RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W PAL1Q05518 499 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W RBS1Q05672 457 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W YPR114WQ06107 315 aa3.65□□□□□ -1.83
HSP42YDR171W HEM25Q07534 307 aa3.65□□□□□ -1.83
HSP42YDR171W AKR2Q12013 749 aa3.65□□□□□ -1.83
HSP42YDR171W RPL13AQ12690 199 aaPredicted RBP3.65□□□□□ -1.83
HSP42YDR171W YDL085C-AQ3E7B7 68 aaKnown RBP3.65□□□□□ -1.83
HSP42YDR171W SCEIP03882 235 aa3.64□□□□□ -1.83
HSP42YDR171W KIN28P06242 306 aa3.64□□□□□ -1.83
HSP42YDR171W HIP1P06775 603 aa3.64□□□□□ -1.83
HSP42YDR171W STE7P06784 515 aa3.64□□□□□ -1.83
HSP42YDR171W SGA1P08019 549 aa3.64□□□□□ -1.83
HSP42YDR171W PAU19P0CE85 124 aa3.64□□□□□ -1.83
HSP42YDR171W PAU21P0CE86 164 aa3.64□□□□□ -1.83
HSP42YDR171W PAU22P0CE87 164 aa3.64□□□□□ -1.83
HSP42YDR171W SCL1P21243 252 aaKnown RBP3.64□□□□□ -1.83
HSP42YDR171W PAU3P25610 124 aa3.64□□□□□ -1.83
HSP42YDR171W POP5P28005 173 aa3.64□□□□□ -1.83
HSP42YDR171W DEG1P31115 442 aaKnown RBP3.64□□□□□ -1.83
HSP42YDR171W NTF2P33331 125 aaKnown RBP3.64□□□□□ -1.83
HSP42YDR171W SGE1P33335 543 aa3.64□□□□□ -1.83
HSP42YDR171W HMT1P38074 348 aa3.64□□□□□ -1.83
HSP42YDR171W MRPS9P38120 278 aa3.64□□□□□ -1.83
HSP42YDR171W MAL32P38158 584 aa3.64□□□□□ -1.83
HSP42YDR171W GGC1P38988 300 aa3.64□□□□□ -1.83
HSP42YDR171W KRE9P39005 276 aa3.64□□□□□ -1.83
HSP42YDR171W TIM17P39515 158 aa3.64□□□□□ -1.83
HSP42YDR171W DLS1P40366 167 aa3.64□□□□□ -1.83
HSP42YDR171W GLC8P41818 229 aa3.64□□□□□ -1.83
HSP42YDR171W MOB2P43563 287 aa3.64□□□□□ -1.83
HSP42YDR171W AVT4P50944 713 aa3.64□□□□□ -1.83
HSP42YDR171W NSA1P53136 463 aaPredicted RBP3.64□□□□□ -1.83
HSP42YDR171W MTM1P53320 366 aa3.64□□□□□ -1.83
HSP42YDR171W MAL12P53341 584 aa3.64□□□□□ -1.83
HSP42YDR171W HNT1Q04344 158 aaKnown RBP3.64□□□□□ -1.83
HSP42YDR171W SEN15Q04675 128 aa3.64□□□□□ -1.83
HSP42YDR171W RTT103Q05543 409 aa3.64□□□□□ -1.83
HSP42YDR171W YTH1Q06102 208 aaPredicted RBP3.64□□□□□ -1.83
HSP42YDR171W CTR3Q06686 241 aa3.64□□□□□ -1.83
HSP42YDR171W REX4Q08237 289 aa3.64□□□□□ -1.83
HSP42YDR171W AYT1Q12226 474 aa3.64□□□□□ -1.83
HSP42YDR171W AGC1Q12482 902 aa3.64□□□□□ -1.83
HSP42YDR171W TPI1P00942 248 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W CPA1P07258 411 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W RPL20AP0CX23 172 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W RPL20BP0CX24 172 aaPredicted RBP3.63□□□□□ -1.83
HSP42YDR171W STP22P25604 385 aa3.63□□□□□ -1.83
HSP42YDR171W AGA1P32323 725 aa3.63□□□□□ -1.83
HSP42YDR171W NRP1P32770 719 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
HSP42YDR171W SUI1P32911 108 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W SDS24P38314 527 aa3.63□□□□□ -1.83
HSP42YDR171W SHO1P40073 367 aa3.63□□□□□ -1.83
HSP42YDR171W AVT7P40501 490 aa3.63□□□□□ -1.83
HSP42YDR171W CIN5P40917 295 aa3.63□□□□□ -1.83
HSP42YDR171W OTU1P43558 301 aa3.63□□□□□ -1.83
HSP42YDR171W CIN2P46670 268 aa3.63□□□□□ -1.83
HSP42YDR171W SEH1P53011 349 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W UFD1P53044 361 aa3.63□□□□□ -1.83
HSP42YDR171W YGL262WP53054 175 aa3.63□□□□□ -1.83
HSP42YDR171W SAE3P89114 91 aa3.63□□□□□ -1.83
HSP42YDR171W CTF19Q02732 369 aa3.63□□□□□ -1.83
HSP42YDR171W CWC27Q02770 301 aa3.63□□□□□ -1.83
HSP42YDR171W MRP51Q02950 344 aa3.63□□□□□ -1.83
HSP42YDR171W RTN1Q04947 295 aaKnown RBP3.63□□□□□ -1.83
HSP42YDR171W YLR456WQ06199 204 aa3.63□□□□□ -1.83
HSP42YDR171W PIN3Q06449 215 aa3.63□□□□□ -1.83
HSP42YDR171W FDH1Q08911 376 aa3.63□□□□□ -1.83
HSP42YDR171W SRO7Q12038 1033 aa3.63□□□□□ -1.83
HSP42YDR171W YOR114WQ12219 294 aa3.63□□□□□ -1.83
HSP42YDR171W YLR146W-AQ2V2P1 62 aa3.63□□□□□ -1.83
HSP42YDR171W YNR034W-AQ3E841 98 aa3.63□□□□□ -1.83
HSP42YDR171W YIL134C-AQ45U18 67 aa3.63□□□□□ -1.83
HSP42YDR171W YPR014CQ6B0W2 109 aa3.63□□□□□ -1.83
HSP42YDR171W PET20Q99373 253 aa3.63□□□□□ -1.83
HSP42YDR171W GDH1P07262 454 aaKnown RBP3.62□□□□□ -1.83
HSP42YDR171W URA6P15700 204 aa3.62□□□□□ -1.83
HSP42YDR171W PET18P25362 215 aa3.62□□□□□ -1.83
HSP42YDR171W GEX1P25596 615 aa3.62□□□□□ -1.83
HSP42YDR171W YCR100CP25606 316 aa3.62□□□□□ -1.83
HSP42YDR171W AFG1P32317 509 aa3.62□□□□□ -1.83
HSP42YDR171W FMT1P32785 401 aa3.62□□□□□ -1.83
HSP42YDR171W MRPL11P36521 249 aaPredicted RBP3.62□□□□□ -1.83
HSP42YDR171W YBR292CP38357 123 aa3.62□□□□□ -1.83
HSP42YDR171W YPT35P38815 214 aaKnown RBP3.62□□□□□ -1.83
HSP42YDR171W IRC22P40006 225 aa3.62□□□□□ -1.83
HSP42YDR171W GAT2P40209 560 aa3.62□□□□□ -1.83
HSP42YDR171W APQ12P40532 138 aa3.62□□□□□ -1.83
HSP42YDR171W PHS1P40857 217 aa3.62□□□□□ -1.83
HSP42YDR171W YJL213WP40896 331 aa3.62□□□□□ -1.83
HSP42YDR171W SFH5P47008 294 aa3.62□□□□□ -1.83
HSP42YDR171W CCC1P47818 322 aa3.62□□□□□ -1.83
HSP42YDR171W RAD17P48581 401 aa3.62□□□□□ -1.83
HSP42YDR171W PIR1Q03178 341 aa3.62□□□□□ -1.83
HSP42YDR171W ERP1Q05359 219 aaKnown RBP3.62□□□□□ -1.83
HSP42YDR171W SNT309Q06091 175 aaPredicted RBP3.62□□□□□ -1.83
HSP42YDR171W NMA1Q06178 401 aaKnown RBP3.62□□□□□ -1.83
HSP42YDR171W FRQ1Q06389 190 aa3.62□□□□□ -1.83
HSP42YDR171W SYM1Q06563 197 aa3.62□□□□□ -1.83
HSP42YDR171W RRT7Q07829 113 aa3.62□□□□□ -1.83
HSP42YDR171W PPT2Q12036 173 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms