RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 LMBRD2Q68DH5 695 aaPredicted RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 TMEM270Q6UE05 265 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 PALB2Q86YC2 1186 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 NME8Q8N427 588 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 OR5B17Q8NGF7 314 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 NPLOC4Q8TAT6 608 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 USP6NLQ92738 828 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 MS4A14Q96JA4 679 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 GCOM2Q9BZD3 368 aaPredicted RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 UBXN6Q9BZV1 441 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 CDT1Q9H211 546 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS25-203ENST00000589520 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 COG5Q9UP83 839 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 DERAQ9Y315 318 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 ZNF236Q9UL36 1845 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 A0A087WZ62 844 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 MYO1FO00160 1098 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ERLIN2O94905 339 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 CALB1P05937 261 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 PAEPP09466 180 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 STAG3L1P0CL83 205 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 GNAT1P11488 350 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 GBP1P32455 592 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 TNFSF9P41273 254 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 WNT7BP56706 349 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 RWDD2BP57060 319 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 CBX1P83916 185 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 TFAMQ00059 246 aaKnown RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 TAP1Q03518 808 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 PTP4A2Q12974 167 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 AMHR2Q16671 573 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 SEL1L2Q5TEA6 688 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 KIAA0319LQ8IZA0 1049 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 TMEM35BQ8NCS4 154 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 AENQ8WTP8 325 aaKnown RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 CAVIN3Q969G5 261 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 KRT12Q99456 494 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 FDXACB1Q9BRP7 624 aaPredicted RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 MTMR12Q9C0I1 747 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 DNAI2Q9GZS0 605 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 AP5M1Q9H0R1 490 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 MTUS1Q9ULD2 1270 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 NOC2LQ9Y3T9 749 aaKnown RBP11.09□□□□□ -0.63
VPS25-203ENST00000589520 CEP83Q9Y592 693 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
VPS25-203ENST00000589520 MYH10P35580 1976 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 GPR25O00155 361 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 THAP12O43422 761 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 SPOPO43791 374 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 SASH3O75995 380 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 F2P00734 622 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 COMTP21964 271 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 CDH5P33151 784 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 MAN1A1P33908 653 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 GRM5P41594 1212 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 MYL6P60660 151 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 RBP5P82980 135 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 DHX34Q14147 1143 aaKnown RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 MESDQ14696 234 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 TMEM63BQ5T3F8 832 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 ALS2CLQ60I27 953 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 IFNL1Q8IU54 200 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms