RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TMEM131LA2VDJ0 1609 aa31.47■■■□□ 2.63
RER1-201ENST00000306256 SOCS7O14512 581 aa31.45■■■□□ 2.63
RER1-201ENST00000306256 ZFYVE9O95405 1425 aa31.43■■■□□ 2.62
RER1-201ENST00000306256 KCNA6P17658 529 aa31.41■■■□□ 2.62
RER1-201ENST00000306256 BCANQ96GW7 911 aa31.41■■■□□ 2.62
RER1-201ENST00000306256 RIMS2Q9UQ26 1411 aa31.41■■■□□ 2.62
RER1-201ENST00000306256 NWD1Q149M9 1564 aa31.4■■■□□ 2.62
RER1-201ENST00000306256 TMEM94Q12767 1356 aa31.4■■■□□ 2.62
RER1-201ENST00000306256 NUP155O75694 1391 aa31.38■■■□□ 2.61
RER1-201ENST00000306256 CHGAP10645 457 aaKnown RBP31.37■■■□□ 2.61
RER1-201ENST00000306256 RBM33Q96EV2 1170 aaKnown RBP31.36■■■□□ 2.61
RER1-201ENST00000306256 PLEKHG1Q9ULL1 1385 aa31.35■■■□□ 2.61
RER1-201ENST00000306256 PPP1R15AO75807 674 aaPredicted RBP31.35■■■□□ 2.61
RER1-201ENST00000306256 CHD2O14647 1828 aaKnown RBP31.35■■■□□ 2.61
RER1-201ENST00000306256 NKTRP30414 1462 aaKnown RBP31.34■■■□□ 2.61
RER1-201ENST00000306256 PROSER2Q86WR7 435 aaPredicted RBP31.34■■■□□ 2.61
RER1-201ENST00000306256 NUTM2DQ5VT03 806 aaPredicted RBP31.29■■■□□ 2.6
RER1-201ENST00000306256 SPHKAPQ2M3C7 1700 aa31.29■■■□□ 2.6
RER1-201ENST00000306256 HDGFP51858 240 aaKnown RBP31.28■■■□□ 2.6
RER1-201ENST00000306256 ROBO1Q9Y6N7 1651 aa31.25■■■□□ 2.59
RER1-201ENST00000306256 RRBP1Q9P2E9 1410 aaKnown RBP31.25■■■□□ 2.59
RER1-201ENST00000306256 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.24■■■□□ 2.59
RER1-201ENST00000306256 FAM135BQ49AJ0 1406 aa31.24■■■□□ 2.59
RER1-201ENST00000306256 ADAMTS13Q76LX8 1427 aa31.22■■■□□ 2.59
RER1-201ENST00000306256 PHF23Q9BUL5 403 aaPredicted RBP31.21■■■□□ 2.59
RER1-201ENST00000306256 TBX22Q9Y458 520 aa31.2■■■□□ 2.59
RER1-201ENST00000306256 MSH6P52701 1360 aa31.19■■■□□ 2.58
RER1-201ENST00000306256 DIP2AQ14689 1571 aa31.19■■■□□ 2.58
RER1-201ENST00000306256 NAIPQ13075 1403 aa31.15■■■□□ 2.58
RER1-201ENST00000306256 CLTCL1P53675 1640 aa31.12■■■□□ 2.57
RER1-201ENST00000306256 NRXN3Q9Y4C0 1643 aa31.12■■■□□ 2.57
RER1-201ENST00000306256 TRPM2O94759 1503 aa31.11■■■□□ 2.57
RER1-201ENST00000306256 PIK3R4Q99570 1358 aa31.08■■■□□ 2.57
RER1-201ENST00000306256 PHLPP1O60346 1717 aa31.08■■■□□ 2.57
RER1-201ENST00000306256 SLAIN2Q9P270 581 aa31.08■■■□□ 2.57
RER1-201ENST00000306256 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.07■■■□□ 2.56
RER1-201ENST00000306256 C14orf37Q86TY3 774 aa31.07■■■□□ 2.56
RER1-201ENST00000306256 KIF1BO60333 1816 aa31.07■■■□□ 2.56
RER1-201ENST00000306256 ZNF326Q5BKZ1 582 aaKnown RBP31.06■■■□□ 2.56
RER1-201ENST00000306256 PTPRUQ92729 1446 aa31.06■■■□□ 2.56
RER1-201ENST00000306256 SETBP1Q9Y6X0 1596 aa31.05■■■□□ 2.56
RER1-201ENST00000306256 NCOA3Q9Y6Q9 1424 aa31.04■■■□□ 2.56
RER1-201ENST00000306256 XRN1Q8IZH2 1706 aaKnown RBP31.02■■■□□ 2.56
RER1-201ENST00000306256 AMOTL2Q9Y2J4 779 aa31.02■■■□□ 2.56
RER1-201ENST00000306256 HFM1A2PYH4 1435 aa31.01■■■□□ 2.55
RER1-201ENST00000306256 NEXMIFQ5QGS0 1516 aa31.01■■■□□ 2.55
RER1-201ENST00000306256 TRIM52Q96A61 297 aa30.99■■■□□ 2.55
RER1-201ENST00000306256 RGS17Q9UGC6 210 aaPredicted RBP30.99■■■□□ 2.55
RER1-201ENST00000306256 COL16A1Q07092 1604 aaPredicted RBP30.96■■■□□ 2.55
RER1-201ENST00000306256 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.55
RER1-201ENST00000306256 METP08581 1390 aa30.93■■■□□ 2.54
RER1-201ENST00000306256 ATF3P18847 181 aa30.93■■■□□ 2.54
RER1-201ENST00000306256 CADPS2Q86UW7 1296 aa30.93■■■□□ 2.54
RER1-201ENST00000306256 JCADQ9P266 1359 aa30.89■■■□□ 2.54
RER1-201ENST00000306256 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
RER1-201ENST00000306256 AHDC1Q5TGY3 1603 aaPredicted RBP30.87■■■□□ 2.53
RER1-201ENST00000306256 SETD1AO15047 1707 aaKnown RBP30.86■■■□□ 2.53
RER1-201ENST00000306256 DCCP43146 1447 aa30.84■■■□□ 2.53
RER1-201ENST00000306256 PPLO60437 1756 aa30.84■■■□□ 2.53
RER1-201ENST00000306256 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
RER1-201ENST00000306256 POTEAQ6S8J7 498 aa30.82■■■□□ 2.52
RER1-201ENST00000306256 BRINP3Q76B58 766 aa30.8■■■□□ 2.52
RER1-201ENST00000306256 SHPRHQ149N8 1683 aa30.79■■■□□ 2.52
RER1-201ENST00000306256 FOXD1Q16676 465 aa30.79■■■□□ 2.52
RER1-201ENST00000306256 MST1RQ04912 1400 aa30.79■■■□□ 2.52
RER1-201ENST00000306256 ADGRL3Q9HAR2 1447 aa30.78■■■□□ 2.52
RER1-201ENST00000306256 ASXL1Q8IXJ9 1541 aa30.78■■■□□ 2.52
RER1-201ENST00000306256 LRP6O75581 1613 aa30.77■■■□□ 2.52
RER1-201ENST00000306256 VGFO15240 615 aaPredicted RBP30.75■■■□□ 2.51
RER1-201ENST00000306256 NHSL1Q5SYE7 1610 aa30.74■■■□□ 2.51
RER1-201ENST00000306256 RPGRIP1LQ68CZ1 1315 aa30.73■■■□□ 2.51
RER1-201ENST00000306256 SPATA31A6Q5VVP1 1343 aa30.72■■■□□ 2.51
RER1-201ENST00000306256 PTCH1Q13635 1447 aa30.7■■■□□ 2.5
RER1-201ENST00000306256 ROBO2Q9HCK4 1378 aa30.68■■■□□ 2.5
RER1-201ENST00000306256 CCDC144AA2RUR9 1427 aa30.67■■■□□ 2.5
RER1-201ENST00000306256 MEX3CQ5U5Q3 659 aaKnown RBP30.66■■■□□ 2.5
RER1-201ENST00000306256 IFT172Q9UG01 1749 aa30.66■■■□□ 2.5
RER1-201ENST00000306256 MPHOSPH9Q99550 1183 aa30.65■■■□□ 2.5
RER1-201ENST00000306256 DDX17Q92841 729 aaKnown RBP30.64■■■□□ 2.5
RER1-201ENST00000306256 PRAG1Q86YV5 1406 aa30.63■■■□□ 2.49
RER1-201ENST00000306256 SPATA31E1Q6ZUB1 1445 aa30.62■■■□□ 2.49
RER1-201ENST00000306256 SETD5Q9C0A6 1442 aa30.62■■■□□ 2.49
RER1-201ENST00000306256 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
RER1-201ENST00000306256 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
RER1-201ENST00000306256 RGL3Q3MIN7 710 aa30.61■■■□□ 2.49
RER1-201ENST00000306256 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
RER1-201ENST00000306256 C1orf167Q5SNV9 1468 aa30.61■■■□□ 2.49
RER1-201ENST00000306256 ADGRF5Q8IZF2 1346 aa30.6■■■□□ 2.49
RER1-201ENST00000306256 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
RER1-201ENST00000306256 LAMC1P11047 1609 aa30.54■■■□□ 2.48
RER1-201ENST00000306256 PNPLA6Q8IY17 1366 aa30.53■■■□□ 2.48
RER1-201ENST00000306256 ANKRD30BQ9BXX2 1392 aa30.53■■■□□ 2.48
RER1-201ENST00000306256 ZNF772Q68DY9 489 aaPredicted RBP30.52■■■□□ 2.48
RER1-201ENST00000306256 ORAI2Q96SN7 254 aa30.51■■■□□ 2.47
RER1-201ENST00000306256 CDC42BPGQ6DT37 1551 aa30.49■■■□□ 2.47
RER1-201ENST00000306256 KNDC1Q76NI1 1749 aa30.48■■■□□ 2.47
RER1-201ENST00000306256 STK26Q9P289 416 aa30.48■■■□□ 2.47
RER1-201ENST00000306256 PIK3C2GO75747 1445 aa30.47■■■□□ 2.47
RER1-201ENST00000306256 TECPR2O15040 1411 aa30.46■■■□□ 2.47
RER1-201ENST00000306256 TMEM132EQ6IEE7 984 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms