RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
NME3-201ENST00000219302 BCANQ96GW7 911 aa24.37■■□□□ 1.49
NME3-201ENST00000219302 PLEKHG1Q9ULL1 1385 aa24.37■■□□□ 1.49
NME3-201ENST00000219302 HDGFP51858 240 aaKnown RBP24.36■■□□□ 1.49
NME3-201ENST00000219302 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
NME3-201ENST00000219302 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
NME3-201ENST00000219302 RIMS2Q9UQ26 1411 aa24.35■■□□□ 1.49
NME3-201ENST00000219302 TBX22Q9Y458 520 aa24.33■■□□□ 1.49
NME3-201ENST00000219302 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
NME3-201ENST00000219302 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
NME3-201ENST00000219302 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
NME3-201ENST00000219302 MYO5BQ9ULV0 1848 aa24.31■■□□□ 1.48
NME3-201ENST00000219302 MSH6P52701 1360 aa24.3■■□□□ 1.48
NME3-201ENST00000219302 UNC13BO14795 1591 aa24.3■■□□□ 1.48
NME3-201ENST00000219302 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
NME3-201ENST00000219302 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
NME3-201ENST00000219302 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
NME3-201ENST00000219302 GCC2Q8IWJ2 1684 aa24.28■■□□□ 1.48
NME3-201ENST00000219302 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
NME3-201ENST00000219302 CHGAP10645 457 aaKnown RBP24.27■■□□□ 1.48
NME3-201ENST00000219302 ADAMTS13Q76LX8 1427 aa24.26■■□□□ 1.47
NME3-201ENST00000219302 E9PCH4 1651 aa24.25■■□□□ 1.47
NME3-201ENST00000219302 NUTM2DQ5VT03 806 aaPredicted RBP24.25■■□□□ 1.47
NME3-201ENST00000219302 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
NME3-201ENST00000219302 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
NME3-201ENST00000219302 NUP155O75694 1391 aa24.22■■□□□ 1.47
NME3-201ENST00000219302 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
NME3-201ENST00000219302 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
NME3-201ENST00000219302 ITGAEP38570 1179 aa24.17■■□□□ 1.46
NME3-201ENST00000219302 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
NME3-201ENST00000219302 JCADQ9P266 1359 aa24.16■■□□□ 1.46
NME3-201ENST00000219302 PHLPP1O60346 1717 aa24.14■■□□□ 1.45
NME3-201ENST00000219302 DIP2AQ14689 1571 aa24.14■■□□□ 1.45
NME3-201ENST00000219302 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
NME3-201ENST00000219302 CADPS2Q86UW7 1296 aa24.14■■□□□ 1.45
NME3-201ENST00000219302 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.45
NME3-201ENST00000219302 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
NME3-201ENST00000219302 PPARGC1BQ86YN6 1023 aaKnown RBP24.13■■□□□ 1.45
NME3-201ENST00000219302 ATF3P18847 181 aa24.1■■□□□ 1.45
NME3-201ENST00000219302 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
NME3-201ENST00000219302 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
NME3-201ENST00000219302 TRPM2O94759 1503 aa24.08■■□□□ 1.45
NME3-201ENST00000219302 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
NME3-201ENST00000219302 BRINP3Q76B58 766 aa24.04■■□□□ 1.44
NME3-201ENST00000219302 AHDC1Q5TGY3 1603 aaPredicted RBP24.03■■□□□ 1.44
NME3-201ENST00000219302 NRXN3Q9Y4C0 1643 aa24.03■■□□□ 1.44
NME3-201ENST00000219302 LRP6O75581 1613 aa24.02■■□□□ 1.44
NME3-201ENST00000219302 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
NME3-201ENST00000219302 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
NME3-201ENST00000219302 METP08581 1390 aa24.02■■□□□ 1.44
NME3-201ENST00000219302 SPHKAPQ2M3C7 1700 aa24■■□□□ 1.43
NME3-201ENST00000219302 DCCP43146 1447 aa24■■□□□ 1.43
NME3-201ENST00000219302 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
NME3-201ENST00000219302 MST1RQ04912 1400 aa23.95■■□□□ 1.42
NME3-201ENST00000219302 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.42
NME3-201ENST00000219302 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.42
NME3-201ENST00000219302 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
NME3-201ENST00000219302 NAIPQ13075 1403 aa23.94■■□□□ 1.42
NME3-201ENST00000219302 SHPRHQ149N8 1683 aa23.94■■□□□ 1.42
NME3-201ENST00000219302 CLTCL1P53675 1640 aa23.93■■□□□ 1.42
NME3-201ENST00000219302 NEXMIFQ5QGS0 1516 aa23.93■■□□□ 1.42
NME3-201ENST00000219302 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
NME3-201ENST00000219302 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
NME3-201ENST00000219302 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.41
NME3-201ENST00000219302 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.41
NME3-201ENST00000219302 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.41
NME3-201ENST00000219302 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
NME3-201ENST00000219302 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
NME3-201ENST00000219302 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
NME3-201ENST00000219302 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
NME3-201ENST00000219302 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
NME3-201ENST00000219302 RXRBP28702 533 aa23.84■■□□□ 1.41
NME3-201ENST00000219302 TRIM52Q96A61 297 aa23.84■■□□□ 1.41
NME3-201ENST00000219302 NHSL1Q5SYE7 1610 aa23.84■■□□□ 1.41
NME3-201ENST00000219302 KIF1BO60333 1816 aa23.83■■□□□ 1.41
NME3-201ENST00000219302 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.41
NME3-201ENST00000219302 RPGRIP1LQ68CZ1 1315 aa23.83■■□□□ 1.4
NME3-201ENST00000219302 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
NME3-201ENST00000219302 AFF2P51816 1311 aa23.82■■□□□ 1.4
NME3-201ENST00000219302 ROBO2Q9HCK4 1378 aa23.81■■□□□ 1.4
NME3-201ENST00000219302 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
NME3-201ENST00000219302 PNPLA6Q8IY17 1366 aa23.8■■□□□ 1.4
NME3-201ENST00000219302 NALCNQ8IZF0 1738 aa23.8■■□□□ 1.4
NME3-201ENST00000219302 SLC4A1APQ9BWU0 796 aaKnown RBP23.8■■□□□ 1.4
NME3-201ENST00000219302 PTCH1Q13635 1447 aa23.79■■□□□ 1.4
NME3-201ENST00000219302 PRAG1Q86YV5 1406 aa23.77■■□□□ 1.4
NME3-201ENST00000219302 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
NME3-201ENST00000219302 CDK12Q9NYV4 1490 aaPredicted RBP23.76■■□□□ 1.39
NME3-201ENST00000219302 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
NME3-201ENST00000219302 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
NME3-201ENST00000219302 QTRT2Q9H974 415 aaKnown RBP23.73■■□□□ 1.39
NME3-201ENST00000219302 LAMC1P11047 1609 aa23.72■■□□□ 1.39
NME3-201ENST00000219302 FOXD1Q16676 465 aa23.71■■□□□ 1.39
NME3-201ENST00000219302 RBM6P78332 1123 aaKnown RBP23.7■■□□□ 1.38
NME3-201ENST00000219302 PPLO60437 1756 aa23.69■■□□□ 1.38
NME3-201ENST00000219302 ADGRF5Q8IZF2 1346 aa23.68■■□□□ 1.38
NME3-201ENST00000219302 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
NME3-201ENST00000219302 NGLY1Q96IV0 654 aa23.68■■□□□ 1.38
NME3-201ENST00000219302 RGS12O14924 1447 aa23.64■■□□□ 1.37
NME3-201ENST00000219302 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms