RNA–Protein interactions for RNA: ENST00000297157.7

RP9-201, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RP9, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-201ENST00000297157 ROCK1Q13464 1354 aa39.08■■■■□ 3.85
RP9-201ENST00000297157 SLC26A8Q96RN1 970 aa39.08■■■■□ 3.85
RP9-201ENST00000297157 MYO5BQ9ULV0 1848 aa39.07■■■■□ 3.85
RP9-201ENST00000297157 TMEM131LA2VDJ0 1609 aa39.07■■■■□ 3.84
RP9-201ENST00000297157 FAM135BQ49AJ0 1406 aa39.06■■■■□ 3.84
RP9-201ENST00000297157 SENP3Q9H4L4 574 aaPredicted RBP39.02■■■■□ 3.84
RP9-201ENST00000297157 E9PCH4 1651 aa39.02■■■■□ 3.84
RP9-201ENST00000297157 IQGAP3Q86VI3 1631 aa39.01■■■■□ 3.84
RP9-201ENST00000297157 PLEKHG1Q9ULL1 1385 aa39.01■■■■□ 3.84
RP9-201ENST00000297157 RIMS2Q9UQ26 1411 aa38.98■■■■□ 3.83
RP9-201ENST00000297157 PHF23Q9BUL5 403 aaPredicted RBP38.98■■■■□ 3.83
RP9-201ENST00000297157 PROSER2Q86WR7 435 aaPredicted RBP38.96■■■■□ 3.83
RP9-201ENST00000297157 CHD2O14647 1828 aaKnown RBP38.94■■■■□ 3.82
RP9-201ENST00000297157 ROBO1Q9Y6N7 1651 aa38.93■■■■□ 3.82
RP9-201ENST00000297157 RBM33Q96EV2 1170 aaKnown RBP38.89■■■■□ 3.82
RP9-201ENST00000297157 HDGFP51858 240 aaKnown RBP38.88■■■■□ 3.81
RP9-201ENST00000297157 BCANQ96GW7 911 aa38.87■■■■□ 3.81
RP9-201ENST00000297157 PPP1R15AO75807 674 aaPredicted RBP38.86■■■■□ 3.81
RP9-201ENST00000297157 MSH6P52701 1360 aa38.84■■■■□ 3.81
RP9-201ENST00000297157 DIP2AQ14689 1571 aa38.82■■■■□ 3.81
RP9-201ENST00000297157 ADAMTS13Q76LX8 1427 aa38.82■■■■□ 3.81
RP9-201ENST00000297157 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.82■■■■□ 3.8
RP9-201ENST00000297157 TBX22Q9Y458 520 aa38.82■■■■□ 3.8
RP9-201ENST00000297157 NUP155O75694 1391 aa38.82■■■■□ 3.8
RP9-201ENST00000297157 ITGAEP38570 1179 aa38.79■■■■□ 3.8
RP9-201ENST00000297157 RGS17Q9UGC6 210 aaPredicted RBP38.78■■■■□ 3.8
RP9-201ENST00000297157 CHGAP10645 457 aaKnown RBP38.77■■■■□ 3.8
RP9-201ENST00000297157 NCOA3Q9Y6Q9 1424 aa38.77■■■■□ 3.8
RP9-201ENST00000297157 PIK3R4Q99570 1358 aa38.74■■■■□ 3.79
RP9-201ENST00000297157 SLAIN2Q9P270 581 aa38.72■■■■□ 3.79
RP9-201ENST00000297157 SPHKAPQ2M3C7 1700 aa38.69■■■■□ 3.78
RP9-201ENST00000297157 NUTM2DQ5VT03 806 aaPredicted RBP38.68■■■■□ 3.78
RP9-201ENST00000297157 NAIPQ13075 1403 aa38.68■■■■□ 3.78
RP9-201ENST00000297157 PHLPP1O60346 1717 aa38.67■■■■□ 3.78
RP9-201ENST00000297157 TRPM2O94759 1503 aa38.67■■■■□ 3.78
RP9-201ENST00000297157 NRXN3Q9Y4C0 1643 aa38.63■■■■□ 3.77
RP9-201ENST00000297157 HFM1A2PYH4 1435 aa38.63■■■■□ 3.77
RP9-201ENST00000297157 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.62■■■■□ 3.77
RP9-201ENST00000297157 COL16A1Q07092 1604 aaPredicted RBP38.62■■■■□ 3.77
RP9-201ENST00000297157 SETBP1Q9Y6X0 1596 aa38.61■■■■□ 3.77
RP9-201ENST00000297157 PTPRUQ92729 1446 aa38.6■■■■□ 3.77
RP9-201ENST00000297157 JCADQ9P266 1359 aa38.57■■■■□ 3.77
RP9-201ENST00000297157 XRN1Q8IZH2 1706 aaKnown RBP38.56■■■■□ 3.76
RP9-201ENST00000297157 C19orf44Q9H6X5 657 aa38.54■■■■□ 3.76
RP9-201ENST00000297157 AHDC1Q5TGY3 1603 aaPredicted RBP38.53■■■■□ 3.76
RP9-201ENST00000297157 CADPS2Q86UW7 1296 aa38.53■■■■□ 3.76
RP9-201ENST00000297157 C14orf37Q86TY3 774 aa38.52■■■■□ 3.76
RP9-201ENST00000297157 AMOTL2Q9Y2J4 779 aa38.52■■■■□ 3.76
RP9-201ENST00000297157 POTEAQ6S8J7 498 aa38.51■■■■□ 3.76
RP9-201ENST00000297157 CLTCL1P53675 1640 aa38.51■■■■□ 3.76
RP9-201ENST00000297157 DCCP43146 1447 aa38.48■■■■□ 3.75
RP9-201ENST00000297157 NEXMIFQ5QGS0 1516 aa38.47■■■■□ 3.75
RP9-201ENST00000297157 ATF3P18847 181 aa38.45■■■■□ 3.75
RP9-201ENST00000297157 SHPRHQ149N8 1683 aa38.41■■■■□ 3.74
RP9-201ENST00000297157 ZNF326Q5BKZ1 582 aaKnown RBP38.4■■■■□ 3.74
RP9-201ENST00000297157 LRP6O75581 1613 aa38.4■■■■□ 3.74
RP9-201ENST00000297157 METP08581 1390 aa38.4■■■■□ 3.74
RP9-201ENST00000297157 SPATA31A6Q5VVP1 1343 aa38.38■■■■□ 3.73
RP9-201ENST00000297157 KIF1BO60333 1816 aa38.37■■■■□ 3.73
RP9-201ENST00000297157 BRINP3Q76B58 766 aa38.35■■■■□ 3.73
RP9-201ENST00000297157 ASXL1Q8IXJ9 1541 aa38.33■■■■□ 3.73
RP9-201ENST00000297157 MST1RQ04912 1400 aa38.33■■■■□ 3.73
RP9-201ENST00000297157 ADGRL3Q9HAR2 1447 aa38.29■■■■□ 3.72
RP9-201ENST00000297157 NHSL1Q5SYE7 1610 aa38.28■■■■□ 3.72
RP9-201ENST00000297157 SETD1AO15047 1707 aaKnown RBP38.27■■■■□ 3.72
RP9-201ENST00000297157 NALCNQ8IZF0 1738 aa38.27■■■■□ 3.72
RP9-201ENST00000297157 SETD5Q9C0A6 1442 aa38.23■■■■□ 3.71
RP9-201ENST00000297157 PTCH1Q13635 1447 aa38.21■■■■□ 3.71
RP9-201ENST00000297157 PRAG1Q86YV5 1406 aa38.2■■■■□ 3.71
RP9-201ENST00000297157 MEX3CQ5U5Q3 659 aaKnown RBP38.16■■■■□ 3.7
RP9-201ENST00000297157 TRIM52Q96A61 297 aa38.16■■■■□ 3.7
RP9-201ENST00000297157 VGFO15240 615 aaPredicted RBP38.15■■■■□ 3.7
RP9-201ENST00000297157 PPLO60437 1756 aa38.14■■■■□ 3.7
RP9-201ENST00000297157 ZNF772Q68DY9 489 aaPredicted RBP38.14■■■■□ 3.7
RP9-201ENST00000297157 RPGRIP1LQ68CZ1 1315 aa38.13■■■■□ 3.7
RP9-201ENST00000297157 ACIN1Q9UKV3 1341 aaKnown RBP38.12■■■■□ 3.69
RP9-201ENST00000297157 SLC4A1APQ9BWU0 796 aaKnown RBP38.12■■■■□ 3.69
RP9-201ENST00000297157 LAMC1P11047 1609 aa38.09■■■■□ 3.69
RP9-201ENST00000297157 ROBO2Q9HCK4 1378 aa38.09■■■■□ 3.69
RP9-201ENST00000297157 C1orf167Q5SNV9 1468 aa38.09■■■■□ 3.69
RP9-201ENST00000297157 LRRC59Q96AG4 307 aaKnown RBP38.06■■■■□ 3.68
RP9-201ENST00000297157 PNPLA6Q8IY17 1366 aa38.03■■■■□ 3.68
RP9-201ENST00000297157 NUTM2BA6NNL0 878 aaPredicted RBP38.02■■■■□ 3.68
RP9-201ENST00000297157 NUTM2EB1AL46 878 aaPredicted RBP38.02■■■■□ 3.68
RP9-201ENST00000297157 NUTM2AQ8IVF1 878 aaPredicted RBP38.02■■■■□ 3.68
RP9-201ENST00000297157 DDX17Q92841 729 aaKnown RBP38.02■■■■□ 3.68
RP9-201ENST00000297157 RAB3GAP2Q9H2M9 1393 aa38.02■■■■□ 3.68
RP9-201ENST00000297157 MPHOSPH9Q99550 1183 aa37.99■■■■□ 3.67
RP9-201ENST00000297157 CDK12Q9NYV4 1490 aaPredicted RBP37.98■■■■□ 3.67
RP9-201ENST00000297157 HRCP23327 699 aa37.96■■■■□ 3.67
RP9-201ENST00000297157 AFF2P51816 1311 aa37.95■■■■□ 3.67
RP9-201ENST00000297157 FOXD1Q16676 465 aa37.94■■■■□ 3.66
RP9-201ENST00000297157 SPATA31E1Q6ZUB1 1445 aa37.94■■■■□ 3.66
RP9-201ENST00000297157 CCDC144AA2RUR9 1427 aa37.93■■■■□ 3.66
RP9-201ENST00000297157 IFT172Q9UG01 1749 aa37.92■■■■□ 3.66
RP9-201ENST00000297157 RXRBP28702 533 aa37.92■■■■□ 3.66
RP9-201ENST00000297157 CDC42BPGQ6DT37 1551 aa37.92■■■■□ 3.66
RP9-201ENST00000297157 SOS2Q07890 1332 aaPredicted RBP37.91■■■■□ 3.66
RP9-201ENST00000297157 ORAI2Q96SN7 254 aa37.89■■■■□ 3.66
RP9-201ENST00000297157 ADGRF5Q8IZF2 1346 aa37.87■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms