RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	MNL1	P38888	796 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	BDH1	P39714	382 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	YGL235W	P53071	178 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	SCW4	P53334	386 aa	Known RBP	4.41	□□□□□ -1.7
PAL1	YDR348C	YMR206W	Q03695	313 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	MCH1	Q07376	486 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	PAU23	Q07987	124 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	FRE7	Q12333	620 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	PAU17	Q12370	124 aa		4.41	□□□□□ -1.7
PAL1	YDR348C	MSB2	P32334	1306 aa		4.4	□□□□□ -1.7
PAL1	YDR348C	POR1	P04840	283 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	QCR2	P07257	368 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	YPR170W-B	P0C5R9	85 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	ARF2	P19146	181 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	RPB5	P20434	215 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	CPR2	P23285	205 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	ERG3	P32353	365 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
PAL1	YDR348C	TCA17	P32613	152 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	UTR5	P32630	166 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	REC104	P33323	182 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	HMT1	P38074	348 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	POA1	P38218	177 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	HSP10	P38910	106 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	RPL13B	P40212	199 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	BTT1	P40314	149 aa	Predicted RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	BUD8	P41698	603 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	TRM9	P49957	279 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	HSV2	P50079	448 aa	Predicted RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	FLC3	P53121	802 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	SGF73	P53165	657 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	PAU4	P53427	120 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	DIG2	Q03373	323 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	CCE1	Q03702	353 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	CGI121	Q03705	181 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	YAP6	Q03935	383 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	YMR082C	Q04276	118 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	TMN2	Q04562	672 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	RTN1	Q04947	295 aa	Known RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	YDL242W	Q07746	117 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	YPL257W	Q08974	193 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	SME1	Q12330	94 aa	Predicted RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	ERP4	Q12450	207 aa		4.4	□□□□□ -1.71
PAL1	YDR348C	RPL13A	Q12690	199 aa	Predicted RBP	4.4	□□□□□ -1.71
PAL1	YDR348C	PAU1	P0CE88	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU14	P0CE89	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU6	P0CE90	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU18	P0CE91	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU8	P0CE92	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU11	P0CE93	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	CPR1	P14832	162 aa	Known RBP	4.39	□□□□□ -1.71
PAL1	YDR348C	ADK2	P26364	225 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	RFA2	P26754	273 aa	Known RBP	4.39	□□□□□ -1.71
PAL1	YDR348C	TIM12	P32830	109 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	TRS65	P32893	560 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	AUR1	P36107	401 aa	Predicted RBP	4.39	□□□□□ -1.71
PAL1	YDR348C	PRY2	P36110	329 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU13	P38725	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	RPP1	P38786	293 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	TVP23	P38962	199 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	GIM4	P40005	111 aa	Known RBP	4.39	□□□□□ -1.71
PAL1	YDR348C	YIL067C	P40514	678 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	TAF4	P50105	388 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	HHT1	P61830	136 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU10	Q03050	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	THI74	Q04083	370 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU20	Q08322	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
PAL1	YDR348C	FCY22	Q12119	530 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	PAU9	Q3E770	120 aa		4.39	□□□□□ -1.71
PAL1	YDR348C	MSW1	P04803	379 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	YSR3	P23501	404 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	CWP1	P28319	239 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	ARO4	P32449	370 aa	Known RBP	4.38	□□□□□ -1.71
PAL1	YDR348C	MIX23	P38162	196 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	VBA2	P38358	474 aa	Known RBP	4.38	□□□□□ -1.71
PAL1	YDR348C	GPP1	P41277	250 aa	Known RBP	4.38	□□□□□ -1.71
PAL1	YDR348C	MIC26	P50087	233 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	RIB4	P50861	169 aa	Predicted RBP	4.38	□□□□□ -1.71
PAL1	YDR348C	YLR152C	P54072	576 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	MRX8	Q05473	314 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	ATG39	Q06159	398 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	STP4	Q07351	490 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	TPT1	Q12272	230 aa	Known RBP	4.38	□□□□□ -1.71
PAL1	YDR348C	MCT1	Q12283	360 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	YDR262W	Q12331	272 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	COA2	Q3E823	68 aa		4.38	□□□□□ -1.71
PAL1	YDR348C	SAL1	D6W196	494 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	RPS13	P05756	151 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	MAK32	P23060	363 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	PMU1	P36069	295 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	DOG1	P38774	246 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	RPF1	P38805	295 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	YEL057C	P39983	233 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	SMD3	P43321	101 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	HIT1	P46973	164 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	RPN14	P53196	417 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	ERG26	P53199	349 aa	Known RBP	4.37	□□□□□ -1.71
PAL1	YDR348C	YGR017W	P53210	297 aa		4.37	□□□□□ -1.71
PAL1	YDR348C	THG1	P53215	237 aa	Known RBP	4.37	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms