RNA–Protein interactions for RNA: ENST00000330636.8

LYRM4-201, Transcript of LYR motif containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LYRM4, Length 7,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-201ENST00000330636 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
LYRM4-201ENST00000330636 SSR1P43307 286 aaKnown RBP10.59□□□□□ -0.71
LYRM4-201ENST00000330636 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
LYRM4-201ENST00000330636 TOMM22Q9NS69 142 aa10.58□□□□□ -0.72
LYRM4-201ENST00000330636 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
LYRM4-201ENST00000330636 RBM33Q96EV2 1170 aaKnown RBP10.58□□□□□ -0.72
LYRM4-201ENST00000330636 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
LYRM4-201ENST00000330636 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
LYRM4-201ENST00000330636 TRAK2O60296 914 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 POLR3GO15318 223 aaPredicted RBP10.57□□□□□ -0.72
LYRM4-201ENST00000330636 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.72
LYRM4-201ENST00000330636 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 FOSBP53539 338 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 CARD11Q9BXL7 1154 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 SEPT7Q16181 437 aaKnown RBP10.57□□□□□ -0.72
LYRM4-201ENST00000330636 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
LYRM4-201ENST00000330636 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 LRRCC1Q9C099 1032 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 MYO6Q9UM54 1294 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 MNAT1P51948 309 aa10.57□□□□□ -0.72
LYRM4-201ENST00000330636 TMCO5BA8MYB1 307 aa10.56□□□□□ -0.72
LYRM4-201ENST00000330636 RNF187Q5TA31 235 aaPredicted RBP10.56□□□□□ -0.72
LYRM4-201ENST00000330636 FAM177A1Q8N128 213 aaPredicted RBP10.56□□□□□ -0.72
LYRM4-201ENST00000330636 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
LYRM4-201ENST00000330636 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
LYRM4-201ENST00000330636 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
LYRM4-201ENST00000330636 TIGD1Q96MW7 591 aa10.56□□□□□ -0.72
LYRM4-201ENST00000330636 TRIM5Q9C035 493 aa10.56□□□□□ -0.72
LYRM4-201ENST00000330636 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
LYRM4-201ENST00000330636 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
LYRM4-201ENST00000330636 SMC2O95347 1197 aa10.55□□□□□ -0.72
LYRM4-201ENST00000330636 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
LYRM4-201ENST00000330636 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
LYRM4-201ENST00000330636 GBP2P32456 591 aaPredicted RBP10.55□□□□□ -0.72
LYRM4-201ENST00000330636 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
LYRM4-201ENST00000330636 SHTN1A0MZ66 631 aa10.54□□□□□ -0.72
LYRM4-201ENST00000330636 DNAAF4Q8WXU2 420 aa10.54□□□□□ -0.72
LYRM4-201ENST00000330636 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
LYRM4-201ENST00000330636 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
LYRM4-201ENST00000330636 SARNPP82979 210 aaKnown RBP10.54□□□□□ -0.72
LYRM4-201ENST00000330636 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
LYRM4-201ENST00000330636 FRAT2O75474 233 aaPredicted RBP10.53□□□□□ -0.72
LYRM4-201ENST00000330636 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
LYRM4-201ENST00000330636 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
LYRM4-201ENST00000330636 MPHOSPH10O00566 681 aaKnown RBP10.53□□□□□ -0.72
LYRM4-201ENST00000330636 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
LYRM4-201ENST00000330636 PAIP2Q9BPZ3 127 aaKnown RBP10.53□□□□□ -0.72
LYRM4-201ENST00000330636 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
LYRM4-201ENST00000330636 MICALCLQ6ZW33 695 aa10.52□□□□□ -0.73
LYRM4-201ENST00000330636 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
LYRM4-201ENST00000330636 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
LYRM4-201ENST00000330636 SPATA24Q86W54 205 aa10.52□□□□□ -0.73
LYRM4-201ENST00000330636 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
LYRM4-201ENST00000330636 PLIN1O60240 522 aa10.51□□□□□ -0.73
LYRM4-201ENST00000330636 ERLIN2O94905 339 aa10.51□□□□□ -0.73
LYRM4-201ENST00000330636 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
LYRM4-201ENST00000330636 ERLIN1O75477 346 aa10.51□□□□□ -0.73
LYRM4-201ENST00000330636 CENPQQ7L2Z9 268 aaPredicted RBP10.51□□□□□ -0.73
LYRM4-201ENST00000330636 GRPEL1Q9HAV7 217 aa10.51□□□□□ -0.73
LYRM4-201ENST00000330636 VPS37CA5D8V6 355 aaPredicted RBP10.5□□□□□ -0.73
LYRM4-201ENST00000330636 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
LYRM4-201ENST00000330636 STK31Q9BXU1 1019 aa10.5□□□□□ -0.73
LYRM4-201ENST00000330636 ESPNB1AK53 854 aa10.5□□□□□ -0.73
LYRM4-201ENST00000330636 CCP110O43303 1012 aa10.5□□□□□ -0.73
LYRM4-201ENST00000330636 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
LYRM4-201ENST00000330636 TMX4Q9H1E5 349 aaPredicted RBP10.5□□□□□ -0.73
LYRM4-201ENST00000330636 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 SMC4Q9NTJ3 1288 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
LYRM4-201ENST00000330636 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
LYRM4-201ENST00000330636 ANKRD45Q5TZF3 282 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 CCDC160A6NGH7 325 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 NAT10Q9H0A0 1025 aaKnown RBP10.49□□□□□ -0.73
LYRM4-201ENST00000330636 DZIP1Q86YF9 867 aaKnown RBP10.49□□□□□ -0.73
LYRM4-201ENST00000330636 EXOC6Q8TAG9 804 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 SLC26A8Q96RN1 970 aa10.49□□□□□ -0.73
LYRM4-201ENST00000330636 SEPT6Q14141 434 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 DAAM2Q86T65 1068 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 PAF1Q8N7H5 531 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 MROH2BQ7Z745 1585 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 CRBNQ96SW2 442 aa10.48□□□□□ -0.73
LYRM4-201ENST00000330636 EPS15P42566 896 aa10.47□□□□□ -0.73
LYRM4-201ENST00000330636 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
LYRM4-201ENST00000330636 CCDC47Q96A33 483 aaKnown RBP10.47□□□□□ -0.73
LYRM4-201ENST00000330636 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
LYRM4-201ENST00000330636 NUCB2P80303 420 aa10.47□□□□□ -0.73
LYRM4-201ENST00000330636 FMNL2Q96PY5 1086 aa10.47□□□□□ -0.73
LYRM4-201ENST00000330636 SEPT11Q9NVA2 429 aaKnown RBP10.47□□□□□ -0.73
LYRM4-201ENST00000330636 AKAP17AQ02040 695 aaKnown RBP10.46□□□□□ -0.73
LYRM4-201ENST00000330636 RNF20Q5VTR2 975 aa10.46□□□□□ -0.73
LYRM4-201ENST00000330636 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.73
LYRM4-201ENST00000330636 ANO2Q9NQ90 1003 aa10.46□□□□□ -0.73
LYRM4-201ENST00000330636 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.73
LYRM4-201ENST00000330636 LRRFIP2Q9Y608 721 aaKnown RBP10.46□□□□□ -0.73
LYRM4-201ENST00000330636 OFD1O75665 1012 aa10.46□□□□□ -0.74
LYRM4-201ENST00000330636 SERPINA10Q9UK55 444 aa10.46□□□□□ -0.74
LYRM4-201ENST00000330636 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms