RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 PPP1R13BQ96KQ4 1090 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 HAUS4Q9H6D7 363 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 NOC2LQ9Y3T9 749 aaKnown RBP13.7□□□□□ -0.22
ZNF548-210ENST00000600442 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
ZNF548-210ENST00000600442 SIP14410 1827 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 KIAA0355O15063 1070 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 CHRNA1P02708 482 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 CLTBP09497 229 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 ITGA4P13612 1032 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 PDE6CP51160 858 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 CUL2Q13617 745 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 SLC18A3Q16572 532 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 IFI16Q16666 785 aaKnown RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 SLC10A6Q3KNW5 377 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF667Q5HYK9 610 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 SNTG2Q9NY99 539 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
ZNF548-210ENST00000600442 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
ZNF548-210ENST00000600442 FOXN3O00409 490 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-210ENST00000600442 PQBP1O60828 265 aaKnown RBP13.68□□□□□ -0.22
ZNF548-210ENST00000600442 LRRN2O75325 713 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 ASS1P00966 412 aaKnown RBP13.68□□□□□ -0.22
ZNF548-210ENST00000600442 CKBP12277 381 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 RAG1P15918 1043 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 PNPLA4P41247 253 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 MAGEA1P43355 309 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 MGAT3Q09327 533 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 DPY19L2P1Q6NXN4 242 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 IRF2BP2Q7Z5L9 587 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF677Q86XU0 584 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 FAM71AQ8IYT1 594 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 CEP120Q8N960 986 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 TMEM40Q8WWA1 233 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 SHC3Q92529 594 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
ZNF548-210ENST00000600442 SNX27Q96L92 541 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 RPS6KC1Q96S38 1066 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 DESI2Q9BSY9 194 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 DPP3Q9NY33 737 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 PAXBP1Q9Y5B6 917 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 PCDHB2Q9Y5E7 798 aa13.68□□□□□ -0.22
ZNF548-210ENST00000600442 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 RECQL4O94761 1208 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 LCA5LO95447 670 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 STAU1O95793 577 aaKnown RBP13.67□□□□□ -0.22
ZNF548-210ENST00000600442 TNNT1P13805 278 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 KCNE1P15382 129 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 SELPP16109 830 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 CYP3A5P20815 502 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 PAX3P23760 479 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 VAV2P52735 878 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 TNNC1P63316 161 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 APBA1Q02410 837 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 FPGSQ05932 587 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 MTF1Q14872 753 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 GRIN2CQ14957 1233 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 CCDC122Q5T0U0 273 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
ZNF548-210ENST00000600442 CYP3A43Q9HB55 503 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 TMEM39AQ9NV64 488 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
ZNF548-210ENST00000600442 CNTN3Q9P232 1028 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms