RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CD300LGQ6UXG3 332 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 TRAPPC11Q7Z392 1133 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 C3orf58Q8NDZ4 430 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 VN1R3Q9BXE9 311 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 NAT10Q9H0A0 1025 aaKnown RBP20.67■□□□□ 0.9
DDX39A-214ENST00000590556 LMAN2LQ9H0V9 348 aa20.67■□□□□ 0.9
DDX39A-214ENST00000590556 SF3B1O75533 1304 aaKnown RBP eCLIP20.67■□□□□ 0.95e-11■■■■■ 51.7
DDX39A-214ENST00000590556 TRAPPC3O43617 180 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 PHACTR2O75167 634 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 KRT19P08727 400 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 POLR2BP30876 1174 aaKnown RBP20.66■□□□□ 0.9
DDX39A-214ENST00000590556 MCCD1P59942 119 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-214ENST00000590556 RBP5P82980 135 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 ELAVL2Q12926 359 aaKnown RBP20.66■□□□□ 0.9
DDX39A-214ENST00000590556 C1orf220Q5T0J3 134 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 TCERG1LQ5VWI1 586 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 VPS52Q8N1B4 723 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 ENOX1Q8TC92 643 aaKnown RBP20.66■□□□□ 0.9
DDX39A-214ENST00000590556 GAS2L1Q99501 681 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-214ENST00000590556 FUCA2Q9BTY2 467 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 GPR62Q9BZJ7 368 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 TLR9Q9NR96 1032 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 AGAP1Q9UPQ3 857 aa20.66■□□□□ 0.9
DDX39A-214ENST00000590556 STX10O60499 249 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 CSPG5O95196 566 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 EFEMP2O95967 443 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 SOD2P04179 222 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 BRCC3P46736 316 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 BIRC3Q13489 604 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 DCAF17Q5H9S7 520 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-214ENST00000590556 TAS1R1Q7RTX1 841 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 CXorf38Q8TB03 319 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 MICAL1Q8TDZ2 1067 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 CDX2Q99626 313 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-214ENST00000590556 THAP9Q9H5L6 903 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 MTMR10Q9NXD2 777 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 SIX4Q9UIU6 781 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 TRANK1O15050 2925 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 SCN1AP35498 2009 aa20.65■□□□□ 0.9
DDX39A-214ENST00000590556 I3L4J1 428 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 C4BPAP04003 597 aaKnown RBP20.64■□□□□ 0.89
DDX39A-214ENST00000590556 PAX3P23760 479 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 GTF2H1P32780 548 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 PNPLA4P41247 253 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 GCLMP48507 274 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 TAF6P49848 677 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 LILRA4P59901 499 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 ERVFC1P60507 584 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 PPP3CAQ08209 521 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 TRPC3Q13507 836 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 CAMK1Q14012 370 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
DDX39A-214ENST00000590556 USP41Q3LFD5 358 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 FAM171A1Q5VUB5 890 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 TDRD10Q5VZ19 366 aaKnown RBP20.64■□□□□ 0.89
DDX39A-214ENST00000590556 TMC7Q7Z402 723 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 CREBRFQ8IUR6 639 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 FAM114A1Q8IWE2 563 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 LRRC52Q8N7C0 313 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 MRPL38Q96DV4 380 aaKnown RBP20.64■□□□□ 0.89
DDX39A-214ENST00000590556 CNOT6LQ96LI5 555 aaKnown RBP20.64■□□□□ 0.89
DDX39A-214ENST00000590556 ZNF560Q96MR9 790 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 GUCD1Q96NT3 240 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 TCF25Q9BQ70 676 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 HERC2P3Q9BVR0 1158 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 MMRN2Q9H8L6 949 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 ENTPD7Q9NQZ7 604 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 NFE2L3Q9Y4A8 694 aa20.64■□□□□ 0.89
DDX39A-214ENST00000590556 IGFBP4P22692 258 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 MARSP56192 900 aaKnown RBP20.63■□□□□ 0.89
DDX39A-214ENST00000590556 ADGRE1Q14246 886 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 ZACNQ401N2 412 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 SV2CQ496J9 727 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 TIGD5Q53EQ6 642 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 SCARA3Q6AZY7 606 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 PDE12Q6L8Q7 609 aaKnown RBP20.63■□□□□ 0.89
DDX39A-214ENST00000590556 KIAA1841Q6NSI8 718 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 DSTYKQ6XUX3 929 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 SV2AQ7L0J3 742 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 RNF168Q8IYW5 571 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-214ENST00000590556 MYLIPQ8WY64 445 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 SUSD3Q96L08 255 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 ZBP1Q9H171 429 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 TMEM8AQ9HCN3 771 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 NGRNQ9NPE2 291 aaKnown RBP20.63■□□□□ 0.89
DDX39A-214ENST00000590556 LMCD1Q9NZU5 365 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 MAGEC2Q9UBF1 373 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-214ENST00000590556 MYO7AQ13402 2215 aa20.63■□□□□ 0.89
DDX39A-214ENST00000590556 FSCN2O14926 492 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 SPTLC1O15269 473 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 CXCL14O95715 111 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 CST3P01034 146 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-214ENST00000590556 CTSAP10619 480 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 IRS1P35568 1242 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 GLUD2P49448 558 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 MYL5Q02045 173 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 MYO1EQ12965 1108 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 PLPP4Q5VZY2 271 aa20.62■□□□□ 0.89
DDX39A-214ENST00000590556 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms