RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
USP31-201ENST00000219689 CAGE1Q8TC20 777 aa13.44□□□□□ -0.26
USP31-201ENST00000219689 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
USP31-201ENST00000219689 USP8P40818 1118 aa13.44□□□□□ -0.26
USP31-201ENST00000219689 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
USP31-201ENST00000219689 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
USP31-201ENST00000219689 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
USP31-201ENST00000219689 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
USP31-201ENST00000219689 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
USP31-201ENST00000219689 PDILTQ8N807 584 aa13.42□□□□□ -0.26
USP31-201ENST00000219689 TRIM5Q9C035 493 aa13.42□□□□□ -0.26
USP31-201ENST00000219689 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
USP31-201ENST00000219689 PCMTD1Q96MG8 357 aaPredicted RBP13.42□□□□□ -0.26
USP31-201ENST00000219689 IPO7O95373 1038 aaKnown RBP13.42□□□□□ -0.26
USP31-201ENST00000219689 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
USP31-201ENST00000219689 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
USP31-201ENST00000219689 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
USP31-201ENST00000219689 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
USP31-201ENST00000219689 FOSBP53539 338 aa13.4□□□□□ -0.26
USP31-201ENST00000219689 CT47B1P0C2W7 299 aaPredicted RBP13.4□□□□□ -0.26
USP31-201ENST00000219689 MYH10P35580 1976 aa13.4□□□□□ -0.26
USP31-201ENST00000219689 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
USP31-201ENST00000219689 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
USP31-201ENST00000219689 POGKQ9P215 609 aa13.39□□□□□ -0.27
USP31-201ENST00000219689 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
USP31-201ENST00000219689 NAP1L1P55209 391 aaKnown RBP13.39□□□□□ -0.27
USP31-201ENST00000219689 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
USP31-201ENST00000219689 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
USP31-201ENST00000219689 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
USP31-201ENST00000219689 FAM193AP78312 1265 aa13.38□□□□□ -0.27
USP31-201ENST00000219689 PRPF40AO75400 957 aaKnown RBP13.38□□□□□ -0.27
USP31-201ENST00000219689 SMC2O95347 1197 aa13.38□□□□□ -0.27
USP31-201ENST00000219689 VGLL3A8MV65 326 aa13.37□□□□□ -0.27
USP31-201ENST00000219689 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
USP31-201ENST00000219689 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP31-201ENST00000219689 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
USP31-201ENST00000219689 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
USP31-201ENST00000219689 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
USP31-201ENST00000219689 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
USP31-201ENST00000219689 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
USP31-201ENST00000219689 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
USP31-201ENST00000219689 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
USP31-201ENST00000219689 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
USP31-201ENST00000219689 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
USP31-201ENST00000219689 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
USP31-201ENST00000219689 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
USP31-201ENST00000219689 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
USP31-201ENST00000219689 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP31-201ENST00000219689 NEFHP12036 1026 aa13.33□□□□□ -0.27
USP31-201ENST00000219689 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
USP31-201ENST00000219689 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
USP31-201ENST00000219689 REC8O95072 547 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
USP31-201ENST00000219689 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 ABCC9O60706 1549 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
USP31-201ENST00000219689 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
USP31-201ENST00000219689 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
USP31-201ENST00000219689 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
USP31-201ENST00000219689 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
USP31-201ENST00000219689 CCP110O43303 1012 aa13.32□□□□□ -0.28
USP31-201ENST00000219689 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
USP31-201ENST00000219689 DYNC1I1O14576 645 aa13.31□□□□□ -0.28
USP31-201ENST00000219689 MCM4P33991 863 aa13.31□□□□□ -0.28
USP31-201ENST00000219689 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
USP31-201ENST00000219689 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
USP31-201ENST00000219689 MBD3O95983 291 aa13.3□□□□□ -0.28
USP31-201ENST00000219689 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
USP31-201ENST00000219689 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
USP31-201ENST00000219689 NOL10Q9BSC4 688 aaKnown RBP13.3□□□□□ -0.28
USP31-201ENST00000219689 SOX12O15370 315 aa13.3□□□□□ -0.28
USP31-201ENST00000219689 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
USP31-201ENST00000219689 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
USP31-201ENST00000219689 GOLGA6L10A6NI86 522 aa13.29□□□□□ -0.28
USP31-201ENST00000219689 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
USP31-201ENST00000219689 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
USP31-201ENST00000219689 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
USP31-201ENST00000219689 CCDC9Q9Y3X0 531 aaKnown RBP13.28□□□□□ -0.28
USP31-201ENST00000219689 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
USP31-201ENST00000219689 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
USP31-201ENST00000219689 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
USP31-201ENST00000219689 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.29
USP31-201ENST00000219689 ODF2Q5BJF6 829 aa13.26□□□□□ -0.29
USP31-201ENST00000219689 ZKSCAN2Q63HK3 967 aa13.26□□□□□ -0.29
USP31-201ENST00000219689 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
USP31-201ENST00000219689 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
USP31-201ENST00000219689 LNPKQ9C0E8 428 aa13.26□□□□□ -0.29
USP31-201ENST00000219689 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
USP31-201ENST00000219689 MNAT1P51948 309 aa13.25□□□□□ -0.29
USP31-201ENST00000219689 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
USP31-201ENST00000219689 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
USP31-201ENST00000219689 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
USP31-201ENST00000219689 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
USP31-201ENST00000219689 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
USP31-201ENST00000219689 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
USP31-201ENST00000219689 SYCE3A1L190 88 aa13.25□□□□□ -0.29
USP31-201ENST00000219689 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
USP31-201ENST00000219689 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms