RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 NWD1Q149M9 1564 aa38.63■■■■□ 3.77
U2AF1-201ENST00000291552 NUP155O75694 1391 aa38.62■■■■□ 3.77
U2AF1-201ENST00000291552 SLC26A8Q96RN1 970 aa38.61■■■■□ 3.77
U2AF1-201ENST00000291552 RIMS2Q9UQ26 1411 aa38.6■■■■□ 3.77
U2AF1-201ENST00000291552 PLEKHG1Q9ULL1 1385 aa38.55■■■■□ 3.76
U2AF1-201ENST00000291552 MED1Q15648 1581 aaPredicted RBP38.54■■■■□ 3.76
U2AF1-201ENST00000291552 KCNA6P17658 529 aa38.54■■■■□ 3.76
U2AF1-201ENST00000291552 SPHKAPQ2M3C7 1700 aa38.54■■■■□ 3.76
U2AF1-201ENST00000291552 CHD2O14647 1828 aaKnown RBP38.53■■■■□ 3.76
U2AF1-201ENST00000291552 TMEM94Q12767 1356 aa38.52■■■■□ 3.76
U2AF1-201ENST00000291552 NKTRP30414 1462 aaKnown RBP38.51■■■■□ 3.76
U2AF1-201ENST00000291552 SENP3Q9H4L4 574 aaPredicted RBP38.49■■■■□ 3.75
U2AF1-201ENST00000291552 NAIPQ13075 1403 aa38.46■■■■□ 3.75
U2AF1-201ENST00000291552 CHGAP10645 457 aaKnown RBP38.45■■■■□ 3.75
U2AF1-201ENST00000291552 PPP1R15AO75807 674 aaPredicted RBP38.43■■■■□ 3.74
U2AF1-201ENST00000291552 BCANQ96GW7 911 aa38.42■■■■□ 3.74
U2AF1-201ENST00000291552 ADAMTS13Q76LX8 1427 aa38.41■■■■□ 3.74
U2AF1-201ENST00000291552 RBM33Q96EV2 1170 aaKnown RBP38.41■■■■□ 3.74
U2AF1-201ENST00000291552 PROSER2Q86WR7 435 aaPredicted RBP38.39■■■■□ 3.74
U2AF1-201ENST00000291552 NUTM2DQ5VT03 806 aaPredicted RBP38.38■■■■□ 3.73
U2AF1-201ENST00000291552 DIP2AQ14689 1571 aa38.38■■■■□ 3.73
U2AF1-201ENST00000291552 HDGFP51858 240 aaKnown RBP38.37■■■■□ 3.73
U2AF1-201ENST00000291552 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.37■■■■□ 3.73
U2AF1-201ENST00000291552 CLTCL1P53675 1640 aa38.35■■■■□ 3.73
U2AF1-201ENST00000291552 ROBO1Q9Y6N7 1651 aa38.33■■■■□ 3.73
U2AF1-201ENST00000291552 TBX22Q9Y458 520 aa38.33■■■■□ 3.73
U2AF1-201ENST00000291552 NRXN3Q9Y4C0 1643 aa38.33■■■■□ 3.73
U2AF1-201ENST00000291552 FAM135BQ49AJ0 1406 aa38.32■■■■□ 3.73
U2AF1-201ENST00000291552 HFM1A2PYH4 1435 aa38.31■■■■□ 3.72
U2AF1-201ENST00000291552 SOCS7O14512 581 aa38.31■■■■□ 3.72
U2AF1-201ENST00000291552 TRPM2O94759 1503 aa38.31■■■■□ 3.72
U2AF1-201ENST00000291552 SETBP1Q9Y6X0 1596 aa38.24■■■■□ 3.71
U2AF1-201ENST00000291552 MSH6P52701 1360 aa38.23■■■■□ 3.71
U2AF1-201ENST00000291552 KIF1BO60333 1816 aa38.23■■■■□ 3.71
U2AF1-201ENST00000291552 PIK3R4Q99570 1358 aa38.22■■■■□ 3.71
U2AF1-201ENST00000291552 PTPRUQ92729 1446 aa38.21■■■■□ 3.71
U2AF1-201ENST00000291552 NEXMIFQ5QGS0 1516 aa38.21■■■■□ 3.71
U2AF1-201ENST00000291552 XRN1Q8IZH2 1706 aaKnown RBP38.18■■■■□ 3.7
U2AF1-201ENST00000291552 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.16■■■■□ 3.7
U2AF1-201ENST00000291552 NCOA3Q9Y6Q9 1424 aa38.16■■■■□ 3.7
U2AF1-201ENST00000291552 ZNF326Q5BKZ1 582 aaKnown RBP38.11■■■■□ 3.69
U2AF1-201ENST00000291552 PHLPP1O60346 1717 aa38.09■■■■□ 3.69
U2AF1-201ENST00000291552 TRIM52Q96A61 297 aa38.09■■■■□ 3.69
U2AF1-201ENST00000291552 SLAIN2Q9P270 581 aa38.09■■■■□ 3.69
U2AF1-201ENST00000291552 AMOTL2Q9Y2J4 779 aa38.07■■■■□ 3.68
U2AF1-201ENST00000291552 METP08581 1390 aa38.05■■■■□ 3.68
U2AF1-201ENST00000291552 PHF23Q9BUL5 403 aaPredicted RBP38.04■■■■□ 3.68
U2AF1-201ENST00000291552 SETD1AO15047 1707 aaKnown RBP38.04■■■■□ 3.68
U2AF1-201ENST00000291552 COL16A1Q07092 1604 aaPredicted RBP38.01■■■■□ 3.68
U2AF1-201ENST00000291552 SLC4A1APQ9BWU0 796 aaKnown RBP38■■■■□ 3.67
U2AF1-201ENST00000291552 PPLO60437 1756 aa38■■■■□ 3.67
U2AF1-201ENST00000291552 C14orf37Q86TY3 774 aa37.99■■■■□ 3.67
U2AF1-201ENST00000291552 C19orf44Q9H6X5 657 aa37.97■■■■□ 3.67
U2AF1-201ENST00000291552 RGS17Q9UGC6 210 aaPredicted RBP37.94■■■■□ 3.66
U2AF1-201ENST00000291552 AHDC1Q5TGY3 1603 aaPredicted RBP37.93■■■■□ 3.66
U2AF1-201ENST00000291552 NALCNQ8IZF0 1738 aa37.92■■■■□ 3.66
U2AF1-201ENST00000291552 CADPS2Q86UW7 1296 aa37.92■■■■□ 3.66
U2AF1-201ENST00000291552 DCCP43146 1447 aa37.92■■■■□ 3.66
U2AF1-201ENST00000291552 FOXD1Q16676 465 aa37.91■■■■□ 3.66
U2AF1-201ENST00000291552 ATF3P18847 181 aa37.89■■■■□ 3.66
U2AF1-201ENST00000291552 JCADQ9P266 1359 aa37.85■■■■□ 3.65
U2AF1-201ENST00000291552 MST1RQ04912 1400 aa37.84■■■■□ 3.65
U2AF1-201ENST00000291552 ADGRL3Q9HAR2 1447 aa37.84■■■■□ 3.65
U2AF1-201ENST00000291552 IFT172Q9UG01 1749 aa37.83■■■■□ 3.65
U2AF1-201ENST00000291552 RPGRIP1LQ68CZ1 1315 aa37.83■■■■□ 3.65
U2AF1-201ENST00000291552 SHPRHQ149N8 1683 aa37.8■■■■□ 3.64
U2AF1-201ENST00000291552 VGFO15240 615 aaPredicted RBP37.8■■■■□ 3.64
U2AF1-201ENST00000291552 ASXL1Q8IXJ9 1541 aa37.8■■■■□ 3.64
U2AF1-201ENST00000291552 BRINP3Q76B58 766 aa37.79■■■■□ 3.64
U2AF1-201ENST00000291552 NHSL1Q5SYE7 1610 aa37.79■■■■□ 3.64
U2AF1-201ENST00000291552 PTCH1Q13635 1447 aa37.78■■■■□ 3.64
U2AF1-201ENST00000291552 SPATA31E1Q6ZUB1 1445 aa37.78■■■■□ 3.64
U2AF1-201ENST00000291552 PRAG1Q86YV5 1406 aa37.78■■■■□ 3.64
U2AF1-201ENST00000291552 MPHOSPH9Q99550 1183 aa37.77■■■■□ 3.64
U2AF1-201ENST00000291552 CCDC144AA2RUR9 1427 aa37.77■■■■□ 3.64
U2AF1-201ENST00000291552 LRP6O75581 1613 aa37.75■■■■□ 3.63
U2AF1-201ENST00000291552 ROBO2Q9HCK4 1378 aa37.74■■■■□ 3.63
U2AF1-201ENST00000291552 POTEAQ6S8J7 498 aa37.7■■■■□ 3.63
U2AF1-201ENST00000291552 SETD5Q9C0A6 1442 aa37.7■■■■□ 3.62
U2AF1-201ENST00000291552 ADGRF5Q8IZF2 1346 aa37.66■■■■□ 3.62
U2AF1-201ENST00000291552 SPATA31A6Q5VVP1 1343 aa37.63■■■■□ 3.62
U2AF1-201ENST00000291552 C1orf167Q5SNV9 1468 aa37.62■■■■□ 3.61
U2AF1-201ENST00000291552 RGL3Q3MIN7 710 aa37.61■■■■□ 3.61
U2AF1-201ENST00000291552 LAMC1P11047 1609 aa37.6■■■■□ 3.61
U2AF1-201ENST00000291552 ANKRD30BQ9BXX2 1392 aa37.58■■■■□ 3.61
U2AF1-201ENST00000291552 RAB3GAP2Q9H2M9 1393 aa37.58■■■■□ 3.61
U2AF1-201ENST00000291552 KNDC1Q76NI1 1749 aa37.56■■■■□ 3.6
U2AF1-201ENST00000291552 PIK3C2GO75747 1445 aa37.56■■■■□ 3.6
U2AF1-201ENST00000291552 DDX17Q92841 729 aaKnown RBP37.56■■■■□ 3.6
U2AF1-201ENST00000291552 TECPR2O15040 1411 aa37.53■■■■□ 3.6
U2AF1-201ENST00000291552 CDC42BPGQ6DT37 1551 aa37.53■■■■□ 3.6
U2AF1-201ENST00000291552 ACIN1Q9UKV3 1341 aaKnown RBP37.51■■■■□ 3.6
U2AF1-201ENST00000291552 LRPPRCP42704 1394 aaKnown RBP37.47■■■■□ 3.59
U2AF1-201ENST00000291552 NRXN1Q9ULB1 1477 aa37.46■■■■□ 3.59
U2AF1-201ENST00000291552 PNPLA6Q8IY17 1366 aa37.45■■■■□ 3.59
U2AF1-201ENST00000291552 MEX3CQ5U5Q3 659 aaKnown RBP37.45■■■■□ 3.59
U2AF1-201ENST00000291552 ORAI2Q96SN7 254 aa37.45■■■■□ 3.59
U2AF1-201ENST00000291552 MYOM2P54296 1465 aa37.43■■■■□ 3.58
U2AF1-201ENST00000291552 LRRC59Q96AG4 307 aaKnown RBP37.42■■■■□ 3.58
U2AF1-201ENST00000291552 ABCC11Q96J66 1382 aa37.42■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms