RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 IZUMO3Q5VZ72 239 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 FAM96AQ9H5X1 160 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 CHD1O14646 1710 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 C3orf70A6NLC5 250 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ATP5HO75947 161 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ITGA4P13612 1032 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 GGCXP38435 758 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 C6orf10Q5SRN2 563 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 C10orf53Q8N6V4 93 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ZNF555Q8NEP9 628 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 PTPRN2Q92932 1015 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ALDH1A2O94788 518 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 BRAFP15056 766 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 SCP2P22307 547 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 NR1H3Q13133 447 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 BRD8Q9H0E9 1235 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 HARS2P49590 506 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ACTR2P61160 394 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 SMARCAD1Q9H4L7 1026 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 DCP1AQ9NPI6 582 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 PRG3Q9Y2Y8 225 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 PHKG1Q16816 387 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ARHGAP17Q68EM7 881 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 SLC7A14Q8TBB6 771 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 DEPDC7Q96QD5 511 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
CACNA1A-221ENST00000636012 LRG1P02750 347 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ARFIP2P53365 341 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 MED15Q96RN5 788 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 TSC22D3Q99576 134 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 C17orf80Q9BSJ5 609 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 APOL5Q9BWW9 433 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 XPO7Q9UIA9 1087 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 L3MBTL3Q96JM7 780 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 AGBL1Q96MI9 1066 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ARHGEF38Q9NXL2 777 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 COG2Q14746 738 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 GRM4Q14833 912 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 LEMD2Q8NC56 503 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ENO1P06733 434 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 E2F4Q16254 413 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ZRANB3Q5FWF4 1079 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 MCEEQ96PE7 176 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 SLC30A1Q9Y6M5 507 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 DAB1O75553 588 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 HPCAP84074 193 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 EMBQ6PCB8 327 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 ASCC2Q9H1I8 757 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 MAN1C1Q9NR34 630 aa16.75■□□□□ 0.27
CACNA1A-221ENST00000636012 PLEKHG1Q9ULL1 1385 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 CYTH3O43739 400 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ITGAXP20702 1163 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 EFNA5P52803 228 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ATP12AP54707 1039 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 SNX17Q15036 470 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 CLEC4FQ8N1N0 589 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ZNF304Q9HCX3 659 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 SPASTQ9UBP0 616 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 SKAP2O75563 359 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ARID5BQ14865 1188 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ATP8B1O43520 1251 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 RTN2O75298 545 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 MZF1P28698 734 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ANO5Q75V66 913 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 MS4A14Q96JA4 679 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 BBS2Q9BXC9 721 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 RAB6BQ9NRW1 208 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 HAUS5O94927 633 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 CYGBQ8WWM9 190 aa16.74■□□□□ 0.27
CACNA1A-221ENST00000636012 FKBP9O95302 570 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 FKBP9P1Q75LS8 142 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 PRMT1Q99873 361 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 SH3GL3Q99963 347 aa16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 C20orf96Q9NUD7 363 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 ABI2Q9NYB9 513 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-221ENST00000636012 RBP5P82980 135 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms