RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TSHZ3Q63HK5 1081 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 TMPRSS7Q7RTY8 843 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 NLRX1Q86UT6 975 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 HOMER1Q86YM7 354 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 COLGALT2Q8IYK4 626 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 HDDC3Q8N4P3 179 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 LRRC71Q8N4P6 559 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 KBTBD3Q8NAB2 608 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 FRAT1Q92837 279 aaPredicted RBP7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 ZFYVE19Q96K21 471 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 CLSTN3Q9BQT9 956 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 NUSAP1Q9BXS6 441 aaKnown RBP7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 OXCT2Q9BYC2 517 aaPredicted RBP7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 TPSD1Q9BZJ3 242 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 JPH1Q9HDC5 661 aaPredicted RBP7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 SNTG2Q9NY99 539 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 GTSE1Q9NYZ3 720 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 HSPBP1Q9NZL4 362 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 AKT3Q9Y243 479 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 DYRK1BQ9Y463 629 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 ATG2BQ96BY7 2078 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 CREBBPQ92793 2442 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 PTPRBP23467 1997 aa7.78□□□□□ -1.16
SCAMP1-206ENST00000618166 COL6A6A6NMZ7 2263 aa7.77□□□□□ -1.16
SCAMP1-206ENST00000618166 WDR27A2RRH5 827 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 ZBTB5O15062 677 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 C1RP00736 705 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 ATP4AP20648 1035 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 HOXA9P31269 272 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 PTGER3P43115 390 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 CXADRP78310 365 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 UVSSAQ2YD98 709 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 PRSS36Q5K4E3 855 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 AXDND1Q5T1B0 1012 aaPredicted RBP7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 TWF2Q6IBS0 349 aaKnown RBP7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 USP17L6PQ6QN14 398 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 DAGLBQ8NCG7 672 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 URGCPQ8TCY9 931 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 CSGALNACT1Q8TDX6 532 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 MTMR8Q96EF0 704 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 FAM193BQ96PV7 902 aaPredicted RBP7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 FAM105AQ9NUU6 356 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 DACT1Q9NYF0 836 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 CACNG4Q9UBN1 327 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 SLC9A2Q9UBY0 812 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 ANAPC4Q9UJX5 808 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 TSC2P49815 1807 aa7.77□□□□□ -1.17
SCAMP1-206ENST00000618166 PDCD11Q14690 1871 aaKnown RBP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 HBP1O60381 514 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 OPHN1O60890 802 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 CFIP05156 583 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 GJA1P17302 382 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 ADSSP30520 456 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 MAP2K3P46734 347 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 GPC3P51654 580 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 MTMR1Q13613 665 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 ASPRV1Q53RT3 343 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 FUT10Q6P4F1 479 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 CCDC60Q8IWA6 550 aaPredicted RBP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 ABCA7Q8IZY2 2146 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 MINDY1Q8N5J2 469 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 SAMD3Q8N6K7 520 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 LINC01465Q8N7H1 131 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 FRMD1Q8N878 549 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 TNPO1Q92973 898 aaKnown RBP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 KIF1BPQ96EK5 621 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 TTC14Q96N46 770 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 APOL6Q9BWW8 343 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 C8orf33Q9H7E9 229 aaPredicted RBP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 FKBPLQ9UIM3 349 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 LRBAP50851 2863 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 MYH6P13533 1939 aa7.76□□□□□ -1.17
SCAMP1-206ENST00000618166 HEPACAM2A8MVW5 462 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 CCNE2O96020 404 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PARP1P09874 1014 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 MYF5P13349 255 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 IL12RB1P42701 662 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 DGKEP52429 567 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 ATXN3P54252 364 aaPredicted RBP7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 MLLT6P55198 1093 aaPredicted RBP7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 TNK2Q07912 1038 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 MAPK6Q16659 721 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 USP41Q3LFD5 358 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 ZNF484Q5JVG2 852 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 FSTL4Q6MZW2 842 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PDXDC1Q6P996 788 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 LRRC69Q6ZNQ3 347 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 TMC8Q8IU68 726 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 NAXDQ8IW45 347 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 MFSD6LQ8IWD5 586 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms