RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
SLC13A3-201ENST00000279027 TTC37Q6PGP7 1564 aa15.42■□□□□ 0.06
SLC13A3-201ENST00000279027 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
SLC13A3-201ENST00000279027 BCORL1Q5H9F3 1711 aa15.42■□□□□ 0.06
SLC13A3-201ENST00000279027 PDE4AP27815 886 aa15.42■□□□□ 0.06
SLC13A3-201ENST00000279027 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
SLC13A3-201ENST00000279027 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
SLC13A3-201ENST00000279027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.063e-7■■□□□ 14.3
SLC13A3-201ENST00000279027 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
SLC13A3-201ENST00000279027 ABCC2Q92887 1545 aa15.41■□□□□ 0.06
SLC13A3-201ENST00000279027 BCAR3O75815 825 aa15.4■□□□□ 0.06
SLC13A3-201ENST00000279027 ARHGEF12Q9NZN5 1544 aa15.4■□□□□ 0.06
SLC13A3-201ENST00000279027 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
SLC13A3-201ENST00000279027 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
SLC13A3-201ENST00000279027 MTHFSP49914 203 aa15.39■□□□□ 0.05
SLC13A3-201ENST00000279027 COG6Q9Y2V7 657 aa15.39■□□□□ 0.05
SLC13A3-201ENST00000279027 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
SLC13A3-201ENST00000279027 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
SLC13A3-201ENST00000279027 CHD1O14646 1710 aa15.38■□□□□ 0.05
SLC13A3-201ENST00000279027 IPO9Q96P70 1041 aaKnown RBP15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 KDM5CP41229 1560 aa15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
SLC13A3-201ENST00000279027 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
SLC13A3-201ENST00000279027 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
SLC13A3-201ENST00000279027 CFAP65Q6ZU64 1925 aaKnown RBP15.35■□□□□ 0.05
SLC13A3-201ENST00000279027 ASXL2Q76L83 1435 aa15.35■□□□□ 0.05
SLC13A3-201ENST00000279027 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
SLC13A3-201ENST00000279027 NOS1P29475 1434 aa15.33■□□□□ 0.05
SLC13A3-201ENST00000279027 FBXO31Q5XUX0 539 aaPredicted RBP15.33■□□□□ 0.04
SLC13A3-201ENST00000279027 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
SLC13A3-201ENST00000279027 EVC2Q86UK5 1308 aa15.33■□□□□ 0.04
SLC13A3-201ENST00000279027 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
SLC13A3-201ENST00000279027 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
SLC13A3-201ENST00000279027 ARHGEF5Q12774 1597 aa15.32■□□□□ 0.04
SLC13A3-201ENST00000279027 IDI1Q13907 227 aa15.31■□□□□ 0.04
SLC13A3-201ENST00000279027 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
SLC13A3-201ENST00000279027 LRPPRCP42704 1394 aaKnown RBP15.31■□□□□ 0.04
SLC13A3-201ENST00000279027 E9PSI1 815 aa15.31■□□□□ 0.04
SLC13A3-201ENST00000279027 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
SLC13A3-201ENST00000279027 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 SCAF11Q99590 1463 aaKnown RBP15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 CDC42BPBQ9Y5S2 1711 aa15.3■□□□□ 0.04
SLC13A3-201ENST00000279027 FBLN1P23142 703 aa15.29■□□□□ 0.04
SLC13A3-201ENST00000279027 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
SLC13A3-201ENST00000279027 ARXQ96QS3 562 aa15.29■□□□□ 0.04
SLC13A3-201ENST00000279027 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
SLC13A3-201ENST00000279027 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
SLC13A3-201ENST00000279027 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
SLC13A3-201ENST00000279027 NSD3Q9BZ95 1437 aa15.28■□□□□ 0.04
SLC13A3-201ENST00000279027 UGGT1Q9NYU2 1555 aa15.27■□□□□ 0.04
SLC13A3-201ENST00000279027 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
SLC13A3-201ENST00000279027 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.03
SLC13A3-201ENST00000279027 CROCC2H7BZ55 1655 aa15.27■□□□□ 0.03
SLC13A3-201ENST00000279027 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.03
SLC13A3-201ENST00000279027 SMC4Q9NTJ3 1288 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 GPRASP1Q5JY77 1395 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
SLC13A3-201ENST00000279027 ZBTB7CA1YPR0 619 aa15.25■□□□□ 0.03
SLC13A3-201ENST00000279027 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
SLC13A3-201ENST00000279027 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 HMOX1P09601 288 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
SLC13A3-201ENST00000279027 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
SLC13A3-201ENST00000279027 MAST1Q9Y2H9 1570 aa15.23■□□□□ 0.03
SLC13A3-201ENST00000279027 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
SLC13A3-201ENST00000279027 UPF2Q9HAU5 1272 aaKnown RBP15.23■□□□□ 0.03
SLC13A3-201ENST00000279027 ATP10AO60312 1499 aa15.22■□□□□ 0.03
SLC13A3-201ENST00000279027 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
SLC13A3-201ENST00000279027 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
SLC13A3-201ENST00000279027 MYH16Q9H6N6 1097 aa15.21■□□□□ 0.03
SLC13A3-201ENST00000279027 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.03
SLC13A3-201ENST00000279027 RNF123Q5XPI4 1314 aa15.21■□□□□ 0.02
SLC13A3-201ENST00000279027 RIPK4P57078 832 aa15.21■□□□□ 0.02
SLC13A3-201ENST00000279027 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
SLC13A3-201ENST00000279027 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
SLC13A3-201ENST00000279027 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
SLC13A3-201ENST00000279027 ATP7AQ04656 1500 aa15.19■□□□□ 0.02
SLC13A3-201ENST00000279027 SLKQ9H2G2 1235 aaPredicted RBP15.18■□□□□ 0.02
SLC13A3-201ENST00000279027 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
SLC13A3-201ENST00000279027 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
SLC13A3-201ENST00000279027 ABCC1P33527 1531 aa15.18■□□□□ 0.02
SLC13A3-201ENST00000279027 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
SLC13A3-201ENST00000279027 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
SLC13A3-201ENST00000279027 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms