RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 NUP155O75694 1391 aa22.39■■□□□ 1.18
TSPO-201ENST00000329563 ZFYVE9O95405 1425 aa22.39■■□□□ 1.17
TSPO-201ENST00000329563 MED1Q15648 1581 aaPredicted RBP22.38■■□□□ 1.17
TSPO-201ENST00000329563 NAIPQ13075 1403 aa22.35■■□□□ 1.17
TSPO-201ENST00000329563 SLC26A8Q96RN1 970 aa22.33■■□□□ 1.17
TSPO-201ENST00000329563 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
TSPO-201ENST00000329563 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
TSPO-201ENST00000329563 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
TSPO-201ENST00000329563 SPHKAPQ2M3C7 1700 aa22.3■■□□□ 1.16
TSPO-201ENST00000329563 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
TSPO-201ENST00000329563 KCNA6P17658 529 aa22.28■■□□□ 1.16
TSPO-201ENST00000329563 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
TSPO-201ENST00000329563 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
TSPO-201ENST00000329563 BCANQ96GW7 911 aa22.27■■□□□ 1.16
TSPO-201ENST00000329563 NKTRP30414 1462 aaKnown RBP22.27■■□□□ 1.16
TSPO-201ENST00000329563 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
TSPO-201ENST00000329563 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
TSPO-201ENST00000329563 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
TSPO-201ENST00000329563 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
TSPO-201ENST00000329563 TMEM94Q12767 1356 aa22.24■■□□□ 1.15
TSPO-201ENST00000329563 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
TSPO-201ENST00000329563 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
TSPO-201ENST00000329563 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
TSPO-201ENST00000329563 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
TSPO-201ENST00000329563 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
TSPO-201ENST00000329563 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
TSPO-201ENST00000329563 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
TSPO-201ENST00000329563 TRPM2O94759 1503 aa22.2■■□□□ 1.14
TSPO-201ENST00000329563 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
TSPO-201ENST00000329563 MSH6P52701 1360 aa22.18■■□□□ 1.14
TSPO-201ENST00000329563 TBX22Q9Y458 520 aa22.16■■□□□ 1.14
TSPO-201ENST00000329563 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
TSPO-201ENST00000329563 ROBO1Q9Y6N7 1651 aa22.15■■□□□ 1.14
TSPO-201ENST00000329563 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
TSPO-201ENST00000329563 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
TSPO-201ENST00000329563 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
TSPO-201ENST00000329563 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
TSPO-201ENST00000329563 NCOA3Q9Y6Q9 1424 aa22.1■■□□□ 1.13
TSPO-201ENST00000329563 KIF1BO60333 1816 aa22.1■■□□□ 1.13
TSPO-201ENST00000329563 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
TSPO-201ENST00000329563 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
TSPO-201ENST00000329563 ZNF326Q5BKZ1 582 aaKnown RBP22.06■■□□□ 1.12
TSPO-201ENST00000329563 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
TSPO-201ENST00000329563 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
TSPO-201ENST00000329563 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
TSPO-201ENST00000329563 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
TSPO-201ENST00000329563 FOXD1Q16676 465 aa22.04■■□□□ 1.12
TSPO-201ENST00000329563 METP08581 1390 aa22.03■■□□□ 1.12
TSPO-201ENST00000329563 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
TSPO-201ENST00000329563 AMOTL2Q9Y2J4 779 aa22.02■■□□□ 1.12
TSPO-201ENST00000329563 SETD1AO15047 1707 aaKnown RBP22.01■■□□□ 1.11
TSPO-201ENST00000329563 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
TSPO-201ENST00000329563 PPLO60437 1756 aa21.99■■□□□ 1.11
TSPO-201ENST00000329563 ATF3P18847 181 aa21.98■■□□□ 1.11
TSPO-201ENST00000329563 C19orf44Q9H6X5 657 aa21.98■■□□□ 1.11
TSPO-201ENST00000329563 JCADQ9P266 1359 aa21.98■■□□□ 1.11
TSPO-201ENST00000329563 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
TSPO-201ENST00000329563 DCCP43146 1447 aa21.93■■□□□ 1.1
TSPO-201ENST00000329563 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
TSPO-201ENST00000329563 TRIM26Q12899 539 aaPredicted RBP21.93■■□□□ 1.1
TSPO-201ENST00000329563 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
TSPO-201ENST00000329563 RGS17Q9UGC6 210 aaPredicted RBP21.92■■□□□ 1.1
TSPO-201ENST00000329563 NALCNQ8IZF0 1738 aa21.92■■□□□ 1.1
TSPO-201ENST00000329563 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
TSPO-201ENST00000329563 SPATA31E1Q6ZUB1 1445 aa21.91■■□□□ 1.1
TSPO-201ENST00000329563 IFT172Q9UG01 1749 aa21.91■■□□□ 1.1
TSPO-201ENST00000329563 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.1
TSPO-201ENST00000329563 RPGRIP1LQ68CZ1 1315 aa21.89■■□□□ 1.1
TSPO-201ENST00000329563 VGFO15240 615 aaPredicted RBP21.89■■□□□ 1.09
TSPO-201ENST00000329563 SPATA31A6Q5VVP1 1343 aa21.88■■□□□ 1.09
TSPO-201ENST00000329563 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
TSPO-201ENST00000329563 SHPRHQ149N8 1683 aa21.87■■□□□ 1.09
TSPO-201ENST00000329563 MST1RQ04912 1400 aa21.86■■□□□ 1.09
TSPO-201ENST00000329563 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
TSPO-201ENST00000329563 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
TSPO-201ENST00000329563 ADGRL3Q9HAR2 1447 aa21.85■■□□□ 1.09
TSPO-201ENST00000329563 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
TSPO-201ENST00000329563 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
TSPO-201ENST00000329563 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
TSPO-201ENST00000329563 MEX3CQ5U5Q3 659 aaKnown RBP21.83■■□□□ 1.09
TSPO-201ENST00000329563 BRINP3Q76B58 766 aa21.83■■□□□ 1.09
TSPO-201ENST00000329563 POTEAQ6S8J7 498 aa21.82■■□□□ 1.08
TSPO-201ENST00000329563 ASXL1Q8IXJ9 1541 aa21.81■■□□□ 1.08
TSPO-201ENST00000329563 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
TSPO-201ENST00000329563 ZNF772Q68DY9 489 aaPredicted RBP21.78■■□□□ 1.08
TSPO-201ENST00000329563 LRP6O75581 1613 aa21.77■■□□□ 1.08
TSPO-201ENST00000329563 PIK3C2GO75747 1445 aa21.77■■□□□ 1.08
TSPO-201ENST00000329563 ANKRD30BQ9BXX2 1392 aa21.76■■□□□ 1.07
TSPO-201ENST00000329563 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
TSPO-201ENST00000329563 C1orf167Q5SNV9 1468 aa21.73■■□□□ 1.07
TSPO-201ENST00000329563 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
TSPO-201ENST00000329563 NRXN1Q9ULB1 1477 aa21.72■■□□□ 1.07
TSPO-201ENST00000329563 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
TSPO-201ENST00000329563 KNDC1Q76NI1 1749 aa21.72■■□□□ 1.07
TSPO-201ENST00000329563 TECPR2O15040 1411 aa21.72■■□□□ 1.07
TSPO-201ENST00000329563 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
TSPO-201ENST00000329563 LAMC1P11047 1609 aa21.7■■□□□ 1.06
TSPO-201ENST00000329563 MYOM2P54296 1465 aa21.7■■□□□ 1.06
TSPO-201ENST00000329563 LRPPRCP42704 1394 aaKnown RBP21.69■■□□□ 1.06
TSPO-201ENST00000329563 STK26Q9P289 416 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms