RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ZBTB10Q96DT7 871 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 NT5C1BQ96P26 610 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 GAS2L1Q99501 681 aaPredicted RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 POP1Q99575 1024 aaKnown RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 PACSIN1Q9BY11 444 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 OSBPL7Q9BZF2 842 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 SUGCTQ9HAC7 445 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 RAB20Q9NX57 234 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 RBAKQ9NYW8 714 aaPredicted RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 ANKFY1Q9P2R3 1169 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 ADAMTS1Q9UHI8 967 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 PCDHGC5Q9Y5F6 944 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 PCDHA11Q9Y5I1 949 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 MYH10P35580 1976 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 NRCAMQ92823 1304 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 RFXAPO00287 272 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 FOXN3O00409 490 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 OGTO15294 1046 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 TLL1O43897 1013 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 MOCS3O95396 460 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PARNO95453 639 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 VNN1O95497 513 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 CA3P07451 260 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 DLATP10515 647 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 KLRC1P26715 233 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PHKA2P46019 1235 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 ACOT2P49753 483 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 WDR5P61964 334 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 DEFB103AP81534 67 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PPFIA1Q13136 1202 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 ARHGAP44Q17R89 818 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 TDRD10Q5VZ19 366 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 ALKBH5Q6P6C2 394 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 MPZL3Q6UWV2 235 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS25-205ENST00000590339 ENOSF1Q7L5Y1 443 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 SRGAP1Q7Z6B7 1085 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 RHPN2Q8IUC4 686 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 MNS1Q8NEH6 495 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PHOSPHO2Q8TCD6 241 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 FAM81BQ96LP2 452 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 ALS2CR12Q96Q35 445 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 SLC9A7Q96T83 725 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 MINDY3Q9H8M7 445 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 IFT122Q9HBG6 1241 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PDE11AQ9HCR9 933 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 UBE2TQ9NPD8 197 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 PRMT7Q9NVM4 692 aaPredicted RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 NOCTQ9UK39 431 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 CPSF3Q9UKF6 684 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 TNFSF13BQ9Y275 285 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 PDCD11Q14690 1871 aaKnown RBP10.12□□□□□ -0.79
VPS25-205ENST00000590339 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
VPS25-205ENST00000590339 KAT6AQ92794 2004 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ABHD14A-ACY1A0A1B0GW23 586 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 DLL1O00548 723 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 CLDN3O15551 220 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 BAIAP3O94812 1187 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 CXCL10P02778 98 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 SRGAP2CP0DJJ0 459 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 AP3M2P53677 418 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 MFAP3P55082 362 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ADAM17P78536 824 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 POU5F1Q01860 360 aaKnown RBP10.11□□□□□ -0.79
VPS25-205ENST00000590339 PRPF4BQ13523 1007 aaKnown RBP10.11□□□□□ -0.79
VPS25-205ENST00000590339 ADGRE1Q14246 886 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ELF2Q15723 593 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 GRIK4Q16099 956 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
VPS25-205ENST00000590339 MARCH8Q5T0T0 291 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ATF7IP2Q5U623 682 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 EEF1DP3Q658K8 133 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 RUFY4Q6ZNE9 571 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ZNF572Q7Z3I7 529 aaPredicted RBP10.11□□□□□ -0.79
VPS25-205ENST00000590339 WDR49Q8IV35 697 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS25-205ENST00000590339 MICALL1Q8N3F8 863 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 UBR7Q8N806 425 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 CEP112Q8N8E3 955 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 EPS8L1Q8TE68 723 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 DNAJB3Q8WWF6 145 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 ARNTL2Q8WYA1 636 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 FAM84AQ96KN4 292 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 NLRP4Q96MN2 994 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 NOX5Q96PH1 765 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 FNBP1Q96RU3 617 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS25-205ENST00000590339 FAM49AQ9H0Q0 323 aaPredicted RBP10.11□□□□□ -0.79
VPS25-205ENST00000590339 CDT1Q9H211 546 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 SNX12Q9UMY4 172 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 JRKLQ9Y4A0 524 aa10.11□□□□□ -0.79
VPS25-205ENST00000590339 LCHNA4D1U4 455 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 MBLAC1A4D2B0 266 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms