RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
RPAIN-201ENST00000327154 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
RPAIN-201ENST00000327154 RIMS2Q9UQ26 1411 aa21.47■■□□□ 1.03
RPAIN-201ENST00000327154 TMEM94Q12767 1356 aa21.47■■□□□ 1.03
RPAIN-201ENST00000327154 ZFYVE9O95405 1425 aa21.46■■□□□ 1.03
RPAIN-201ENST00000327154 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
RPAIN-201ENST00000327154 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
RPAIN-201ENST00000327154 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.45■■□□□ 1.02
RPAIN-201ENST00000327154 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
RPAIN-201ENST00000327154 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
RPAIN-201ENST00000327154 E9PCH4 1651 aa21.44■■□□□ 1.02
RPAIN-201ENST00000327154 SOCS7O14512 581 aa21.43■■□□□ 1.02
RPAIN-201ENST00000327154 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
RPAIN-201ENST00000327154 TMEM131LA2VDJ0 1609 aa21.43■■□□□ 1.02
RPAIN-201ENST00000327154 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
RPAIN-201ENST00000327154 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
RPAIN-201ENST00000327154 MYO5BQ9ULV0 1848 aa21.37■■□□□ 1.01
RPAIN-201ENST00000327154 NAIPQ13075 1403 aa21.35■■□□□ 1.01
RPAIN-201ENST00000327154 FAM135BQ49AJ0 1406 aa21.35■■□□□ 1.01
RPAIN-201ENST00000327154 MED1Q15648 1581 aaPredicted RBP21.35■■□□□ 1.01
RPAIN-201ENST00000327154 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
RPAIN-201ENST00000327154 ADAMTS13Q76LX8 1427 aa21.33■■□□□ 1.01
RPAIN-201ENST00000327154 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
RPAIN-201ENST00000327154 MSH6P52701 1360 aa21.33■■□□□ 1
RPAIN-201ENST00000327154 NWD1Q149M9 1564 aa21.32■■□□□ 1
RPAIN-201ENST00000327154 TRIM52Q96A61 297 aa21.32■■□□□ 1
RPAIN-201ENST00000327154 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
RPAIN-201ENST00000327154 SLAIN2Q9P270 581 aa21.32■■□□□ 1
RPAIN-201ENST00000327154 C14orf37Q86TY3 774 aa21.29■■□□□ 1
RPAIN-201ENST00000327154 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
RPAIN-201ENST00000327154 PIK3R4Q99570 1358 aa21.27■■□□□ 1
RPAIN-201ENST00000327154 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
RPAIN-201ENST00000327154 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
RPAIN-201ENST00000327154 NCOA3Q9Y6Q9 1424 aa21.24■□□□□ 0.99
RPAIN-201ENST00000327154 SLC4A1APQ9BWU0 796 aaKnown RBP21.24■□□□□ 0.99
RPAIN-201ENST00000327154 C19orf44Q9H6X5 657 aa21.24■□□□□ 0.99
RPAIN-201ENST00000327154 SPHKAPQ2M3C7 1700 aa21.24■□□□□ 0.99
RPAIN-201ENST00000327154 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
RPAIN-201ENST00000327154 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
RPAIN-201ENST00000327154 ATF3P18847 181 aa21.21■□□□□ 0.99
RPAIN-201ENST00000327154 ROBO1Q9Y6N7 1651 aa21.21■□□□□ 0.99
RPAIN-201ENST00000327154 TRPM2O94759 1503 aa21.2■□□□□ 0.98
RPAIN-201ENST00000327154 CADPS2Q86UW7 1296 aa21.2■□□□□ 0.98
RPAIN-201ENST00000327154 METP08581 1390 aa21.19■□□□□ 0.98
RPAIN-201ENST00000327154 CLTCL1P53675 1640 aa21.18■□□□□ 0.98
RPAIN-201ENST00000327154 FOXD1Q16676 465 aa21.17■□□□□ 0.98
RPAIN-201ENST00000327154 RGS17Q9UGC6 210 aaPredicted RBP21.17■□□□□ 0.98
RPAIN-201ENST00000327154 SETBP1Q9Y6X0 1596 aa21.16■□□□□ 0.98
RPAIN-201ENST00000327154 VGFO15240 615 aaPredicted RBP21.15■□□□□ 0.98
RPAIN-201ENST00000327154 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
RPAIN-201ENST00000327154 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
RPAIN-201ENST00000327154 RPGRIP1LQ68CZ1 1315 aa21.11■□□□□ 0.97
RPAIN-201ENST00000327154 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.11■□□□□ 0.97
RPAIN-201ENST00000327154 JCADQ9P266 1359 aa21.1■□□□□ 0.97
RPAIN-201ENST00000327154 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
RPAIN-201ENST00000327154 BRINP3Q76B58 766 aa21.09■□□□□ 0.97
RPAIN-201ENST00000327154 PHLPP1O60346 1717 aa21.08■□□□□ 0.97
RPAIN-201ENST00000327154 KIF1BO60333 1816 aa21.07■□□□□ 0.96
RPAIN-201ENST00000327154 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
RPAIN-201ENST00000327154 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
RPAIN-201ENST00000327154 DCCP43146 1447 aa21.05■□□□□ 0.96
RPAIN-201ENST00000327154 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
RPAIN-201ENST00000327154 COL16A1Q07092 1604 aaPredicted RBP21.02■□□□□ 0.96
RPAIN-201ENST00000327154 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
RPAIN-201ENST00000327154 MST1RQ04912 1400 aa21.02■□□□□ 0.96
RPAIN-201ENST00000327154 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
RPAIN-201ENST00000327154 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
RPAIN-201ENST00000327154 ROBO2Q9HCK4 1378 aa21■□□□□ 0.95
RPAIN-201ENST00000327154 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
RPAIN-201ENST00000327154 AHDC1Q5TGY3 1603 aaPredicted RBP20.99■□□□□ 0.95
RPAIN-201ENST00000327154 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
RPAIN-201ENST00000327154 MEX3CQ5U5Q3 659 aaKnown RBP20.98■□□□□ 0.95
RPAIN-201ENST00000327154 DDX17Q92841 729 aaKnown RBP20.98■□□□□ 0.95
RPAIN-201ENST00000327154 ASXL1Q8IXJ9 1541 aa20.97■□□□□ 0.95
RPAIN-201ENST00000327154 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
RPAIN-201ENST00000327154 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
RPAIN-201ENST00000327154 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
RPAIN-201ENST00000327154 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
RPAIN-201ENST00000327154 PTCH1Q13635 1447 aa20.95■□□□□ 0.95
RPAIN-201ENST00000327154 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.95
RPAIN-201ENST00000327154 LRRC59Q96AG4 307 aaKnown RBP20.95■□□□□ 0.94
RPAIN-201ENST00000327154 STK26Q9P289 416 aa20.94■□□□□ 0.94
RPAIN-201ENST00000327154 ANKRD30BQ9BXX2 1392 aa20.94■□□□□ 0.94
RPAIN-201ENST00000327154 LRP6O75581 1613 aa20.93■□□□□ 0.94
RPAIN-201ENST00000327154 PPLO60437 1756 aa20.93■□□□□ 0.94
RPAIN-201ENST00000327154 ORAI2Q96SN7 254 aa20.92■□□□□ 0.94
RPAIN-201ENST00000327154 C1orf167Q5SNV9 1468 aa20.92■□□□□ 0.94
RPAIN-201ENST00000327154 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
RPAIN-201ENST00000327154 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
RPAIN-201ENST00000327154 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
RPAIN-201ENST00000327154 PRAG1Q86YV5 1406 aa20.9■□□□□ 0.94
RPAIN-201ENST00000327154 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
RPAIN-201ENST00000327154 ZNF772Q68DY9 489 aaPredicted RBP20.89■□□□□ 0.93
RPAIN-201ENST00000327154 WAPLQ7Z5K2 1190 aa20.89■□□□□ 0.93
RPAIN-201ENST00000327154 SHPRHQ149N8 1683 aa20.87■□□□□ 0.93
RPAIN-201ENST00000327154 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
RPAIN-201ENST00000327154 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
RPAIN-201ENST00000327154 ESCO1Q5FWF5 840 aa20.84■□□□□ 0.93
RPAIN-201ENST00000327154 NHSL1Q5SYE7 1610 aa20.84■□□□□ 0.93
RPAIN-201ENST00000327154 PIK3C2GO75747 1445 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms