RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 SLC26A8Q96RN1 970 aa29.35■■■□□ 2.29
MSGN1-201ENST00000281047 NAIPQ13075 1403 aa29.35■■■□□ 2.29
MSGN1-201ENST00000281047 PLEKHG1Q9ULL1 1385 aa29.32■■■□□ 2.28
MSGN1-201ENST00000281047 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.32■■■□□ 2.28
MSGN1-201ENST00000281047 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
MSGN1-201ENST00000281047 KCNA6P17658 529 aa29.31■■■□□ 2.28
MSGN1-201ENST00000281047 DISP3Q9P2K9 1392 aa29.3■■■□□ 2.28
MSGN1-201ENST00000281047 HFM1A2PYH4 1435 aa29.28■■■□□ 2.28
MSGN1-201ENST00000281047 ALKQ9UM73 1620 aa29.28■■■□□ 2.28
MSGN1-201ENST00000281047 HSPA1LP34931 641 aa29.26■■■□□ 2.27
MSGN1-201ENST00000281047 SPHKAPQ2M3C7 1700 aa29.24■■■□□ 2.27
MSGN1-201ENST00000281047 NKTRP30414 1462 aaKnown RBP29.23■■■□□ 2.27
MSGN1-201ENST00000281047 PROSER2Q86WR7 435 aaPredicted RBP29.22■■■□□ 2.27
MSGN1-201ENST00000281047 SENP3Q9H4L4 574 aaPredicted RBP29.22■■■□□ 2.27
MSGN1-201ENST00000281047 TMEM94Q12767 1356 aa29.22■■■□□ 2.27
MSGN1-201ENST00000281047 NWD1Q149M9 1564 aa29.22■■■□□ 2.27
MSGN1-201ENST00000281047 TRIM52Q96A61 297 aa29.2■■■□□ 2.26
MSGN1-201ENST00000281047 TBX22Q9Y458 520 aa29.2■■■□□ 2.26
MSGN1-201ENST00000281047 XIRP1Q702N8 1843 aaKnown RBP29.2■■■□□ 2.26
MSGN1-201ENST00000281047 NUTM2DQ5VT03 806 aaPredicted RBP29.18■■■□□ 2.26
MSGN1-201ENST00000281047 DIP2AQ14689 1571 aa29.16■■■□□ 2.26
MSGN1-201ENST00000281047 TRPM2O94759 1503 aa29.15■■■□□ 2.26
MSGN1-201ENST00000281047 ZNF326Q5BKZ1 582 aaKnown RBP29.14■■■□□ 2.26
MSGN1-201ENST00000281047 ADAMTS13Q76LX8 1427 aa29.13■■■□□ 2.25
MSGN1-201ENST00000281047 PIK3R4Q99570 1358 aa29.12■■■□□ 2.25
MSGN1-201ENST00000281047 CHD2O14647 1828 aaKnown RBP29.11■■■□□ 2.25
MSGN1-201ENST00000281047 SLC4A1APQ9BWU0 796 aaKnown RBP29.11■■■□□ 2.25
MSGN1-201ENST00000281047 CLTCL1P53675 1640 aa29.1■■■□□ 2.25
MSGN1-201ENST00000281047 RBM33Q96EV2 1170 aaKnown RBP29.1■■■□□ 2.25
MSGN1-201ENST00000281047 MSH6P52701 1360 aa29.09■■■□□ 2.25
MSGN1-201ENST00000281047 FAM135BQ49AJ0 1406 aa29.06■■■□□ 2.24
MSGN1-201ENST00000281047 NCOA3Q9Y6Q9 1424 aa29.04■■■□□ 2.24
MSGN1-201ENST00000281047 SETBP1Q9Y6X0 1596 aa29.03■■■□□ 2.24
MSGN1-201ENST00000281047 ILDR2Q71H61 639 aa29.02■■■□□ 2.24
MSGN1-201ENST00000281047 KIF1BO60333 1816 aa29.01■■■□□ 2.24
MSGN1-201ENST00000281047 MED1Q15648 1581 aaPredicted RBP29.01■■■□□ 2.23
MSGN1-201ENST00000281047 NEXMIFQ5QGS0 1516 aa29■■■□□ 2.23
MSGN1-201ENST00000281047 C14orf37Q86TY3 774 aa28.99■■■□□ 2.23
MSGN1-201ENST00000281047 AMOTL2Q9Y2J4 779 aa28.98■■■□□ 2.23
MSGN1-201ENST00000281047 NRXN3Q9Y4C0 1643 aa28.98■■■□□ 2.23
MSGN1-201ENST00000281047 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
MSGN1-201ENST00000281047 SLAIN2Q9P270 581 aa28.96■■■□□ 2.23
MSGN1-201ENST00000281047 PTPRUQ92729 1446 aa28.95■■■□□ 2.23
MSGN1-201ENST00000281047 ROBO1Q9Y6N7 1651 aa28.95■■■□□ 2.22
MSGN1-201ENST00000281047 VGFO15240 615 aaPredicted RBP28.93■■■□□ 2.22
MSGN1-201ENST00000281047 RPGRIP1LQ68CZ1 1315 aa28.93■■■□□ 2.22
MSGN1-201ENST00000281047 C19orf44Q9H6X5 657 aa28.92■■■□□ 2.22
MSGN1-201ENST00000281047 FOXD1Q16676 465 aa28.91■■■□□ 2.22
MSGN1-201ENST00000281047 MPHOSPH9Q99550 1183 aa28.91■■■□□ 2.22
MSGN1-201ENST00000281047 METP08581 1390 aa28.9■■■□□ 2.22
MSGN1-201ENST00000281047 CADPS2Q86UW7 1296 aa28.9■■■□□ 2.22
MSGN1-201ENST00000281047 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.22
MSGN1-201ENST00000281047 CCDC144AA2RUR9 1427 aa28.88■■■□□ 2.21
MSGN1-201ENST00000281047 SETD5Q9C0A6 1442 aa28.88■■■□□ 2.21
MSGN1-201ENST00000281047 ATF3P18847 181 aa28.88■■■□□ 2.21
MSGN1-201ENST00000281047 PHF23Q9BUL5 403 aaPredicted RBP28.87■■■□□ 2.21
MSGN1-201ENST00000281047 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.85■■■□□ 2.21
MSGN1-201ENST00000281047 SOCS7O14512 581 aa28.84■■■□□ 2.21
MSGN1-201ENST00000281047 DCCP43146 1447 aa28.82■■■□□ 2.2
MSGN1-201ENST00000281047 PPLO60437 1756 aa28.8■■■□□ 2.2
MSGN1-201ENST00000281047 PHLPP1O60346 1717 aa28.77■■■□□ 2.2
MSGN1-201ENST00000281047 SPATA31E1Q6ZUB1 1445 aa28.76■■■□□ 2.19
MSGN1-201ENST00000281047 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
MSGN1-201ENST00000281047 RGL3Q3MIN7 710 aa28.74■■■□□ 2.19
MSGN1-201ENST00000281047 PTCH1Q13635 1447 aa28.74■■■□□ 2.19
MSGN1-201ENST00000281047 ADGRL3Q9HAR2 1447 aa28.74■■■□□ 2.19
MSGN1-201ENST00000281047 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
MSGN1-201ENST00000281047 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
MSGN1-201ENST00000281047 JCADQ9P266 1359 aa28.72■■■□□ 2.19
MSGN1-201ENST00000281047 PRAG1Q86YV5 1406 aa28.69■■■□□ 2.18
MSGN1-201ENST00000281047 AHDC1Q5TGY3 1603 aaPredicted RBP28.69■■■□□ 2.18
MSGN1-201ENST00000281047 BRINP3Q76B58 766 aa28.69■■■□□ 2.18
MSGN1-201ENST00000281047 COL16A1Q07092 1604 aaPredicted RBP28.69■■■□□ 2.18
MSGN1-201ENST00000281047 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
MSGN1-201ENST00000281047 MST1RQ04912 1400 aa28.68■■■□□ 2.18
MSGN1-201ENST00000281047 ROBO2Q9HCK4 1378 aa28.66■■■□□ 2.18
MSGN1-201ENST00000281047 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
MSGN1-201ENST00000281047 IFT172Q9UG01 1749 aa28.64■■■□□ 2.18
MSGN1-201ENST00000281047 ASXL1Q8IXJ9 1541 aa28.64■■■□□ 2.17
MSGN1-201ENST00000281047 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
MSGN1-201ENST00000281047 HRCP23327 699 aa28.59■■■□□ 2.17
MSGN1-201ENST00000281047 RGS17Q9UGC6 210 aaPredicted RBP28.59■■■□□ 2.17
MSGN1-201ENST00000281047 SPATA31A6Q5VVP1 1343 aa28.59■■■□□ 2.17
MSGN1-201ENST00000281047 C1orf167Q5SNV9 1468 aa28.56■■■□□ 2.16
MSGN1-201ENST00000281047 LRPPRCP42704 1394 aaKnown RBP28.55■■■□□ 2.16
MSGN1-201ENST00000281047 TECPR2O15040 1411 aa28.54■■■□□ 2.16
MSGN1-201ENST00000281047 STK26Q9P289 416 aa28.54■■■□□ 2.16
MSGN1-201ENST00000281047 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
MSGN1-201ENST00000281047 NHSL1Q5SYE7 1610 aa28.54■■■□□ 2.16
MSGN1-201ENST00000281047 MYOM2P54296 1465 aa28.53■■■□□ 2.16
MSGN1-201ENST00000281047 ABCC11Q96J66 1382 aa28.51■■■□□ 2.16
MSGN1-201ENST00000281047 TMEM132EQ6IEE7 984 aa28.51■■■□□ 2.15
MSGN1-201ENST00000281047 NRXN1Q9ULB1 1477 aa28.51■■■□□ 2.15
MSGN1-201ENST00000281047 LRRC59Q96AG4 307 aaKnown RBP28.5■■■□□ 2.15
MSGN1-201ENST00000281047 MEX3CQ5U5Q3 659 aaKnown RBP28.49■■■□□ 2.15
MSGN1-201ENST00000281047 C14orf93Q9H972 538 aaKnown RBP28.49■■■□□ 2.15
MSGN1-201ENST00000281047 CDC42BPGQ6DT37 1551 aa28.49■■■□□ 2.15
MSGN1-201ENST00000281047 YTHDC2Q9H6S0 1430 aaKnown RBP28.48■■■□□ 2.15
MSGN1-201ENST00000281047 LRP6O75581 1613 aa28.47■■■□□ 2.15
MSGN1-201ENST00000281047 KNDC1Q76NI1 1749 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms