RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A PGU1P47180 361 aa2.59□□□□□ -1.99
RIM1YCR028C-A YGL262WP53054 175 aa2.59□□□□□ -1.99
RIM1YCR028C-A DOC1P53068 250 aa2.59□□□□□ -1.99
RIM1YCR028C-A EMC4P53073 190 aa2.59□□□□□ -1.99
RIM1YCR028C-A FLC3P53121 802 aa2.59□□□□□ -1.99
RIM1YCR028C-A YGR018CP53211 109 aa2.59□□□□□ -1.99
RIM1YCR028C-A SYF2P53277 215 aaPredicted RBP2.59□□□□□ -1.99
RIM1YCR028C-A HHO1P53551 258 aa2.59□□□□□ -1.99
RIM1YCR028C-A FYV6P53913 173 aa2.59□□□□□ -1.99
RIM1YCR028C-A BNA7Q04066 261 aa2.59□□□□□ -1.99
RIM1YCR028C-A UTP15Q04305 513 aaKnown RBP2.59□□□□□ -1.99
RIM1YCR028C-A YMR310CQ04867 317 aaPredicted RBP2.59□□□□□ -1.99
RIM1YCR028C-A YPR127WQ06494 345 aa2.59□□□□□ -1.99
RIM1YCR028C-A ANT1Q06497 328 aa2.59□□□□□ -1.99
RIM1YCR028C-A PLB3Q08108 686 aa2.59□□□□□ -1.99
RIM1YCR028C-A YOR289WQ12012 251 aaPredicted RBP2.59□□□□□ -1.99
RIM1YCR028C-A YPR064WQ12492 139 aa2.59□□□□□ -1.99
RIM1YCR028C-A SKS1Q12505 502 aa2.59□□□□□ -1.99
RIM1YCR028C-A LAA1P39526 2014 aa2.59□□□□□ -2
RIM1YCR028C-A YSR3P23501 404 aa2.58□□□□□ -2
RIM1YCR028C-A ADE1P27616 306 aa2.58□□□□□ -2
RIM1YCR028C-A SUA5P32579 426 aa2.58□□□□□ -2
RIM1YCR028C-A MGM101P32787 269 aaKnown RBP2.58□□□□□ -2
RIM1YCR028C-A UIP5P36137 443 aa2.58□□□□□ -2
RIM1YCR028C-A MRPS9P38120 278 aa2.58□□□□□ -2
RIM1YCR028C-A SHG1P38337 142 aa2.58□□□□□ -2
RIM1YCR028C-A WSC4P38739 605 aa2.58□□□□□ -2
RIM1YCR028C-A IKI1P38874 309 aa2.58□□□□□ -2
RIM1YCR028C-A ASP1P38986 381 aaPredicted RBP2.58□□□□□ -2
RIM1YCR028C-A GCV3P39726 170 aaPredicted RBP2.58□□□□□ -2
RIM1YCR028C-A PGD1P40356 397 aa2.58□□□□□ -2
RIM1YCR028C-A TAD2P47058 250 aa2.58□□□□□ -2
RIM1YCR028C-A SNN1P48232 102 aa2.58□□□□□ -2
RIM1YCR028C-A COG7P53195 279 aa2.58□□□□□ -2
RIM1YCR028C-A FMP48P53233 369 aa2.58□□□□□ -2
RIM1YCR028C-A VHT1P53241 593 aa2.58□□□□□ -2
RIM1YCR028C-A OKP1P53298 406 aa2.58□□□□□ -2
RIM1YCR028C-A RSM27P53305 110 aa2.58□□□□□ -2
RIM1YCR028C-A SEC13Q04491 297 aaKnown RBP2.58□□□□□ -2
RIM1YCR028C-A NAT4Q04751 285 aa2.58□□□□□ -2
RIM1YCR028C-A MSC3Q05812 728 aa2.58□□□□□ -2
RIM1YCR028C-A KEI1Q06346 221 aa2.58□□□□□ -2
RIM1YCR028C-A NOC4Q06512 552 aaPredicted RBP2.58□□□□□ -2
RIM1YCR028C-A RRP40Q08285 240 aaKnown RBP2.58□□□□□ -2
RIM1YCR028C-A CMC2Q3E7A4 109 aa2.58□□□□□ -2
RIM1YCR028C-A TFB5Q3E7C1 72 aaPredicted RBP2.58□□□□□ -2
RIM1YCR028C-A PCC1Q3E833 88 aa2.58□□□□□ -2
RIM1YCR028C-A YOS9Q99220 542 aa2.58□□□□□ -2
RIM1YCR028C-A TDH2P00358 332 aaKnown RBP2.57□□□□□ -2
RIM1YCR028C-A KIN28P06242 306 aa2.57□□□□□ -2
RIM1YCR028C-A CDC7P06243 507 aa2.57□□□□□ -2
RIM1YCR028C-A ADK1P07170 222 aaKnown RBP2.57□□□□□ -2
RIM1YCR028C-A PUT1P09368 476 aa2.57□□□□□ -2
RIM1YCR028C-A IFM1P25038 676 aa2.57□□□□□ -2
RIM1YCR028C-A YOR062CP36025 268 aa2.57□□□□□ -2
RIM1YCR028C-A COS9P36034 407 aa2.57□□□□□ -2
RIM1YCR028C-A YKL162CP36052 402 aa2.57□□□□□ -2
RIM1YCR028C-A TRM7P38238 310 aaKnown RBP2.57□□□□□ -2
RIM1YCR028C-A PRS3P38689 320 aaKnown RBP2.57□□□□□ -2
RIM1YCR028C-A POG1P40473 351 aa2.57□□□□□ -2
RIM1YCR028C-A GTT1P40582 234 aa2.57□□□□□ -2
RIM1YCR028C-A SYS1P41544 203 aa2.57□□□□□ -2
RIM1YCR028C-A KEG1P43614 200 aa2.57□□□□□ -2
RIM1YCR028C-A CIN2P46670 268 aa2.57□□□□□ -2
RIM1YCR028C-A MCM22P47167 239 aa2.57□□□□□ -2
RIM1YCR028C-A ERV25P54837 211 aaKnown RBP2.57□□□□□ -2
RIM1YCR028C-A CTF19Q02732 369 aa2.57□□□□□ -2
RIM1YCR028C-A YPL113CQ02961 396 aa2.57□□□□□ -2
RIM1YCR028C-A YMR252CQ04814 134 aa2.57□□□□□ -2
RIM1YCR028C-A NNT1Q05874 261 aa2.57□□□□□ -2
RIM1YCR028C-A GAS2Q06135 555 aa2.57□□□□□ -2
RIM1YCR028C-A MCH1Q07376 486 aa2.57□□□□□ -2
RIM1YCR028C-A YPD1Q07688 167 aa2.57□□□□□ -2
RIM1YCR028C-A VPS68Q12016 184 aa2.57□□□□□ -2
RIM1YCR028C-A FCF2Q12035 217 aaPredicted RBP2.57□□□□□ -2
RIM1YCR028C-A YOR114WQ12219 294 aa2.57□□□□□ -2
RIM1YCR028C-A MCT1Q12283 360 aa2.57□□□□□ -2
RIM1YCR028C-A HMS1Q12398 434 aa2.57□□□□□ -2
RIM1YCR028C-A ECM29P38737 1868 aa2.56□□□□□ -2
RIM1YCR028C-A PBN1P25580 416 aa2.56□□□□□ -2
RIM1YCR028C-A VMA5P31412 392 aaKnown RBP2.56□□□□□ -2
RIM1YCR028C-A EMP24P32803 203 aaKnown RBP2.56□□□□□ -2
RIM1YCR028C-A SRY1P36007 326 aa2.56□□□□□ -2
RIM1YCR028C-A PAN3P36102 679 aaPredicted RBP2.56□□□□□ -2
RIM1YCR028C-A MAL32P38158 584 aa2.56□□□□□ -2
RIM1YCR028C-A YPC1P38298 316 aa2.56□□□□□ -2
RIM1YCR028C-A SEN34P39707 275 aa2.56□□□□□ -2
RIM1YCR028C-A EMC5P40540 141 aa2.56□□□□□ -2
RIM1YCR028C-A PAM16P42949 149 aa2.56□□□□□ -2
RIM1YCR028C-A MRX5P47007 382 aa2.56□□□□□ -2
RIM1YCR028C-A CCC1P47818 322 aa2.56□□□□□ -2
RIM1YCR028C-A YGL204CP53089 101 aa2.56□□□□□ -2
RIM1YCR028C-A YGL159WP53110 370 aa2.56□□□□□ -2
RIM1YCR028C-A YGR026WP53217 278 aa2.56□□□□□ -2
RIM1YCR028C-A MAL12P53341 584 aa2.56□□□□□ -2
RIM1YCR028C-A APJ1P53940 528 aa2.56□□□□□ -2
RIM1YCR028C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RIM1YCR028C-A YMR279CQ03263 540 aa2.56□□□□□ -2
RIM1YCR028C-A GAT3Q07928 141 aa2.56□□□□□ -2
RIM1YCR028C-A YOR385WQ08909 290 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms