RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 PLCH2O75038 1416 aa17.63■□□□□ 0.41
SRRM1-201ENST00000323848 SLC26A8Q96RN1 970 aa17.63■□□□□ 0.41
SRRM1-201ENST00000323848 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
SRRM1-201ENST00000323848 APBB1O00213 710 aa17.62■□□□□ 0.41
SRRM1-201ENST00000323848 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SRRM1-201ENST00000323848 A0A0G2JS52 829 aa17.61■□□□□ 0.41
SRRM1-201ENST00000323848 DNMT1P26358 1616 aaKnown RBP17.6■□□□□ 0.41
SRRM1-201ENST00000323848 CABP1Q9NZU7 370 aa17.59■□□□□ 0.41
SRRM1-201ENST00000323848 CGNL1Q0VF96 1302 aa17.59■□□□□ 0.41
SRRM1-201ENST00000323848 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
SRRM1-201ENST00000323848 TESK2Q96S53 571 aa17.59■□□□□ 0.41
SRRM1-201ENST00000323848 BCAR3O75815 825 aa17.58■□□□□ 0.41
SRRM1-201ENST00000323848 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.41
SRRM1-201ENST00000323848 SLC4A3P48751 1232 aa17.58■□□□□ 0.4
SRRM1-201ENST00000323848 BRD4O60885 1362 aaPredicted RBP17.57■□□□□ 0.4
SRRM1-201ENST00000323848 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
SRRM1-201ENST00000323848 LRRIQ1Q96JM4 1722 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
SRRM1-201ENST00000323848 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
SRRM1-201ENST00000323848 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SRRM1-201ENST00000323848 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
SRRM1-201ENST00000323848 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
SRRM1-201ENST00000323848 NOS1P29475 1434 aa17.54■□□□□ 0.4
SRRM1-201ENST00000323848 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
SRRM1-201ENST00000323848 TSR2Q969E8 191 aaKnown RBP17.54■□□□□ 0.4
SRRM1-201ENST00000323848 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
SRRM1-201ENST00000323848 MBD5Q9P267 1494 aa17.52■□□□□ 0.4
SRRM1-201ENST00000323848 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.39
SRRM1-201ENST00000323848 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
SRRM1-201ENST00000323848 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
SRRM1-201ENST00000323848 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
SRRM1-201ENST00000323848 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
SRRM1-201ENST00000323848 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
SRRM1-201ENST00000323848 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
SRRM1-201ENST00000323848 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
SRRM1-201ENST00000323848 RIPK4P57078 832 aa17.49■□□□□ 0.39
SRRM1-201ENST00000323848 ABCC2Q92887 1545 aa17.49■□□□□ 0.39
SRRM1-201ENST00000323848 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
SRRM1-201ENST00000323848 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
SRRM1-201ENST00000323848 WDR7Q9Y4E6 1490 aa17.48■□□□□ 0.39
SRRM1-201ENST00000323848 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
SRRM1-201ENST00000323848 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
SRRM1-201ENST00000323848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRRM1-201ENST00000323848 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
SRRM1-201ENST00000323848 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
SRRM1-201ENST00000323848 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
SRRM1-201ENST00000323848 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
SRRM1-201ENST00000323848 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
SRRM1-201ENST00000323848 ABCA8O94911 1581 aa17.46■□□□□ 0.39
SRRM1-201ENST00000323848 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
SRRM1-201ENST00000323848 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
SRRM1-201ENST00000323848 NSD3Q9BZ95 1437 aa17.45■□□□□ 0.38
SRRM1-201ENST00000323848 CHD1O14646 1710 aa17.45■□□□□ 0.38
SRRM1-201ENST00000323848 A2MP01023 1474 aa17.45■□□□□ 0.38
SRRM1-201ENST00000323848 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
SRRM1-201ENST00000323848 ERICH6BQ5W0A0 696 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 COG3Q96JB2 828 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 AMPHP49418 695 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 ARHGEF12Q9NZN5 1544 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 E9PSI1 815 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
SRRM1-201ENST00000323848 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
SRRM1-201ENST00000323848 PDE4AP27815 886 aa17.43■□□□□ 0.38
SRRM1-201ENST00000323848 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
SRRM1-201ENST00000323848 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
SRRM1-201ENST00000323848 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
SRRM1-201ENST00000323848 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
SRRM1-201ENST00000323848 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
SRRM1-201ENST00000323848 SLC4A10Q6U841 1118 aa17.42■□□□□ 0.38
SRRM1-201ENST00000323848 ADGRL2O95490 1459 aa17.41■□□□□ 0.38
SRRM1-201ENST00000323848 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
SRRM1-201ENST00000323848 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
SRRM1-201ENST00000323848 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
SRRM1-201ENST00000323848 XPCQ01831 940 aaPredicted RBP17.4■□□□□ 0.38
SRRM1-201ENST00000323848 STAC3Q96MF2 364 aa17.39■□□□□ 0.38
SRRM1-201ENST00000323848 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.38
SRRM1-201ENST00000323848 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
SRRM1-201ENST00000323848 DUOX2Q9NRD8 1548 aa17.39■□□□□ 0.37
SRRM1-201ENST00000323848 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
SRRM1-201ENST00000323848 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
SRRM1-201ENST00000323848 NME9Q86XW9 330 aa17.38■□□□□ 0.37
SRRM1-201ENST00000323848 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
SRRM1-201ENST00000323848 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
SRRM1-201ENST00000323848 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
SRRM1-201ENST00000323848 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
SRRM1-201ENST00000323848 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
SRRM1-201ENST00000323848 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
SRRM1-201ENST00000323848 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
SRRM1-201ENST00000323848 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
SRRM1-201ENST00000323848 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
SRRM1-201ENST00000323848 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
SRRM1-201ENST00000323848 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
SRRM1-201ENST00000323848 PLA2R1Q13018 1463 aa17.34■□□□□ 0.37
SRRM1-201ENST00000323848 SCAF11Q99590 1463 aaKnown RBP17.34■□□□□ 0.37
SRRM1-201ENST00000323848 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.34■□□□□ 0.37
SRRM1-201ENST00000323848 NLRP6P59044 892 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms