RNA–Protein interactions for RNA: ENSMUST00000039174.10

Prdm1-201, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Prdm1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-201ENSMUST00000039174 Usp40Q8BWR4 1235 aa13.97□□□□□ -0.17
Prdm1-201ENSMUST00000039174 BcanQ61361 883 aa13.97□□□□□ -0.17
Prdm1-201ENSMUST00000039174 Fbxo2Q80UW2 297 aa13.97□□□□□ -0.17
Prdm1-201ENSMUST00000039174 Nolc1E9Q5C9 702 aaKnown RBP13.96□□□□□ -0.17
Prdm1-201ENSMUST00000039174 Rab11fip3Q8CHD8 1047 aa13.96□□□□□ -0.17
Prdm1-201ENSMUST00000039174 Hdgfl1Q2VPR5 283 aa13.96□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Smc3Q9CW03 1217 aaKnown RBP13.96□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Q9D2X8 372 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Cep162Q6ZQ06 1403 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Kif7B7ZNG0 1348 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Necab1Q8BG18 352 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Arhgap35Q91YM2 1499 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Hook1Q8BIL5 728 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Hnrnpul1Q8VDM6 859 aaKnown RBP13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Fyb1O35601 819 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Taf3Q5HZG4 932 aa13.95□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Gripap1Q8VD04 806 aa13.94□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Rufy1Q8BIJ7 712 aa13.94□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Dhx57Q6P5D3 1388 aaKnown RBP13.94□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Cfdp1O88271 295 aaKnown RBP13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Nap1l1P28656 391 aaKnown RBP13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Fam184bQ0KK56 942 aa13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Znhit6Q3UFB2 460 aaKnown RBP13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Ccdc96Q9CR92 584 aa13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 UvssaQ9D479 717 aa13.93□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Esx1O88933 382 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Kif4P33174 1231 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Zrsr2Q62377 462 aaKnown RBP13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Trim29Q8R2Q0 587 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Rock1P70335 1354 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Dixdc1Q80Y83 711 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 PhaxQ9JJT9 385 aaKnown RBP13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Usp16Q99LG0 825 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Ralbp1Q62172 648 aa13.92□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Gtf2f1Q3THK3 508 aaKnown RBP13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Gpatch3Q8BIY1 525 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Ric3Q8BPM6 367 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Pdcl3Q8BVF2 240 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Mad1l1Q9WTX8 717 aaKnown RBP13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Plekhh2Q8C115 1491 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Baz1bQ9Z277 1479 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Sycp1Q62209 993 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Ak7Q9D2H2 614 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Me1P06801 572 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 NexnQ7TPW1 607 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Nol12Q8BG17 217 aa13.91□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Bcl2l13P59017 434 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Rbm28Q8CGC6 750 aaKnown RBP13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Klf15Q9EPW2 415 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Gcom1E9PZ54 550 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 MyzapQ3UIJ9 466 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Sytl4Q9R0Q1 673 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Abl1P00520 1123 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 HmmrQ00547 794 aaKnown RBP13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 IbspQ61711 324 aa13.9□□□□□ -0.18
Prdm1-201ENSMUST00000039174 Erc2Q6PH08 957 aa13.89□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Hmox1P14901 289 aa13.89□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Commd10Q8JZY2 202 aa13.89□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Mre11Q61216 706 aa13.89□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Trim58Q5NCC9 485 aa13.88□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Podxl2Q8CAE9 603 aa13.88□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Baz1aO88379 1555 aa13.88□□□□□ -0.19
Prdm1-201ENSMUST00000039174 PogkQ80TC5 607 aa13.88□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Cfap99A0A140LIX9 648 aa13.88□□□□□ -0.19
Prdm1-201ENSMUST00000039174 AcrbpQ3V140 540 aa13.87□□□□□ -0.19
Prdm1-201ENSMUST00000039174 NaspQ99MD9 773 aaKnown RBP13.87□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Nectin2P32507 530 aa13.87□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Hmgn5Q9JL35 406 aa13.87□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Rbm5Q91YE7 815 aaKnown RBP13.86□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Ppp4r3bQ922R5 820 aa13.86□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Lrrcc1Q69ZB0 1026 aa13.86□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Usp48Q3V0C5 1052 aa13.86□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Rsph6aQ8CDR2 708 aa13.85□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Sirt1Q923E4 737 aa13.85□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Usp47Q8BY87 1376 aa13.85□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Gsdma3Q5Y4Y6 464 aa13.85□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Gnai1B2RSH2 354 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Cep89Q9CZX2 791 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Gnai3Q9DC51 354 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Zscan10Q3URR7 782 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Pnmal2G3X9N3 661 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Kif3aP28741 701 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Rnf214Q8BFU3 668 aaKnown RBP13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Nutm1Q8BHP2 1126 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 TatQ8QZR1 454 aa13.84□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Kif16bB1AVY7 1312 aa13.83□□□□□ -0.19
Prdm1-201ENSMUST00000039174 Kif3cO35066 796 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Gnl3lQ6PGG6 577 aaKnown RBP13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Pip4k2bQ80XI4 416 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Ccdc88bQ4QRL3 1481 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Ccnb3Q810T2 1396 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Gm10471E9Q1C7 252 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Ubxn4Q8VCH8 506 aa13.83□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Rabep1O35551 862 aa13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Ttll5Q8CHB8 1328 aa13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Agtpbp1Q641K1 1218 aa13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Mphosph10Q810V0 681 aaKnown RBP13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Sv2bQ8BG39 683 aa13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 KarsQ99MN1 595 aaKnown RBP13.82□□□□□ -0.2
Prdm1-201ENSMUST00000039174 Cchcr1Q8K2I2 770 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms