RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	TRM112	P53738	135 aa	Predicted RBP	4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	TY1A-MR1	Q04215	440 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	AVO2	Q04749	426 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	NAT5	Q08689	176 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	TY1A-BL	Q12266	440 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	Q0010	Q9ZZX9	128 aa		4.11	□□□□□ -1.75
YDR261C-D	YDR261C-D	AI3	P03877	415 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YMR31	P19955	123 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	BET2	P20133	325 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	HSP12	P22943	109 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	PEX31	P53203	462 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	SNA2	P56508	79 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	HSP33	Q08914	237 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	PEX11	Q12462	236 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YFR010W-A	P0C5N0	62 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	CTS1	P29029	562 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	SOR1	P35497	357 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	AIM34	Q03673	198 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	SOR2	Q07786	357 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YRA1	Q12159	226 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	HBN1	Q96VH4	193 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	VPS63	O13549	108 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	CDC21	P06785	304 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	MRPL20	P22354	195 aa	Predicted RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	RRP4	P38792	359 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YIL165C	P40446	119 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	BIT61	P47041	543 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	ELP3	Q02908	557 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YDR209C	Q03480	137 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	DCG1	P32460	244 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	SCO2	P38072	301 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	NRG2	P38082	220 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	SDS24	P38314	527 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YJL193W	P39542	402 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	GLE2	P40066	365 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	CPD1	P53314	239 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	RNH201	P53942	307 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	YDR042C	Q03205	200 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	ARC18	Q05933	178 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	GLO4	Q12320	285 aa		4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	UTP23	Q12339	254 aa	Known RBP	4.1	□□□□□ -1.75
YDR261C-D	YDR261C-D	NUP159	P40477	1460 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	MRS1	P07266	363 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	TFS1	P14306	219 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	PPH21	P23594	369 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	TOA2	P32774	122 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	ECM33	P38248	429 aa	Known RBP	4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	PHO88	P38264	188 aa	Predicted RBP	4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YBR285W	P38354	144 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YEL020C	P39994	560 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YIL054W	P40524	105 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	SMD3	P43321	101 aa	Known RBP	4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YDR261C-D	YDR261C-D	DFG5	Q05031	458 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	PIN3	Q06449	215 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	STU1	P38198	1513 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	CYT1	P07143	309 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	CDC20	P26309	610 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	TIM23	P32897	222 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	SNF11	P38956	169 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YER134C	P40081	178 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	LCB2	P40970	561 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	POP1	P41812	875 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	GPI2	P46961	280 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	PFA5	Q03289	374 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	FMN1	Q03778	218 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YMR155W	Q03795	547 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	ENV7	Q12003	364 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	ATG41	Q12048	136 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	MCT1	Q12283	360 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YBL112C	Q3E7Y4	105 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	YPK9	Q12697	1472 aa		4.09	□□□□□ -1.75
YDR261C-D	YDR261C-D	CPT1	P17898	393 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	MSS51	P32335	436 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	IMP3	P32899	183 aa	Predicted RBP	4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	PCL5	P38794	229 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	SMM1	P53720	384 aa	Known RBP	4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	YMR181C	Q03231	154 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	YPR022C	Q12139	1133 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	CWP1	P28319	239 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	GPI18	P38211	433 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	OST2	P46964	130 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	BAT2	P47176	376 aa	Known RBP	4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	MTQ1	P53944	314 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	YOR015W	Q12169	119 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	AYT1	Q12226	474 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	ISD11	Q6Q560	94 aa		4.09	□□□□□ -1.76
YDR261C-D	YDR261C-D	IQG1	Q12280	1495 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	ELO2	P25358	347 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	INO2	P26798	304 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	OAC1	P32332	324 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	YJR012C	P47087	207 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	MET31	Q03081	177 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	YDL057W	Q07379	328 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	SNX3	Q08826	162 aa	Known RBP	4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	YPL162C	Q12042	273 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	MATALPHA1	P0CY06	175 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	HMLALPHA1	P0CY07	175 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	PFA4	Q12006	378 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	THO2	P53552	1597 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms