RNA–Protein interactions for RNA: ENST00000219479.6

NME4-201, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME4, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-201ENST00000219479 RRBP1Q9P2E9 1410 aaKnown RBP33.04■■■□□ 2.88
NME4-201ENST00000219479 RPRD2Q5VT52 1461 aaKnown RBP33.04■■■□□ 2.88
NME4-201ENST00000219479 SLC52A1Q9NWF4 448 aa33.02■■■□□ 2.88
NME4-201ENST00000219479 ROBO1Q9Y6N7 1651 aa33.01■■■□□ 2.88
NME4-201ENST00000219479 GCC2Q8IWJ2 1684 aa33.01■■■□□ 2.87
NME4-201ENST00000219479 NKTRP30414 1462 aaKnown RBP33■■■□□ 2.87
NME4-201ENST00000219479 UNC13BO14795 1591 aa32.99■■■□□ 2.87
NME4-201ENST00000219479 PROSER2Q86WR7 435 aaPredicted RBP32.97■■■□□ 2.87
NME4-201ENST00000219479 RBM33Q96EV2 1170 aaKnown RBP32.97■■■□□ 2.87
NME4-201ENST00000219479 ZFYVE9O95405 1425 aa32.96■■■□□ 2.87
NME4-201ENST00000219479 RGS17Q9UGC6 210 aaPredicted RBP32.95■■■□□ 2.87
NME4-201ENST00000219479 TMEM131LA2VDJ0 1609 aa32.95■■■□□ 2.86
NME4-201ENST00000219479 NUP155O75694 1391 aa32.95■■■□□ 2.86
NME4-201ENST00000219479 CHD2O14647 1828 aaKnown RBP32.93■■■□□ 2.86
NME4-201ENST00000219479 BCANQ96GW7 911 aa32.9■■■□□ 2.86
NME4-201ENST00000219479 PLEKHG1Q9ULL1 1385 aa32.9■■■□□ 2.86
NME4-201ENST00000219479 RIMS2Q9UQ26 1411 aa32.89■■■□□ 2.86
NME4-201ENST00000219479 E9PCH4 1651 aa32.88■■■□□ 2.85
NME4-201ENST00000219479 MSH6P52701 1360 aa32.86■■■□□ 2.85
NME4-201ENST00000219479 IQGAP3Q86VI3 1631 aa32.86■■■□□ 2.85
NME4-201ENST00000219479 PPP1R15AO75807 674 aaPredicted RBP32.82■■■□□ 2.84
NME4-201ENST00000219479 PHLPP1O60346 1717 aa32.82■■■□□ 2.84
NME4-201ENST00000219479 NAIPQ13075 1403 aa32.78■■■□□ 2.84
NME4-201ENST00000219479 CHGAP10645 457 aaKnown RBP32.78■■■□□ 2.84
NME4-201ENST00000219479 HDGFP51858 240 aaKnown RBP32.78■■■□□ 2.84
NME4-201ENST00000219479 SLAIN2Q9P270 581 aa32.76■■■□□ 2.83
NME4-201ENST00000219479 ADAMTS13Q76LX8 1427 aa32.75■■■□□ 2.83
NME4-201ENST00000219479 DIP2AQ14689 1571 aa32.75■■■□□ 2.83
NME4-201ENST00000219479 POTEAQ6S8J7 498 aa32.74■■■□□ 2.83
NME4-201ENST00000219479 TBX22Q9Y458 520 aa32.74■■■□□ 2.83
NME4-201ENST00000219479 HFM1A2PYH4 1435 aa32.73■■■□□ 2.83
NME4-201ENST00000219479 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.72■■■□□ 2.83
NME4-201ENST00000219479 COL16A1Q07092 1604 aaPredicted RBP32.71■■■□□ 2.83
NME4-201ENST00000219479 NCOA3Q9Y6Q9 1424 aa32.7■■■□□ 2.83
NME4-201ENST00000219479 NUTM2DQ5VT03 806 aaPredicted RBP32.7■■■□□ 2.83
NME4-201ENST00000219479 TRIM52Q96A61 297 aa32.69■■■□□ 2.82
NME4-201ENST00000219479 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.68■■■□□ 2.82
NME4-201ENST00000219479 JCADQ9P266 1359 aa32.68■■■□□ 2.82
NME4-201ENST00000219479 PIK3R4Q99570 1358 aa32.65■■■□□ 2.82
NME4-201ENST00000219479 TRPM2O94759 1503 aa32.63■■■□□ 2.81
NME4-201ENST00000219479 C14orf37Q86TY3 774 aa32.62■■■□□ 2.81
NME4-201ENST00000219479 SETD1AO15047 1707 aaKnown RBP32.6■■■□□ 2.81
NME4-201ENST00000219479 SPHKAPQ2M3C7 1700 aa32.6■■■□□ 2.81
NME4-201ENST00000219479 AHDC1Q5TGY3 1603 aaPredicted RBP32.59■■■□□ 2.81
NME4-201ENST00000219479 PTPRUQ92729 1446 aa32.59■■■□□ 2.81
NME4-201ENST00000219479 NRXN3Q9Y4C0 1643 aa32.59■■■□□ 2.81
NME4-201ENST00000219479 LRP6O75581 1613 aa32.56■■■□□ 2.8
NME4-201ENST00000219479 CADPS2Q86UW7 1296 aa32.56■■■□□ 2.8
NME4-201ENST00000219479 SLC4A1APQ9BWU0 796 aaKnown RBP32.55■■■□□ 2.8
NME4-201ENST00000219479 C19orf44Q9H6X5 657 aa32.55■■■□□ 2.8
NME4-201ENST00000219479 XRN1Q8IZH2 1706 aaKnown RBP32.54■■■□□ 2.8
NME4-201ENST00000219479 SHPRHQ149N8 1683 aa32.54■■■□□ 2.8
NME4-201ENST00000219479 ZNF326Q5BKZ1 582 aaKnown RBP32.53■■■□□ 2.8
NME4-201ENST00000219479 SETBP1Q9Y6X0 1596 aa32.53■■■□□ 2.8
NME4-201ENST00000219479 ATF3P18847 181 aa32.52■■■□□ 2.8
NME4-201ENST00000219479 AMOTL2Q9Y2J4 779 aa32.52■■■□□ 2.8
NME4-201ENST00000219479 SPATA31A6Q5VVP1 1343 aa32.5■■■□□ 2.79
NME4-201ENST00000219479 DCCP43146 1447 aa32.46■■■□□ 2.79
NME4-201ENST00000219479 BRINP3Q76B58 766 aa32.44■■■□□ 2.78
NME4-201ENST00000219479 CLTCL1P53675 1640 aa32.44■■■□□ 2.78
NME4-201ENST00000219479 ASXL1Q8IXJ9 1541 aa32.41■■■□□ 2.78
NME4-201ENST00000219479 MEX3CQ5U5Q3 659 aaKnown RBP32.41■■■□□ 2.78
NME4-201ENST00000219479 METP08581 1390 aa32.4■■■□□ 2.78
NME4-201ENST00000219479 NEXMIFQ5QGS0 1516 aa32.4■■■□□ 2.78
NME4-201ENST00000219479 NHSL1Q5SYE7 1610 aa32.39■■■□□ 2.78
NME4-201ENST00000219479 MST1RQ04912 1400 aa32.38■■■□□ 2.77
NME4-201ENST00000219479 ACIN1Q9UKV3 1341 aaKnown RBP32.36■■■□□ 2.77
NME4-201ENST00000219479 KIF1BO60333 1816 aa32.36■■■□□ 2.77
NME4-201ENST00000219479 NALCNQ8IZF0 1738 aa32.35■■■□□ 2.77
NME4-201ENST00000219479 ZNF772Q68DY9 489 aaPredicted RBP32.35■■■□□ 2.77
NME4-201ENST00000219479 SETD5Q9C0A6 1442 aa32.34■■■□□ 2.77
NME4-201ENST00000219479 FOXD1Q16676 465 aa32.34■■■□□ 2.77
NME4-201ENST00000219479 MPHOSPH9Q99550 1183 aa32.33■■■□□ 2.77
NME4-201ENST00000219479 ADGRL3Q9HAR2 1447 aa32.32■■■□□ 2.76
NME4-201ENST00000219479 NUTM2BA6NNL0 878 aaPredicted RBP32.27■■■□□ 2.76
NME4-201ENST00000219479 NUTM2EB1AL46 878 aaPredicted RBP32.27■■■□□ 2.76
NME4-201ENST00000219479 NUTM2AQ8IVF1 878 aaPredicted RBP32.27■■■□□ 2.76
NME4-201ENST00000219479 CCDC144AA2RUR9 1427 aa32.26■■■□□ 2.75
NME4-201ENST00000219479 VGFO15240 615 aaPredicted RBP32.24■■■□□ 2.75
NME4-201ENST00000219479 RPGRIP1LQ68CZ1 1315 aa32.24■■■□□ 2.75
NME4-201ENST00000219479 RAB3GAP2Q9H2M9 1393 aa32.22■■■□□ 2.75
NME4-201ENST00000219479 DDX17Q92841 729 aaKnown RBP32.2■■■□□ 2.75
NME4-201ENST00000219479 AFF2P51816 1311 aa32.2■■■□□ 2.74
NME4-201ENST00000219479 PTCH1Q13635 1447 aa32.19■■■□□ 2.74
NME4-201ENST00000219479 RXRBP28702 533 aa32.19■■■□□ 2.74
NME4-201ENST00000219479 LRRC59Q96AG4 307 aaKnown RBP32.19■■■□□ 2.74
NME4-201ENST00000219479 PNPLA6Q8IY17 1366 aa32.19■■■□□ 2.74
NME4-201ENST00000219479 UPF1Q92900 1129 aaKnown RBP eCLIP32.18■■■□□ 2.74
NME4-201ENST00000219479 CDK12Q9NYV4 1490 aaPredicted RBP32.17■■■□□ 2.74
NME4-201ENST00000219479 LAMC1P11047 1609 aa32.17■■■□□ 2.74
NME4-201ENST00000219479 C1orf167Q5SNV9 1468 aa32.16■■■□□ 2.74
NME4-201ENST00000219479 PPLO60437 1756 aa32.14■■■□□ 2.74
NME4-201ENST00000219479 RGL3Q3MIN7 710 aa32.14■■■□□ 2.74
NME4-201ENST00000219479 ROBO2Q9HCK4 1378 aa32.13■■■□□ 2.73
NME4-201ENST00000219479 PRAG1Q86YV5 1406 aa32.12■■■□□ 2.73
NME4-201ENST00000219479 C8orf37Q96NL8 207 aa32.09■■■□□ 2.73
NME4-201ENST00000219479 RGS12O14924 1447 aa32.05■■■□□ 2.72
NME4-201ENST00000219479 SPATA31E1Q6ZUB1 1445 aa32.05■■■□□ 2.72
NME4-201ENST00000219479 ANKRD30BQ9BXX2 1392 aa32.04■■■□□ 2.72
NME4-201ENST00000219479 ORAI2Q96SN7 254 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms