RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SIA1Q12212 622 aa-3.57□□□□□ -2.98
snR40snR40 IPP1P00817 287 aaKnown RBP-3.58□□□□□ -2.98
snR40snR40 YLL053CP0CD98 152 aa-3.58□□□□□ -2.98
snR40snR40 MRPL17P36528 281 aa-3.58□□□□□ -2.98
snR40snR40 THG1P53215 237 aaKnown RBP-3.58□□□□□ -2.98
snR40snR40 VOA1P53262 265 aa-3.58□□□□□ -2.98
snR40snR40 IRC23Q08416 157 aa-3.58□□□□□ -2.98
snR40snR40 PGA3Q12746 312 aaKnown RBP-3.58□□□□□ -2.98
snR40snR40 REP2P03872 296 aa-3.59□□□□□ -2.98
snR40snR40 SWC5P38326 303 aa-3.59□□□□□ -2.98
snR40snR40 PRM8P53174 237 aa-3.59□□□□□ -2.98
snR40snR40 RTC4P53850 401 aa-3.59□□□□□ -2.98
snR40snR40 PRO2P54885 456 aaKnown RBP-3.59□□□□□ -2.98
snR40snR40 YDR124WQ04608 324 aa-3.59□□□□□ -2.98
snR40snR40 RNH202Q05635 350 aa-3.59□□□□□ -2.98
snR40snR40 BRX1Q08235 291 aaKnown RBP-3.59□□□□□ -2.98
snR40snR40 PST2Q12335 198 aaKnown RBP-3.59□□□□□ -2.98
snR40snR40 POT1P27796 417 aaKnown RBP RIP-Chip data-3.6□□□□□ -2.99not detected
snR40snR40 ARO7P32178 256 aa-3.6□□□□□ -2.99
snR40snR40 MGM101P32787 269 aaKnown RBP-3.6□□□□□ -2.99
snR40snR40 MRPL24P36525 258 aaPredicted RBP-3.6□□□□□ -2.99
snR40snR40 YBR285WP38354 144 aa-3.6□□□□□ -2.99
snR40snR40 NUP84P52891 726 aa-3.6□□□□□ -2.99
snR40snR40 NBP35P52920 328 aa-3.6□□□□□ -2.99
snR40snR40 YLR194CQ05777 254 aa-3.6□□□□□ -2.99
snR40snR40 PRE1P22141 198 aaKnown RBP-3.61□□□□□ -2.99
snR40snR40 RPC37P36121 282 aa-3.61□□□□□ -2.99
snR40snR40 GVP36P40531 326 aaKnown RBP-3.61□□□□□ -2.99
snR40snR40 RMT2Q03305 412 aa-3.61□□□□□ -2.99
snR40snR40 YDR248CQ03786 193 aa-3.61□□□□□ -2.99
snR40snR40 YOR020W-AQ3E824 90 aa-3.61□□□□□ -2.99
snR40snR40 HTL1Q9URQ5 78 aa-3.61□□□□□ -2.99
snR40snR40 FUR1P18562 216 aaKnown RBP-3.62□□□□□ -2.99
snR40snR40 SGE1P33335 543 aa-3.62□□□□□ -2.99
snR40snR40 YBR063CP38083 404 aa-3.62□□□□□ -2.99
snR40snR40 INA22P40576 216 aa-3.62□□□□□ -2.99
snR40snR40 SWS2P53937 143 aa-3.62□□□□□ -2.99
snR40snR40 GET4Q12125 312 aa-3.62□□□□□ -2.99
snR40snR40 DYN1P36022 4092 aa-3.63□□□□□ -2.99
snR40snR40 RPL1AP0CX43 217 aaKnown RBP-3.63□□□□□ -2.99
snR40snR40 RPL1BP0CX44 217 aaKnown RBP-3.63□□□□□ -2.99
snR40snR40 IDH1P28834 360 aaKnown RBP RIP-Chip data-3.63□□□□□ -2.99not detected
snR40snR40 YKL063CP35725 167 aa-3.63□□□□□ -2.99
snR40snR40 DBP9Q06218 594 aaKnown RBP-3.63□□□□□ -2.99
snR40snR40 GPI12P23797 304 aa-3.64□□□□□ -2.99
snR40snR40 HOM6P31116 359 aaKnown RBP-3.64□□□□□ -2.99
snR40snR40 YBL010CP32788 280 aa-3.64□□□□□ -2.99
snR40snR40 MRPL40P36534 297 aa-3.64□□□□□ -2.99
snR40snR40 MNN9P39107 395 aaKnown RBP-3.64□□□□□ -2.99
snR40snR40 YGR168CP53293 376 aa-3.64□□□□□ -2.99
snR40snR40 SWP1Q02795 286 aa-3.64□□□□□ -2.99
snR40snR40 PBP4Q07362 185 aaKnown RBP-3.64□□□□□ -2.99
snR40snR40 DGK1Q12382 290 aa-3.64□□□□□ -2.99
snR40snR40 TSC3Q3E790 80 aa-3.64□□□□□ -2.99
snR40snR40 PMD1P32634 1753 aa-3.64□□□□□ -2.99
snR40snR40 MRH4P53166 561 aa-3.65□□□□□ -2.99
snR40snR40 GOT1Q03554 138 aa-3.65□□□□□ -2.99
snR40snR40 ATG16Q03818 150 aa-3.65□□□□□ -2.99
snR40snR40 YDR286CQ05530 114 aa-3.65□□□□□ -2.99
snR40snR40 GGA1Q06336 557 aa-3.65□□□□□ -2.99
snR40snR40 SYC1Q08553 188 aaPredicted RBP-3.65□□□□□ -2.99
snR40snR40 GIS3Q12418 502 aa-3.65□□□□□ -2.99
snR40snR40 MRP7P12687 371 aa-3.66□□□□□ -3
snR40snR40 APS1P35181 156 aa-3.66□□□□□ -3
snR40snR40 YKL162CP36052 402 aa-3.66□□□□□ -3
snR40snR40 YFR035CP43608 114 aa-3.66□□□□□ -3
snR40snR40 AIM25P47140 327 aa-3.66□□□□□ -3
snR40snR40 PML1Q07930 204 aaPredicted RBP-3.66□□□□□ -3
snR40snR40 SPO24Q3E752 67 aa-3.66□□□□□ -3
snR40snR40 COA6Q3E846 104 aa-3.66□□□□□ -3
snR40snR40 TIM9O74700 87 aa-3.67□□□□□ -3
snR40snR40 URA5P13298 226 aaKnown RBP-3.67□□□□□ -3
snR40snR40 CDC10P25342 322 aaKnown RBP-3.67□□□□□ -3
snR40snR40 RPA12P32529 125 aaKnown RBP-3.67□□□□□ -3
snR40snR40 YIA6P40556 373 aa-3.67□□□□□ -3
snR40snR40 YGL235WP53071 178 aa-3.67□□□□□ -3
snR40snR40 YNL010WP53981 241 aaKnown RBP-3.67□□□□□ -3
snR40snR40 LAP3Q01532 483 aaKnown RBP RIP-Chip data-3.67□□□□□ -3not detected
snR40snR40 YPL077CQ02831 240 aa-3.67□□□□□ -3
snR40snR40 VAC14Q06708 880 aa-3.67□□□□□ -3
snR40snR40 YFH1Q07540 174 aa-3.67□□□□□ -3
snR40snR40 RRT8Q08219 342 aa-3.67□□□□□ -3
snR40snR40 ALP1P38971 573 aa-3.68□□□□□ -3
snR40snR40 POR2P40478 281 aa-3.68□□□□□ -3
snR40snR40 ZIM17P42844 174 aa-3.68□□□□□ -3
snR40snR40 OM45P16547 393 aa-3.69□□□□□ -3
snR40snR40 SKG1P36169 355 aa-3.69□□□□□ -3
snR40snR40 CUP9P41817 306 aa-3.69□□□□□ -3
snR40snR40 LOH1P47055 219 aa-3.69□□□□□ -3
snR40snR40 HAM1P47119 197 aaKnown RBP-3.69□□□□□ -3
snR40snR40 YLR173WQ06247 608 aa-3.69□□□□□ -3
snR40snR40 STF2P16965 84 aa-3.7□□□□□ -3
snR40snR40 ICL1P28240 557 aaPredicted RBP-3.7□□□□□ -3
snR40snR40 NFU1P32860 256 aa-3.7□□□□□ -3
snR40snR40 YGR269WP40326 108 aa-3.7□□□□□ -3
snR40snR40 SNZ1Q03148 297 aa-3.7□□□□□ -3
snR40snR40 YML096WQ04489 525 aa-3.7□□□□□ -3
snR40snR40 ASR1Q06834 288 aa-3.7□□□□□ -3
snR40snR40 YDR262WQ12331 272 aa-3.7□□□□□ -3
snR40snR40 UBR1P19812 1950 aa-3.71□□□□□ -3
Retrieved 100 of 5,963 RNA–protein pairs in 267.1 ms