RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 BEST2Q8NFU1 509 aa20.95■□□□□ 0.94
TCF3-219ENST00000610756 EDAQ92838 391 aa20.95■□□□□ 0.94
TCF3-219ENST00000610756 SPATA32Q96LK8 384 aa20.95■□□□□ 0.94
TCF3-219ENST00000610756 WDR6Q9NNW5 1121 aaKnown RBP20.95■□□□□ 0.94
TCF3-219ENST00000610756 C2CD2Q9Y426 696 aa20.95■□□□□ 0.94
TCF3-219ENST00000610756 CDY1Q9Y6F8 540 aa20.95■□□□□ 0.94
TCF3-219ENST00000610756 H7C4K7 107 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 M0QZQ0 153 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 PRPF6O94906 941 aaKnown RBP20.94■□□□□ 0.94
TCF3-219ENST00000610756 PAX3P23760 479 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 MCM4P33991 863 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 ASIC1P78348 528 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 CCDC149Q6ZUS6 474 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 OTOP3Q7RTS5 596 aa20.94■□□□□ 0.94
TCF3-219ENST00000610756 SMG7Q92540 1137 aaKnown RBP20.94■□□□□ 0.94
TCF3-219ENST00000610756 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 PRR33A8MZF0 331 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 HNRNPA1P09651 372 aaKnown RBP eCLIP20.93■□□□□ 0.94
TCF3-219ENST00000610756 SLFN14P0C7P3 912 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 SP100P23497 879 aaPredicted RBP20.93■□□□□ 0.94
TCF3-219ENST00000610756 AARSP49588 968 aaKnown RBP eCLIP20.93■□□□□ 0.94
TCF3-219ENST00000610756 TMEM132DQ14C87 1099 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 UNC13DQ70J99 1090 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 NT5DC4Q86YG4 428 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 TDRD5Q8NAT2 981 aaKnown RBP20.93■□□□□ 0.94
TCF3-219ENST00000610756 ZNF461Q8TAF7 563 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 ZNF507Q8TCN5 953 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 HPS3Q969F9 1004 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 ACSF2Q96CM8 615 aaPredicted RBP20.93■□□□□ 0.94
TCF3-219ENST00000610756 SCAND2PQ9GZW5 306 aaPredicted RBP20.93■□□□□ 0.94
TCF3-219ENST00000610756 PCDHB8Q9UN66 801 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 CITO14578 2027 aa20.93■□□□□ 0.94
TCF3-219ENST00000610756 PVALEFA0A1B0GWK0 134 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 ANO9A1A5B4 782 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 ABLIM3O94929 683 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 IL18RAPO95256 599 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 NFICP08651 508 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 HOXA9P31269 272 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 GUCY2FP51841 1108 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 ZXDAP98168 799 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 EHHADHQ08426 723 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 LIN9Q5TKA1 542 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 EPM2AIP1Q7L775 607 aaPredicted RBP20.92■□□□□ 0.94
TCF3-219ENST00000610756 CEP57L1Q8IYX8 460 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 TMEM130Q8N3G9 435 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 GLIS3Q8NEA6 775 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 CHAMP1Q96JM3 812 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 FAM213AQ9BRX8 229 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 PIDD1Q9HB75 910 aa20.92■□□□□ 0.94
TCF3-219ENST00000610756 FAM86C2PA6NEL3 165 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 PIRO00625 290 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 KIAA0391O15091 583 aaKnown RBP20.91■□□□□ 0.94
TCF3-219ENST00000610756 EIF3DO15371 548 aaKnown RBP eCLIP20.91■□□□□ 0.94
TCF3-219ENST00000610756 OAZ2O95190 189 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 C8AP07357 584 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 HOXD13P35453 343 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 LILRA4P59901 499 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 PTPN21Q16825 1174 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 PPM1LQ5SGD2 360 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 C9orf57Q5W0N0 161 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 CBWD1Q9BRT8 395 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 OXCT2Q9BYC2 517 aaPredicted RBP20.91■□□□□ 0.94
TCF3-219ENST00000610756 BLZF1Q9H2G9 400 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 LIMD1Q9UGP4 676 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 USP25Q9UHP3 1055 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 FBXL5Q9UKA1 691 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
TCF3-219ENST00000610756 A0A1B0GVL5 298 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 EXTL3O43909 919 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 POU2F2P09086 479 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 AFMP43652 599 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 CUL4BQ13620 913 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 CTXN3Q4LDR2 81 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 FAM26FQ5R3K3 315 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 SAAL1Q96ER3 474 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 DPP3Q9NY33 737 aa20.9■□□□□ 0.94
TCF3-219ENST00000610756 VWA8A3KMH1 1905 aa20.89■□□□□ 0.94
TCF3-219ENST00000610756 FAM237AA0A1B0GTK4 181 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 PPEF2O14830 753 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 ACTN4O43707 911 aaKnown RBP20.89■□□□□ 0.93
TCF3-219ENST00000610756 ATF2P15336 505 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 PFKFB1P16118 471 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 CASP1P29466 404 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 ROR1Q01973 937 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 YWHAHQ04917 246 aaPredicted RBP20.89■□□□□ 0.93
TCF3-219ENST00000610756 TPGS2Q68CL5 300 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 ZNF280DQ6N043 979 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 DSTYKQ6XUX3 929 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 TRIM67Q6ZTA4 783 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 BRSK2Q8IWQ3 736 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 ZSWIM2Q8NEG5 633 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 SLC7A14Q8TBB6 771 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 PAGE5Q96GU1 130 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 PCIF1Q9H4Z3 704 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.89■□□□□ 0.936e-18■■■■■ 61.4
TCF3-219ENST00000610756 MAFFQ9ULX9 164 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 CLUHO75153 1309 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 PLXNA3P51805 1871 aa20.89■□□□□ 0.93
TCF3-219ENST00000610756 WDR27A2RRH5 827 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms