RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	NSL1	Q12143	216 aa		4.28	□□□□□ -1.72
SNF11	YDR073W	PRR2	Q12310	699 aa		4.28	□□□□□ -1.72
SNF11	YDR073W	ADH1	P00330	348 aa	Known RBP	4.27	□□□□□ -1.73
SNF11	YDR073W	CMD1	P06787	147 aa	Known RBP	4.27	□□□□□ -1.73
SNF11	YDR073W	SEC14	P24280	304 aa	Known RBP	4.27	□□□□□ -1.73
SNF11	YDR073W	PCL1	P24867	279 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	RCN1	P36054	211 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	YBR063C	P38083	404 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	NVJ1	P38881	321 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	YAR068W	P39564	161 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	GLE2	P40066	365 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	FIS1	P40515	155 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	ALG9	P53868	555 aa	Known RBP	4.27	□□□□□ -1.73
SNF11	YDR073W	COG5	P53951	403 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	HAL1	Q01766	294 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	MAK3	Q03503	176 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	GAS3	Q03655	524 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	IES3	Q12345	250 aa		4.27	□□□□□ -1.73
SNF11	YDR073W	SCO1	P23833	295 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	ATG22	P25568	528 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	COS8	P38723	381 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	EDC3	P39998	551 aa	Known RBP	4.26	□□□□□ -1.73
SNF11	YDR073W	IRC22	P40006	225 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	SOK1	P40317	901 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	YFL012W	P43580	148 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	RPA43	P46669	326 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	YNL010W	P53981	241 aa	Known RBP	4.26	□□□□□ -1.73
SNF11	YDR073W	AIM34	Q03673	198 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	YTH1	Q06102	208 aa	Predicted RBP	4.26	□□□□□ -1.73
SNF11	YDR073W	GEP5	Q12393	293 aa		4.26	□□□□□ -1.73
SNF11	YDR073W	YIL177C	P40434	1758 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	YJL225C	P40889	1758 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	MBF1	O14467	151 aa	Known RBP	4.25	□□□□□ -1.73
SNF11	YDR073W	ADH3	P07246	375 aa	Known RBP	4.25	□□□□□ -1.73
SNF11	YDR073W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SNF11	YDR073W	ARO7	P32178	256 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	SKG1	P36169	355 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	YGP1	P38616	354 aa	Known RBP	4.25	□□□□□ -1.73
SNF11	YDR073W	MEP2	P41948	499 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	HST4	P53688	370 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	PLP1	Q04004	230 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	TMC1	Q08422	150 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF11	YDR073W	YPL162C	Q12042	273 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	RDI1	Q12434	202 aa		4.25	□□□□□ -1.73
SNF11	YDR073W	YCR090C	P25654	182 aa	Known RBP	4.24	□□□□□ -1.73
SNF11	YDR073W	SHH4	Q06236	168 aa		4.24	□□□□□ -1.73
SNF11	YDR073W	ARR2	Q06597	130 aa		4.24	□□□□□ -1.73
SNF11	YDR073W	RIO1	Q12196	484 aa	Known RBP	4.24	□□□□□ -1.73
SNF11	YDR073W	NOT5	Q12514	560 aa	Predicted RBP	4.24	□□□□□ -1.73
SNF11	YDR073W	CCH1	P50077	2039 aa		4.24	□□□□□ -1.73
SNF11	YDR073W	AHC2	P25649	128 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	POP4	P38336	279 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	MIG2	P53035	382 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	HPT1	Q04178	221 aa	Known RBP	4.23	□□□□□ -1.73
SNF11	YDR073W	DYN3	Q04949	312 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	SPC2	Q04969	178 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	ATG39	Q06159	398 aa		4.23	□□□□□ -1.73
SNF11	YDR073W	TOM40	P23644	387 aa	Known RBP	4.22	□□□□□ -1.73
SNF11	YDR073W	CNB1	P25296	175 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	UTH1	P36135	365 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	POP7	P38291	140 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	YAP3	P38749	330 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	NQM1	P53228	333 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF11	YDR073W	COS6	P53344	381 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	YDC1	Q02896	317 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	YPR127W	Q06494	345 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	MHT1	Q12525	324 aa		4.22	□□□□□ -1.73
SNF11	YDR073W	PRM10	P42946	383 aa		4.21	□□□□□ -1.74
SNF11	YDR073W	HNT1	Q04344	158 aa	Known RBP	4.21	□□□□□ -1.74
SNF11	YDR073W	RAD10	P06838	210 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	SGA1	P08019	549 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	UTP30	P36144	274 aa	Known RBP	4.2	□□□□□ -1.74
SNF11	YDR073W	RSM25	P40496	264 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	ICE2	P40499	491 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	ECO1	P43605	281 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	ARO8	P53090	500 aa	Known RBP	4.2	□□□□□ -1.74
SNF11	YDR073W	YDR476C	Q03362	224 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	YLR031W	Q07978	186 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	YPR014C	Q6B0W2	109 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	YFR032C-B	Q8TGU2	87 aa		4.2	□□□□□ -1.74
SNF11	YDR073W	PET54	P10834	293 aa		4.19	□□□□□ -1.74
SNF11	YDR073W	BUB2	P26448	306 aa	Predicted RBP	4.19	□□□□□ -1.74
SNF11	YDR073W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SNF11	YDR073W	MRPS9	P38120	278 aa		4.19	□□□□□ -1.74
SNF11	YDR073W	PRE5	P40302	234 aa	Known RBP	4.19	□□□□□ -1.74
SNF11	YDR073W	OST2	P46964	130 aa		4.19	□□□□□ -1.74
SNF11	YDR073W	ARP3	P47117	449 aa	Known RBP	4.19	□□□□□ -1.74
SNF11	YDR073W	TSA2	Q04120	196 aa		4.19	□□□□□ -1.74
SNF11	YDR073W	DGA1	Q08650	418 aa		4.19	□□□□□ -1.74
SNF11	YDR073W	GIM4	P40005	111 aa	Known RBP	4.18	□□□□□ -1.74
SNF11	YDR073W	ARC15	P40518	154 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
SNF11	YDR073W	PFS2	P42841	465 aa	Known RBP	4.18	□□□□□ -1.74
SNF11	YDR073W	YFR045W	P43617	309 aa		4.18	□□□□□ -1.74
SNF11	YDR073W	MPA43	P53583	542 aa	Predicted RBP	4.18	□□□□□ -1.74
SNF11	YDR073W	GPI17	Q04080	534 aa		4.18	□□□□□ -1.74
SNF11	YDR073W	FCF1	Q05498	189 aa	Predicted RBP	4.18	□□□□□ -1.74
SNF11	YDR073W	YLR156W	P0CE96	114 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	YLR159W	P0CE97	114 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	YLR161W	P0CE98	114 aa		4.17	□□□□□ -1.74
SNF11	YDR073W	PET9	P18239	318 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms