa24.41■■□□□ 1.5
LINC00313-201ENST00000332440 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.5
LINC00313-201ENST00000332440 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.5
LINC00313-201ENST00000332440 TECPR2O15040 1411 aa24.39■■□□□ 1.5
LINC00313-201ENST00000332440 PIK3C2GO75747 1445 aa24.39■■□□□ 1.5
LINC00313-201ENST00000332440 C1orf167Q5SNV9 1468 aa24.38■■□□□ 1.49
LINC00313-201ENST00000332440 SPATA31A6Q5VVP1 1343 aa24.37■■□□□ 1.49
LINC00313-201ENST00000332440 NRXN1Q9ULB1 1477 aa24.37■■□□□ 1.49
LINC00313-201ENST00000332440 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
LINC00313-201ENST00000332440 ANKRD30BQ9BXX2 1392 aa24.34■■□□□ 1.49
LINC00313-201ENST00000332440 RAB3GAP2Q9H2M9 1393 aa24.34■■□□□ 1.49
LINC00313-201ENST00000332440 MYOM2P54296 1465 aa24.31■■□□□ 1.48
LINC00313-201ENST00000332440 DDX17Q92841 729 aaKnown RBP24.29■■□□□ 1.48
LINC00313-201ENST00000332440 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
LINC00313-201ENST00000332440 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
LINC00313-201ENST00000332440 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
LINC00313-201ENST00000332440 ACIN1Q9UKV3 1341 aaKnown RBP24.27■■□□□ 1.48
LINC00313-201ENST00000332440 ABCC11Q96J66 1382 aa24.26■■□□□ 1.47
LINC00313-201ENST00000332440 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
LINC00313-201ENST00000332440 COL22A1Q8NFW1 1626 aaPredicted RBP24.24■■□□□ 1.47
LINC00313-201ENST00000332440 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms