RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 MYO5BQ9ULV0 1848 aa35.69■■■■□ 3.3
TMEM54-201ENST00000329151 ITGAEP38570 1179 aa35.69■■■■□ 3.3
TMEM54-201ENST00000329151 ROCK1Q13464 1354 aa35.68■■■■□ 3.3
TMEM54-201ENST00000329151 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
TMEM54-201ENST00000329151 PROSER2Q86WR7 435 aaPredicted RBP35.68■■■■□ 3.3
TMEM54-201ENST00000329151 TMEM94Q12767 1356 aa35.65■■■■□ 3.3
TMEM54-201ENST00000329151 RIMS2Q9UQ26 1411 aa35.61■■■■□ 3.29
TMEM54-201ENST00000329151 NKTRP30414 1462 aaKnown RBP35.6■■■■□ 3.29
TMEM54-201ENST00000329151 E9PCH4 1651 aa35.59■■■■□ 3.29
TMEM54-201ENST00000329151 IQGAP3Q86VI3 1631 aa35.59■■■■□ 3.29
TMEM54-201ENST00000329151 TMEM131LA2VDJ0 1609 aa35.58■■■■□ 3.29
TMEM54-201ENST00000329151 PPARGC1BQ86YN6 1023 aaKnown RBP35.58■■■■□ 3.29
TMEM54-201ENST00000329151 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.58■■■■□ 3.29
TMEM54-201ENST00000329151 NUP155O75694 1391 aa35.57■■■■□ 3.28
TMEM54-201ENST00000329151 PLEKHG1Q9ULL1 1385 aa35.57■■■■□ 3.28
TMEM54-201ENST00000329151 NWD1Q149M9 1564 aa35.55■■■■□ 3.28
TMEM54-201ENST00000329151 ZFYVE9O95405 1425 aa35.55■■■■□ 3.28
TMEM54-201ENST00000329151 MSH6P52701 1360 aa35.54■■■■□ 3.28
TMEM54-201ENST00000329151 RBM33Q96EV2 1170 aaKnown RBP35.53■■■■□ 3.28
TMEM54-201ENST00000329151 FAM135BQ49AJ0 1406 aa35.52■■■■□ 3.28
TMEM54-201ENST00000329151 CHD2O14647 1828 aaKnown RBP35.5■■■■□ 3.27
TMEM54-201ENST00000329151 ROBO1Q9Y6N7 1651 aa35.46■■■■□ 3.27
TMEM54-201ENST00000329151 C14orf37Q86TY3 774 aa35.46■■■■□ 3.27
TMEM54-201ENST00000329151 NUTM2DQ5VT03 806 aaPredicted RBP35.44■■■■□ 3.26
TMEM54-201ENST00000329151 TBX22Q9Y458 520 aa35.44■■■■□ 3.26
TMEM54-201ENST00000329151 DIP2AQ14689 1571 aa35.4■■■■□ 3.26
TMEM54-201ENST00000329151 SLAIN2Q9P270 581 aa35.37■■■■□ 3.25
TMEM54-201ENST00000329151 SPHKAPQ2M3C7 1700 aa35.37■■■■□ 3.25
TMEM54-201ENST00000329151 ZNF326Q5BKZ1 582 aaKnown RBP35.34■■■■□ 3.25
TMEM54-201ENST00000329151 PIK3R4Q99570 1358 aa35.33■■■■□ 3.25
TMEM54-201ENST00000329151 PHLPP1O60346 1717 aa35.32■■■■□ 3.24
TMEM54-201ENST00000329151 TRPM2O94759 1503 aa35.32■■■■□ 3.24
TMEM54-201ENST00000329151 ADAMTS13Q76LX8 1427 aa35.31■■■■□ 3.24
TMEM54-201ENST00000329151 NCOA3Q9Y6Q9 1424 aa35.31■■■■□ 3.24
TMEM54-201ENST00000329151 ATF3P18847 181 aa35.27■■■■□ 3.24
TMEM54-201ENST00000329151 CADPS2Q86UW7 1296 aa35.25■■■■□ 3.23
TMEM54-201ENST00000329151 RRBP1Q9P2E9 1410 aaKnown RBP35.23■■■■□ 3.23
TMEM54-201ENST00000329151 C19orf44Q9H6X5 657 aa35.22■■■■□ 3.23
TMEM54-201ENST00000329151 AMOTL2Q9Y2J4 779 aa35.22■■■■□ 3.23
TMEM54-201ENST00000329151 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.2■■■■□ 3.23
TMEM54-201ENST00000329151 JCADQ9P266 1359 aa35.19■■■■□ 3.22
TMEM54-201ENST00000329151 KIF1BO60333 1816 aa35.18■■■■□ 3.22
TMEM54-201ENST00000329151 TRIM52Q96A61 297 aa35.17■■■■□ 3.22
TMEM54-201ENST00000329151 RGS17Q9UGC6 210 aaPredicted RBP35.15■■■■□ 3.22
TMEM54-201ENST00000329151 NAIPQ13075 1403 aa35.15■■■■□ 3.22
TMEM54-201ENST00000329151 SETBP1Q9Y6X0 1596 aa35.14■■■■□ 3.22
TMEM54-201ENST00000329151 CLTCL1P53675 1640 aa35.13■■■■□ 3.21
TMEM54-201ENST00000329151 PTPRUQ92729 1446 aa35.1■■■■□ 3.21
TMEM54-201ENST00000329151 NRXN3Q9Y4C0 1643 aa35.1■■■■□ 3.21
TMEM54-201ENST00000329151 COL16A1Q07092 1604 aaPredicted RBP35.09■■■■□ 3.21
TMEM54-201ENST00000329151 XRN1Q8IZH2 1706 aaKnown RBP35.07■■■■□ 3.2
TMEM54-201ENST00000329151 MEX3CQ5U5Q3 659 aaKnown RBP35.06■■■■□ 3.2
TMEM54-201ENST00000329151 DCCP43146 1447 aa35.05■■■■□ 3.2
TMEM54-201ENST00000329151 NEXMIFQ5QGS0 1516 aa35.04■■■■□ 3.2
TMEM54-201ENST00000329151 SLC4A1APQ9BWU0 796 aaKnown RBP35.03■■■■□ 3.2
TMEM54-201ENST00000329151 AHDC1Q5TGY3 1603 aaPredicted RBP35.03■■■■□ 3.2
TMEM54-201ENST00000329151 HFM1A2PYH4 1435 aa35.02■■■■□ 3.2
TMEM54-201ENST00000329151 POTEAQ6S8J7 498 aa35.02■■■■□ 3.2
TMEM54-201ENST00000329151 SPATA31A6Q5VVP1 1343 aa35.02■■■■□ 3.2
TMEM54-201ENST00000329151 METP08581 1390 aa35■■■■□ 3.19
TMEM54-201ENST00000329151 VGFO15240 615 aaPredicted RBP34.98■■■■□ 3.19
TMEM54-201ENST00000329151 BRINP3Q76B58 766 aa34.97■■■■□ 3.19
TMEM54-201ENST00000329151 SHPRHQ149N8 1683 aa34.96■■■■□ 3.19
TMEM54-201ENST00000329151 ASXL1Q8IXJ9 1541 aa34.91■■■■□ 3.18
TMEM54-201ENST00000329151 ADGRL3Q9HAR2 1447 aa34.91■■■■□ 3.18
TMEM54-201ENST00000329151 RPGRIP1LQ68CZ1 1315 aa34.9■■■■□ 3.18
TMEM54-201ENST00000329151 MST1RQ04912 1400 aa34.89■■■■□ 3.18
TMEM54-201ENST00000329151 ZNF772Q68DY9 489 aaPredicted RBP34.88■■■■□ 3.17
TMEM54-201ENST00000329151 NALCNQ8IZF0 1738 aa34.86■■■■□ 3.17
TMEM54-201ENST00000329151 LRP6O75581 1613 aa34.86■■■■□ 3.17
TMEM54-201ENST00000329151 NUTM2BA6NNL0 878 aaPredicted RBP34.86■■■■□ 3.17
TMEM54-201ENST00000329151 NUTM2EB1AL46 878 aaPredicted RBP34.86■■■■□ 3.17
TMEM54-201ENST00000329151 NUTM2AQ8IVF1 878 aaPredicted RBP34.86■■■■□ 3.17
TMEM54-201ENST00000329151 PPLO60437 1756 aa34.83■■■■□ 3.17
TMEM54-201ENST00000329151 NHSL1Q5SYE7 1610 aa34.83■■■■□ 3.17
TMEM54-201ENST00000329151 LRRC59Q96AG4 307 aaKnown RBP34.82■■■■□ 3.16
TMEM54-201ENST00000329151 PTCH1Q13635 1447 aa34.81■■■■□ 3.16
TMEM54-201ENST00000329151 CCDC144AA2RUR9 1427 aa34.79■■■■□ 3.16
TMEM54-201ENST00000329151 SETD1AO15047 1707 aaKnown RBP34.78■■■■□ 3.16
TMEM54-201ENST00000329151 SETD5Q9C0A6 1442 aa34.78■■■■□ 3.16
TMEM54-201ENST00000329151 FOXD1Q16676 465 aa34.77■■■■□ 3.16
TMEM54-201ENST00000329151 ROBO2Q9HCK4 1378 aa34.73■■■■□ 3.15
TMEM54-201ENST00000329151 C1orf167Q5SNV9 1468 aa34.71■■■■□ 3.15
TMEM54-201ENST00000329151 RGL3Q3MIN7 710 aa34.7■■■■□ 3.15
TMEM54-201ENST00000329151 DDX17Q92841 729 aaKnown RBP34.7■■■■□ 3.15
TMEM54-201ENST00000329151 RXRBP28702 533 aa34.68■■■■□ 3.14
TMEM54-201ENST00000329151 MPHOSPH9Q99550 1183 aa34.67■■■■□ 3.14
TMEM54-201ENST00000329151 ACIN1Q9UKV3 1341 aaKnown RBP34.66■■■■□ 3.14
TMEM54-201ENST00000329151 AFF2P51816 1311 aa34.65■■■■□ 3.14
TMEM54-201ENST00000329151 PRAG1Q86YV5 1406 aa34.64■■■■□ 3.14
TMEM54-201ENST00000329151 C8orf37Q96NL8 207 aa34.64■■■■□ 3.14
TMEM54-201ENST00000329151 PNPLA6Q8IY17 1366 aa34.63■■■■□ 3.13
TMEM54-201ENST00000329151 ANKRD30BQ9BXX2 1392 aa34.63■■■■□ 3.13
TMEM54-201ENST00000329151 ORAI2Q96SN7 254 aa34.61■■■■□ 3.13
TMEM54-201ENST00000329151 STK26Q9P289 416 aa34.6■■■■□ 3.13
TMEM54-201ENST00000329151 ADGRF5Q8IZF2 1346 aa34.59■■■■□ 3.13
TMEM54-201ENST00000329151 IFT172Q9UG01 1749 aa34.58■■■■□ 3.13
TMEM54-201ENST00000329151 LAMC1P11047 1609 aa34.56■■■■□ 3.12
TMEM54-201ENST00000329151 SPATA31E1Q6ZUB1 1445 aa34.55■■■■□ 3.12
TMEM54-201ENST00000329151 CDC42BPGQ6DT37 1551 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms