RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W MRX8Q05473 314 aa3.72□□□□□ -1.81
RRP40YOL142W SYC1Q08553 188 aaPredicted RBP3.72□□□□□ -1.81
RRP40YOL142W FRE6Q12473 712 aa3.72□□□□□ -1.81
RRP40YOL142W HTZ1Q12692 134 aaKnown RBP3.72□□□□□ -1.81
RRP40YOL142W YGL041W-AP0C5N3 154 aa3.71□□□□□ -1.82
RRP40YOL142W RPS16AP0CX51 143 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W RPS16BP0CX52 143 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W STE18P18852 110 aa3.71□□□□□ -1.82
RRP40YOL142W YGP1P38616 354 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W NVJ1P38881 321 aa3.71□□□□□ -1.82
RRP40YOL142W YER084WP40057 128 aa3.71□□□□□ -1.82
RRP40YOL142W YJL218WP40892 196 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W MKC7P53379 596 aa3.71□□□□□ -1.82
RRP40YOL142W RCE1Q03530 315 aa3.71□□□□□ -1.82
RRP40YOL142W RVB1Q03940 463 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W RRP17Q04031 235 aaPredicted RBP3.71□□□□□ -1.82
RRP40YOL142W NEJ1Q06148 342 aa3.71□□□□□ -1.82
RRP40YOL142W ATG17Q06410 417 aa3.71□□□□□ -1.82
RRP40YOL142W IPK1Q06667 281 aa3.71□□□□□ -1.82
RRP40YOL142W RTC5Q12108 567 aaKnown RBP3.71□□□□□ -1.82
RRP40YOL142W MSW1P04803 379 aa3.7□□□□□ -1.82
RRP40YOL142W COX9P07255 59 aa3.7□□□□□ -1.82
RRP40YOL142W PRB1P09232 635 aa3.7□□□□□ -1.82
RRP40YOL142W MRP1P10662 321 aaKnown RBP3.7□□□□□ -1.82
RRP40YOL142W PRE7P23724 241 aaKnown RBP3.7□□□□□ -1.82
RRP40YOL142W MEK1P24719 497 aaPredicted RBP3.7□□□□□ -1.82
RRP40YOL142W FUN26P31381 517 aa3.7□□□□□ -1.82
RRP40YOL142W ARO7P32178 256 aa3.7□□□□□ -1.82
RRP40YOL142W TOA2P32774 122 aa3.7□□□□□ -1.82
RRP40YOL142W YKR015CP36111 568 aa3.7□□□□□ -1.82
RRP40YOL142W YBR096WP38256 230 aa3.7□□□□□ -1.82
RRP40YOL142W PEX32P38292 413 aa3.7□□□□□ -1.82
RRP40YOL142W DDI1P40087 428 aa3.7□□□□□ -1.82
RRP40YOL142W AVT7P40501 490 aa3.7□□□□□ -1.82
RRP40YOL142W PAM16P42949 149 aa3.7□□□□□ -1.82
RRP40YOL142W MOB2P43563 287 aa3.7□□□□□ -1.82
RRP40YOL142W EFM3P47163 339 aa3.7□□□□□ -1.82
RRP40YOL142W CCC1P47818 322 aa3.7□□□□□ -1.82
RRP40YOL142W SIP18P50263 79 aa3.7□□□□□ -1.82
RRP40YOL142W PAU12P53343 120 aa3.7□□□□□ -1.82
RRP40YOL142W MEH1Q02205 184 aa3.7□□□□□ -1.82
RRP40YOL142W RPL6AQ02326 176 aaKnown RBP3.7□□□□□ -1.82
RRP40YOL142W MAK3Q03503 176 aa3.7□□□□□ -1.82
RRP40YOL142W RCF1Q03713 159 aa3.7□□□□□ -1.82
RRP40YOL142W YMR252CQ04814 134 aa3.7□□□□□ -1.82
RRP40YOL142W MCT1Q12283 360 aa3.7□□□□□ -1.82
RRP40YOL142W URA2P07259 2214 aaKnown RBP3.69□□□□□ -1.82
RRP40YOL142W QCR7P00128 127 aa3.69□□□□□ -1.82
RRP40YOL142W SPS100P13130 326 aa3.69□□□□□ -1.82
RRP40YOL142W ZRC1P20107 442 aa3.69□□□□□ -1.82
RRP40YOL142W KRR1P25586 316 aaPredicted RBP3.69□□□□□ -1.82
RRP40YOL142W TIR2P33890 251 aa3.69□□□□□ -1.82
RRP40YOL142W PAU24P38155 120 aa3.69□□□□□ -1.82
RRP40YOL142W GPI18P38211 433 aa3.69□□□□□ -1.82
RRP40YOL142W GEP4P38812 185 aa3.69□□□□□ -1.82
RRP40YOL142W YMR144WP40214 342 aaKnown RBP3.69□□□□□ -1.82
RRP40YOL142W FMC1P40491 155 aa3.69□□□□□ -1.82
RRP40YOL142W YAE1P47118 141 aaPredicted RBP3.69□□□□□ -1.82
RRP40YOL142W YDR391CQ04170 232 aa3.69□□□□□ -1.82
RRP40YOL142W NNT1Q05874 261 aa3.69□□□□□ -1.82
RRP40YOL142W YEL009C-AA0A023PZF2 135 aa3.68□□□□□ -1.82
RRP40YOL142W COX5BP00425 151 aa3.68□□□□□ -1.82
RRP40YOL142W SIR2P06700 562 aa3.68□□□□□ -1.82
RRP40YOL142W MRPS28P21771 286 aa3.68□□□□□ -1.82
RRP40YOL142W DOA4P32571 926 aa3.68□□□□□ -1.82
RRP40YOL142W ZRT3P34240 503 aa3.68□□□□□ -1.82
RRP40YOL142W FRM2P37261 193 aa3.68□□□□□ -1.82
RRP40YOL142W FMP23P38231 175 aa3.68□□□□□ -1.82
RRP40YOL142W GDS1P41913 522 aa3.68□□□□□ -1.82
RRP40YOL142W LOH1P47055 219 aa3.68□□□□□ -1.82
RRP40YOL142W ABM1P47146 123 aa3.68□□□□□ -1.82
RRP40YOL142W RBL2P48606 106 aaKnown RBP3.68□□□□□ -1.82
RRP40YOL142W YPS5P53057 165 aa3.68□□□□□ -1.82
RRP40YOL142W YGL204CP53089 101 aa3.68□□□□□ -1.82
RRP40YOL142W YIP5P53108 310 aa3.68□□□□□ -1.82
RRP40YOL142W HHT1P61830 136 aa3.68□□□□□ -1.82
RRP40YOL142W GRX3Q03835 250 aa3.68□□□□□ -1.82
RRP40YOL142W GAL83Q04739 417 aa3.68□□□□□ -1.82
RRP40YOL142W FIT3Q08907 204 aa3.68□□□□□ -1.82
RRP40YOL142W YPR1Q12458 312 aa3.68□□□□□ -1.82
RRP40YOL142W ADK1P07170 222 aaKnown RBP3.67□□□□□ -1.82
RRP40YOL142W TAL1P15019 335 aaKnown RBP3.67□□□□□ -1.82
RRP40YOL142W AHC2P25649 128 aa3.67□□□□□ -1.82
RRP40YOL142W RPS5P26783 225 aaKnown RBP3.67□□□□□ -1.82
RRP40YOL142W CLG1P35190 452 aa3.67□□□□□ -1.82
RRP40YOL142W MRPS9P38120 278 aa3.67□□□□□ -1.82
RRP40YOL142W YGR018CP53211 109 aa3.67□□□□□ -1.82
RRP40YOL142W AAH1P53909 347 aa3.67□□□□□ -1.82
RRP40YOL142W NMA1Q06178 401 aaKnown RBP3.67□□□□□ -1.82
RRP40YOL142W GAT3Q07928 141 aa3.67□□□□□ -1.82
RRP40YOL142W YLR099W-AQ3E798 87 aa3.67□□□□□ -1.82
RRP40YOL142W ADH1P00330 348 aaKnown RBP3.66□□□□□ -1.82
RRP40YOL142W DSF1P0CX08 502 aa3.66□□□□□ -1.82
RRP40YOL142W YNR073CP0CX09 502 aa3.66□□□□□ -1.82
RRP40YOL142W MATALPHA1P0CY06 175 aa3.66□□□□□ -1.82
RRP40YOL142W HMLALPHA1P0CY07 175 aa3.66□□□□□ -1.82
RRP40YOL142W RPL24BP24000 155 aaKnown RBP3.66□□□□□ -1.82
RRP40YOL142W RPL5P26321 297 aaKnown RBP3.66□□□□□ -1.82
RRP40YOL142W ERG24P32462 438 aaKnown RBP3.66□□□□□ -1.82
RRP40YOL142W PAU2P32612 120 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms