RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 CCDC173Q0VFZ6 552 aa19.26■□□□□ 0.67
PPM1E-201ENST00000308249 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
PPM1E-201ENST00000308249 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
PPM1E-201ENST00000308249 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
PPM1E-201ENST00000308249 TRDNQ13061 729 aa19.25■□□□□ 0.67
PPM1E-201ENST00000308249 PKD2Q13563 968 aa19.25■□□□□ 0.67
PPM1E-201ENST00000308249 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
PPM1E-201ENST00000308249 ARGLU1Q9NWB6 273 aaPredicted RBP19.25■□□□□ 0.67
PPM1E-201ENST00000308249 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
PPM1E-201ENST00000308249 ANKRD62A6NC57 917 aa19.24■□□□□ 0.67
PPM1E-201ENST00000308249 RDXP35241 583 aaKnown RBP19.24■□□□□ 0.67
PPM1E-201ENST00000308249 NEFHP12036 1026 aa19.24■□□□□ 0.67
PPM1E-201ENST00000308249 LRRFIP1Q32MZ4 808 aaKnown RBP19.24■□□□□ 0.67
PPM1E-201ENST00000308249 HSP90AB3PQ58FF7 597 aa19.24■□□□□ 0.67
PPM1E-201ENST00000308249 ZKSCAN1P17029 563 aaPredicted RBP19.23■□□□□ 0.67
PPM1E-201ENST00000308249 RALBP1Q15311 655 aa19.23■□□□□ 0.67
PPM1E-201ENST00000308249 C9orf78Q9NZ63 289 aaPredicted RBP19.23■□□□□ 0.67
PPM1E-201ENST00000308249 IFIT2P09913 472 aaKnown RBP19.21■□□□□ 0.67
PPM1E-201ENST00000308249 GSE1Q14687 1217 aa19.21■□□□□ 0.67
PPM1E-201ENST00000308249 RUFY2Q8WXA3 655 aa19.21■□□□□ 0.67
PPM1E-201ENST00000308249 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
PPM1E-201ENST00000308249 TTC5Q8N0Z6 440 aa19.2■□□□□ 0.66
PPM1E-201ENST00000308249 TSPYL1Q9H0U9 437 aa19.2■□□□□ 0.66
PPM1E-201ENST00000308249 NEXNQ0ZGT2 675 aa19.2■□□□□ 0.66
PPM1E-201ENST00000308249 IKQ13123 557 aaPredicted RBP19.2■□□□□ 0.66
PPM1E-201ENST00000308249 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
PPM1E-201ENST00000308249 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
PPM1E-201ENST00000308249 CCDC27Q2M243 656 aa19.17■□□□□ 0.66
PPM1E-201ENST00000308249 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
PPM1E-201ENST00000308249 TEFQ10587 303 aa19.17■□□□□ 0.66
PPM1E-201ENST00000308249 PLIN1O60240 522 aa19.17■□□□□ 0.66
PPM1E-201ENST00000308249 WWC2Q6AWC2 1192 aa19.16■□□□□ 0.66
PPM1E-201ENST00000308249 RBM33Q96EV2 1170 aaKnown RBP19.16■□□□□ 0.66
PPM1E-201ENST00000308249 CCDC73Q6ZRK6 1079 aa19.16■□□□□ 0.66
PPM1E-201ENST00000308249 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
PPM1E-201ENST00000308249 TSHZ2Q9NRE2 1034 aa19.15■□□□□ 0.66
PPM1E-201ENST00000308249 OLFM4Q6UX06 510 aa19.15■□□□□ 0.66
PPM1E-201ENST00000308249 SMC3Q9UQE7 1217 aa19.15■□□□□ 0.66
PPM1E-201ENST00000308249 ZRSR2Q15696 482 aaKnown RBP19.14■□□□□ 0.66
PPM1E-201ENST00000308249 CCDC97Q96F63 343 aaPredicted RBP19.14■□□□□ 0.66
PPM1E-201ENST00000308249 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
PPM1E-201ENST00000308249 MYO6Q9UM54 1294 aa19.14■□□□□ 0.65
PPM1E-201ENST00000308249 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
PPM1E-201ENST00000308249 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
PPM1E-201ENST00000308249 BRPF1P55201 1214 aaPredicted RBP19.12■□□□□ 0.65
PPM1E-201ENST00000308249 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
PPM1E-201ENST00000308249 CCAR1Q8IX12 1150 aaKnown RBP19.11■□□□□ 0.65
PPM1E-201ENST00000308249 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.11■□□□□ 0.65
PPM1E-201ENST00000308249 CWC15Q9P013 229 aaKnown RBP19.11■□□□□ 0.65
PPM1E-201ENST00000308249 REC8O95072 547 aa19.11■□□□□ 0.65
PPM1E-201ENST00000308249 SEPT7Q16181 437 aaKnown RBP19.11■□□□□ 0.65
PPM1E-201ENST00000308249 ENOX2Q16206 610 aaKnown RBP19.1■□□□□ 0.65
PPM1E-201ENST00000308249 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
PPM1E-201ENST00000308249 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
PPM1E-201ENST00000308249 G3BP1Q13283 466 aaKnown RBP eCLIP19.1■□□□□ 0.65
PPM1E-201ENST00000308249 WASHC4Q2M389 1173 aa19.1■□□□□ 0.65
PPM1E-201ENST00000308249 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
PPM1E-201ENST00000308249 SYCP1Q15431 976 aa19.1■□□□□ 0.65
PPM1E-201ENST00000308249 ATP2B1P20020 1258 aa19.1■□□□□ 0.65
PPM1E-201ENST00000308249 PDE4AP27815 886 aa19.09■□□□□ 0.65
PPM1E-201ENST00000308249 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
PPM1E-201ENST00000308249 NEUROD6Q96NK8 337 aa19.09■□□□□ 0.65
PPM1E-201ENST00000308249 BRMS1Q9HCU9 246 aa19.09■□□□□ 0.65
PPM1E-201ENST00000308249 COG6Q9Y2V7 657 aa19.09■□□□□ 0.65
PPM1E-201ENST00000308249 RALYLQ86SE5 291 aaKnown RBP19.08■□□□□ 0.65
PPM1E-201ENST00000308249 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.65
PPM1E-201ENST00000308249 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.64
PPM1E-201ENST00000308249 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.64
PPM1E-201ENST00000308249 CENPQQ7L2Z9 268 aaPredicted RBP19.07■□□□□ 0.64
PPM1E-201ENST00000308249 SDF4Q9BRK5 362 aa19.06■□□□□ 0.64
PPM1E-201ENST00000308249 SMC2O95347 1197 aa19.06■□□□□ 0.64
PPM1E-201ENST00000308249 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
PPM1E-201ENST00000308249 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
PPM1E-201ENST00000308249 PDCL3Q9H2J4 239 aa19.05■□□□□ 0.64
PPM1E-201ENST00000308249 TAX1BP1Q86VP1 789 aa19.05■□□□□ 0.64
PPM1E-201ENST00000308249 RNF214Q8ND24 703 aa19.05■□□□□ 0.64
PPM1E-201ENST00000308249 CDK5RAP3Q96JB5 506 aa19.05■□□□□ 0.64
PPM1E-201ENST00000308249 KRT18P05783 430 aaKnown RBP19.04■□□□□ 0.64
PPM1E-201ENST00000308249 NAT10Q9H0A0 1025 aaKnown RBP19.04■□□□□ 0.64
PPM1E-201ENST00000308249 CRBNQ96SW2 442 aa19.04■□□□□ 0.64
PPM1E-201ENST00000308249 IBSPP21815 317 aaPredicted RBP19.04■□□□□ 0.64
PPM1E-201ENST00000308249 COG3Q96JB2 828 aa19.04■□□□□ 0.64
PPM1E-201ENST00000308249 LEKR1Q6ZMV7 388 aa19.03■□□□□ 0.64
PPM1E-201ENST00000308249 KIF3BO15066 747 aa19.03■□□□□ 0.64
PPM1E-201ENST00000308249 MAGEC2Q9UBF1 373 aaPredicted RBP19.03■□□□□ 0.64
PPM1E-201ENST00000308249 PPM1FP49593 454 aaPredicted RBP19.02■□□□□ 0.64
PPM1E-201ENST00000308249 CENPHQ9H3R5 247 aa19.02■□□□□ 0.64
PPM1E-201ENST00000308249 ERCC6Q03468 1493 aa19.02■□□□□ 0.64
PPM1E-201ENST00000308249 XBP1P17861 261 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 EXOC6Q8TAG9 804 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
PPM1E-201ENST00000308249 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
PPM1E-201ENST00000308249 ANKRD18AQ8IVF6 992 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 NUP155O75694 1391 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 AIMP1Q12904 312 aaKnown RBP19.01■□□□□ 0.63
PPM1E-201ENST00000308249 FAM177BA6PVY3 158 aa19.01■□□□□ 0.63
PPM1E-201ENST00000308249 ERLIN2O94905 339 aa19■□□□□ 0.63
PPM1E-201ENST00000308249 TRIM5Q9C035 493 aa19■□□□□ 0.63
PPM1E-201ENST00000308249 STK11IPQ8N1F8 1099 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms